RNA–Protein interactions for RNA: ENST00000536996.5

SPPL3-204, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-204ENST00000536996 CRKLP46109 303 aaKnown RBP18.78■□□□□ 0.6
SPPL3-204ENST00000536996 R3HDM1Q15032 1099 aaKnown RBP18.78■□□□□ 0.6
SPPL3-204ENST00000536996 TFCP2L1Q9NZI6 479 aa18.78■□□□□ 0.6
SPPL3-204ENST00000536996 FLAD1Q8NFF5 587 aa18.77■□□□□ 0.6
SPPL3-204ENST00000536996 CCDC87Q9NVE4 849 aa18.77■□□□□ 0.6
SPPL3-204ENST00000536996 PNPLA7Q6ZV29 1317 aa18.76■□□□□ 0.59
SPPL3-204ENST00000536996 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
SPPL3-204ENST00000536996 GNPATO15228 680 aa18.76■□□□□ 0.59
SPPL3-204ENST00000536996 SSFA2P28290 1259 aa18.76■□□□□ 0.59
SPPL3-204ENST00000536996 INTS5Q6P9B9 1019 aaKnown RBP18.76■□□□□ 0.59
SPPL3-204ENST00000536996 RPS6KA4O75676 772 aa18.75■□□□□ 0.59
SPPL3-204ENST00000536996 RTCBQ9Y3I0 505 aaKnown RBP18.75■□□□□ 0.59
SPPL3-204ENST00000536996 USP16Q9Y5T5 823 aa18.75■□□□□ 0.59
SPPL3-204ENST00000536996 NUP98P52948 1817 aa18.74■□□□□ 0.59
SPPL3-204ENST00000536996 PRAMEF22A3QJZ6 481 aa18.74■□□□□ 0.59
SPPL3-204ENST00000536996 PSDA5PKW4 1024 aaPredicted RBP18.74■□□□□ 0.59
SPPL3-204ENST00000536996 HOXB7P09629 217 aa18.74■□□□□ 0.59
SPPL3-204ENST00000536996 ADRA2BP18089 450 aa18.74■□□□□ 0.59
SPPL3-204ENST00000536996 LRP5O75197 1615 aa18.74■□□□□ 0.59
SPPL3-204ENST00000536996 SOS1Q07889 1333 aaPredicted RBP18.74■□□□□ 0.59
SPPL3-204ENST00000536996 GOLGA2Q08379 1002 aa18.73■□□□□ 0.59
SPPL3-204ENST00000536996 MYH16Q9H6N6 1097 aa18.73■□□□□ 0.59
SPPL3-204ENST00000536996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.72■□□□□ 0.59
SPPL3-204ENST00000536996 ZBTB1Q9Y2K1 713 aa18.72■□□□□ 0.59
SPPL3-204ENST00000536996 ERBB4Q15303 1308 aa18.72■□□□□ 0.59
SPPL3-204ENST00000536996 FANCIQ9NVI1 1328 aa18.72■□□□□ 0.59
SPPL3-204ENST00000536996 ANKRD36CQ5JPF3 1778 aa18.71■□□□□ 0.59
SPPL3-204ENST00000536996 IL6STP40189 918 aaPredicted RBP18.71■□□□□ 0.59
SPPL3-204ENST00000536996 HNRNPUQ00839 825 aaKnown RBP eCLIP18.71■□□□□ 0.59
SPPL3-204ENST00000536996 AMIGO3Q86WK7 504 aa18.71■□□□□ 0.59
SPPL3-204ENST00000536996 COL23A1Q86Y22 540 aaPredicted RBP18.71■□□□□ 0.59
SPPL3-204ENST00000536996 SLC16A10Q8TF71 515 aa18.71■□□□□ 0.59
SPPL3-204ENST00000536996 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
SPPL3-204ENST00000536996 COL15A1P39059 1388 aa18.7■□□□□ 0.58
SPPL3-204ENST00000536996 E9PSI1 815 aa18.7■□□□□ 0.58
SPPL3-204ENST00000536996 A1BGP04217 495 aa18.7■□□□□ 0.58
SPPL3-204ENST00000536996 KRT24Q2M2I5 525 aa18.7■□□□□ 0.58
SPPL3-204ENST00000536996 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
SPPL3-204ENST00000536996 PHF14O94880 888 aa18.69■□□□□ 0.58
SPPL3-204ENST00000536996 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
SPPL3-204ENST00000536996 TRAPPC3LQ5T215 181 aa18.69■□□□□ 0.58
SPPL3-204ENST00000536996 DUSP27Q5VZP5 1158 aa18.69■□□□□ 0.58
SPPL3-204ENST00000536996 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
SPPL3-204ENST00000536996 CANXP27824 592 aaKnown RBP18.68■□□□□ 0.58
SPPL3-204ENST00000536996 SLFN5Q08AF3 891 aa18.68■□□□□ 0.58
SPPL3-204ENST00000536996 ARHGEF1Q92888 912 aaKnown RBP18.68■□□□□ 0.58
SPPL3-204ENST00000536996 PDGFDQ9GZP0 370 aaPredicted RBP18.68■□□□□ 0.58
SPPL3-204ENST00000536996 A0A087WZG4 1122 aa18.67■□□□□ 0.58
SPPL3-204ENST00000536996 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
SPPL3-204ENST00000536996 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
SPPL3-204ENST00000536996 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
SPPL3-204ENST00000536996 C8orf58Q8NAV2 365 aa18.67■□□□□ 0.58
SPPL3-204ENST00000536996 ARFGEF2Q9Y6D5 1785 aa18.67■□□□□ 0.58
SPPL3-204ENST00000536996 ZBED9Q6R2W3 1325 aa18.67■□□□□ 0.58
SPPL3-204ENST00000536996 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
SPPL3-204ENST00000536996 RFC4P35249 363 aa18.66■□□□□ 0.58
SPPL3-204ENST00000536996 MTFR1LQ9H019 292 aa18.66■□□□□ 0.58
SPPL3-204ENST00000536996 MSH5O43196 834 aa18.65■□□□□ 0.58
SPPL3-204ENST00000536996 EIF2S2P20042 333 aaKnown RBP18.65■□□□□ 0.58
SPPL3-204ENST00000536996 TWISTNBQ3B726 338 aaPredicted RBP18.65■□□□□ 0.58
SPPL3-204ENST00000536996 HDGFL1Q5TGJ6 251 aa18.65■□□□□ 0.58
SPPL3-204ENST00000536996 SMIM5Q71RC9 77 aa18.65■□□□□ 0.58
SPPL3-204ENST00000536996 TRMT2AQ8IZ69 625 aaKnown RBP18.65■□□□□ 0.58
SPPL3-204ENST00000536996 USP42Q9H9J4 1324 aaKnown RBP18.65■□□□□ 0.58
SPPL3-204ENST00000536996 PDIA6Q15084 440 aa18.64■□□□□ 0.57
SPPL3-204ENST00000536996 NPM2Q86SE8 214 aaKnown RBP18.64■□□□□ 0.57
SPPL3-204ENST00000536996 TSPYL6Q8N831 410 aa18.64■□□□□ 0.57
SPPL3-204ENST00000536996 DDX21Q9NR30 783 aaKnown RBP eCLIP18.64■□□□□ 0.57
SPPL3-204ENST00000536996 KIF13BQ9NQT8 1826 aa18.64■□□□□ 0.57
SPPL3-204ENST00000536996 ELL2O00472 640 aaPredicted RBP18.63■□□□□ 0.57
SPPL3-204ENST00000536996 PIP4K2AP48426 406 aaPredicted RBP18.63■□□□□ 0.57
SPPL3-204ENST00000536996 EXOSC9Q06265 439 aaKnown RBP18.63■□□□□ 0.57
SPPL3-204ENST00000536996 CDCA7LQ96GN5 454 aa18.63■□□□□ 0.57
SPPL3-204ENST00000536996 DBF4Q9UBU7 674 aaPredicted RBP18.63■□□□□ 0.57
SPPL3-204ENST00000536996 NARFQ9UHQ1 456 aa18.63■□□□□ 0.57
SPPL3-204ENST00000536996 NRXN2Q9P2S2 1712 aa18.63■□□□□ 0.57
SPPL3-204ENST00000536996 RGL2O15211 777 aa18.62■□□□□ 0.57
SPPL3-204ENST00000536996 CCDC30Q5VVM6 783 aa18.62■□□□□ 0.57
SPPL3-204ENST00000536996 LRP10Q7Z4F1 713 aa18.62■□□□□ 0.57
SPPL3-204ENST00000536996 SPON1Q9HCB6 807 aa18.62■□□□□ 0.57
SPPL3-204ENST00000536996 ZPR1O75312 459 aa18.61■□□□□ 0.57
SPPL3-204ENST00000536996 ZBTB7AO95365 584 aa18.61■□□□□ 0.57
SPPL3-204ENST00000536996 GYS1P13807 737 aa18.61■□□□□ 0.57
SPPL3-204ENST00000536996 CHPF2Q9P2E5 772 aa18.61■□□□□ 0.57
SPPL3-204ENST00000536996 ZNF330Q9Y3S2 320 aaPredicted RBP18.61■□□□□ 0.57
SPPL3-204ENST00000536996 VAMP4O75379 141 aa18.6■□□□□ 0.57
SPPL3-204ENST00000536996 MYL6BP14649 208 aa18.6■□□□□ 0.57
SPPL3-204ENST00000536996 DZIP3Q86Y13 1208 aaKnown RBP18.6■□□□□ 0.57
SPPL3-204ENST00000536996 NLGN1Q8N2Q7 840 aa18.6■□□□□ 0.57
SPPL3-204ENST00000536996 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
SPPL3-204ENST00000536996 HYPKQ9NX55 129 aa18.59■□□□□ 0.57
SPPL3-204ENST00000536996 SRP68Q9UHB9 627 aaKnown RBP18.59■□□□□ 0.57
SPPL3-204ENST00000536996 PROSER3Q2NL68 480 aa18.58■□□□□ 0.56
SPPL3-204ENST00000536996 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.56
SPPL3-204ENST00000536996 SGIP1Q9BQI5 828 aa18.58■□□□□ 0.56
SPPL3-204ENST00000536996 TBC1