RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ADRA2BP18089 450 aa11.14□□□□□ -0.63
SPARC-208ENST00000538026 HMGB2P26583 209 aaKnown RBP11.14□□□□□ -0.63
SPARC-208ENST00000538026 EIF5P55010 431 aaKnown RBP11.14□□□□□ -0.63
SPARC-208ENST00000538026 RIPK4P57078 832 aa11.14□□□□□ -0.63
SPARC-208ENST00000538026 FKBP8Q14318 412 aa11.14□□□□□ -0.63
SPARC-208ENST00000538026 POLD1P28340 1107 aa11.13□□□□□ -0.63
SPARC-208ENST00000538026 FMNL2Q96PY5 1086 aa11.13□□□□□ -0.63
SPARC-208ENST00000538026 KIAA1551Q9HCM1 1747 aa11.12□□□□□ -0.63
SPARC-208ENST00000538026 USP42Q9H9J4 1324 aaKnown RBP11.12□□□□□ -0.63
SPARC-208ENST00000538026 NBPF26B4DH59 902 aa11.12□□□□□ -0.63
SPARC-208ENST00000538026 MMP10P09238 476 aa11.12□□□□□ -0.63
SPARC-208ENST00000538026 CANXP27824 592 aaKnown RBP11.12□□□□□ -0.63
SPARC-208ENST00000538026 RFC4P35249 363 aa11.12□□□□□ -0.63
SPARC-208ENST00000538026 PIP4K2AP48426 406 aaPredicted RBP11.12□□□□□ -0.63
SPARC-208ENST00000538026 EIF4A1P60842 406 aaKnown RBP11.12□□□□□ -0.63
SPARC-208ENST00000538026 DDR1Q08345 913 aa11.12□□□□□ -0.63
SPARC-208ENST00000538026 NBPF10Q6P3W6 841 aaKnown RBP11.12□□□□□ -0.63
SPARC-208ENST00000538026 TTC5Q8N0Z6 440 aa11.12□□□□□ -0.63
SPARC-208ENST00000538026 NBPF15Q8N660 670 aa11.12□□□□□ -0.63
SPARC-208ENST00000538026 PNISRQ8TF01 805 aaKnown RBP11.12□□□□□ -0.63
SPARC-208ENST00000538026 RUNDC1Q96C34 613 aa11.12□□□□□ -0.63
SPARC-208ENST00000538026 KIF13BQ9NQT8 1826 aa11.12□□□□□ -0.63
SPARC-208ENST00000538026 MAPK8IP3Q9UPT6 1336 aa11.11□□□□□ -0.63
SPARC-208ENST00000538026 TM4SF1P30408 202 aa11.11□□□□□ -0.63
SPARC-208ENST00000538026 PNNQ9H307 717 aaKnown RBP11.11□□□□□ -0.63
SPARC-208ENST00000538026 AFDNP55196 1824 aaKnown RBP11.1□□□□□ -0.63
SPARC-208ENST00000538026 SENP3-EIF4A1A0A087X0R7 540 aa11.1□□□□□ -0.63
SPARC-208ENST00000538026 APAF1O14727 1248 aa11.1□□□□□ -0.63
SPARC-208ENST00000538026 GIGYF1O75420 1035 aaPredicted RBP11.1□□□□□ -0.63
SPARC-208ENST00000538026 STARD3NLO95772 234 aa11.1□□□□□ -0.63
SPARC-208ENST00000538026 WDR43Q15061 677 aaKnown RBP eCLIP11.1□□□□□ -0.63
SPARC-208ENST00000538026 NEUROD2Q15784 382 aa11.1□□□□□ -0.63
SPARC-208ENST00000538026 USPL1Q5W0Q7 1092 aa11.1□□□□□ -0.63
SPARC-208ENST00000538026 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
SPARC-208ENST00000538026 NARFQ9UHQ1 456 aa11.1□□□□□ -0.63
SPARC-208ENST00000538026 COL15A1P39059 1388 aa11.1□□□□□ -0.63
SPARC-208ENST00000538026 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
SPARC-208ENST00000538026 YBX3P16989 372 aaKnown RBP eCLIP11.09□□□□□ -0.63
SPARC-208ENST00000538026 KRT24Q2M2I5 525 aa11.09□□□□□ -0.63
SPARC-208ENST00000538026 TEX13AQ9BXU3 409 aaPredicted RBP11.09□□□□□ -0.63
SPARC-208ENST00000538026 CD2APQ9Y5K6 639 aa11.09□□□□□ -0.63
SPARC-208ENST00000538026 POLRMTO00411 1230 aaKnown RBP11.08□□□□□ -0.64
SPARC-208ENST00000538026 CHL1O00533 1208 aa11.08□□□□□ -0.64
SPARC-208ENST00000538026 CAMTA2O94983 1202 aa11.08□□□□□ -0.64
SPARC-208ENST00000538026 NEFMP07197 916 aa11.08□□□□□ -0.64
SPARC-208ENST00000538026 IL6STP40189 918 aaPredicted RBP11.08□□□□□ -0.64
SPARC-208ENST00000538026 NFIXQ14938 502 aa11.08□□□□□ -0.64
SPARC-208ENST00000538026 LRP10Q7Z4F1 713 aa11.08□□□□□ -0.64
SPARC-208ENST00000538026 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
SPARC-208ENST00000538026 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
SPARC-208ENST00000538026 N4BP2Q86UW6 1770 aaPredicted RBP11.08□□□□□ -0.64
SPARC-208ENST00000538026 KCNA3P22001 575 aa11.07□□□□□ -0.64
SPARC-208ENST00000538026 LAMB4A4D0S4 1761 aa11.07□□□□□ -0.64
SPARC-208ENST00000538026 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
SPARC-208ENST00000538026 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
SPARC-208ENST00000538026 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
SPARC-208ENST00000538026 ANP32CO43423 234 aa11.06□□□□□ -0.64
SPARC-208ENST00000538026 ZNF853P0CG23 659 aa11.06□□□□□ -0.64
SPARC-208ENST00000538026 PDIA6Q15084 440 aa11.06□□□□□ -0.64
SPARC-208ENST00000538026 TBC1D9BQ66K14 1250 aa11.06□□□□□ -0.64
SPARC-208ENST00000538026 TSPYL4Q9UJ04 414 aa11.06□□□□□ -0.64
SPARC-208ENST00000538026 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
SPARC-208ENST00000538026 CHD4Q14839 1912 aa11.05□□□□□ -0.64
SPARC-208ENST00000538026 SCN7AQ01118 1682 aa11.05□□□□□ -0.64
SPARC-208ENST00000538026 ZPR1O75312 459 aa11.05□□□□□ -0.64
SPARC-208ENST00000538026 PROSER3Q2NL68 480 aa11.05□□□□□ -0.64
SPARC-208ENST00000538026 MRS2Q9HD23 443 aa11.05□□□□□ -0.64
SPARC-208ENST00000538026 BABAM1Q9NWV8 329 aa11.05□□□□□ -0.64
SPARC-208ENST00000538026 PXDNLA1KZ92 1463 aa11.05□□□□□ -0.64
SPARC-208ENST00000538026 A0A0G2JLW4 131 aa11.04□□□□□ -0.64
SPARC-208ENST00000538026 HLFQ16534 295 aa11.04□□□□□ -0.64
SPARC-208ENST00000538026 TTLL7Q6ZT98 887 aa11.04□□□□□ -0.64
SPARC-208ENST00000538026 WWC3Q9ULE0 1092 aa11.04□□□□□ -0.64
SPARC-208ENST00000538026 ZNF330Q9Y3S2 320 aaPredicted RBP11.04□□□□□ -0.64
SPARC-208ENST00000538026 ANKRD31Q8N7Z5 1873 aa11.04□□□□□ -0.64
SPARC-208ENST00000538026 CARMIL3Q8ND23 1372 aa11.03□□□□□ -0.64
SPARC-208ENST00000538026 NUP98P52948 1817 aa11.03□□□□□ -0.64
SPARC-208ENST00000538026 ANXA1P04083 346 aa11.03□□□□□ -0.64
SPARC-208ENST00000538026 DPEP1P16444 411 aa11.03□□□□□ -0.64
SPARC-208ENST00000538026 LMOD3Q0VAK6 560 aa11.03□□□□□ -0.64
SPARC-208ENST00000538026 MBIPQ9NS73 344 aa11.03□□□□□ -0.64
SPARC-208ENST00000538026 PARP3Q9Y6F1 533 aa11.03□□□□□ -0.64
SPARC-208ENST00000538026 CEP350Q5VT06 3117 aa11.03□□□□□ -0.64
SPARC-208ENST00000538026 A0A087WZG4 1122 aa11.02□□□□□ -0.65
SPARC-208ENST00000538026 SERPINB2P05120 415 aa11.02□□□□□ -0.65
SPARC-208ENST00000538026 GPR162Q16538 588 aa11.02□□□□□ -0.65
SPARC-208ENST00000538026 BICDL1Q6ZP65 573 aa11.02□□□□□ -0.65
SPARC-208ENST00000538026 DZIP3Q86Y13 1208 aaKnown RBP11.02□□□□□ -0.65
SPARC-208ENST00000538026 CCDC24Q8N4L8 307 aa11.02□□□□□ -0.65
SPARC-208ENST00000538026 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
SPARC-208ENST00000538026 LAS1LQ9Y4W2 734 aaKnown RBP11.02□□□□□ -0.65
SPARC-208ENST00000538026 CHRNA5P30532 468 aa11.01□□□□□ -0.65
SPARC-208ENST00000538026 TGFB2P61812 414 aa11.01□□□□□ -0.65
SPARC-208ENST00000538026 WWC1Q8IX03 1113 aa11.01□□□□□ -0.65
SPARC-208ENST00000538026 NGEFQ8N5V2 710 aa11.01□□□□□ -0.65
SPARC-208ENST00000538026 MYL6BP14649 208 aa11□□□□□ -0.65
SPARC-208ENST00000538026 EIF2S2P20042 333 aaKnown RBP11□□□□□ -0.65
SPARC-208ENST00000538026 CCDC27Q2M243 656 aa11□□□□□ -0.65
SPARC-208ENST00000538026 PELP1Q8IZL8 1130 aaKnown RBP11□□□□□ -0.65
SPARC-208ENST00000538026 C8orf58Q8NAV2 365 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms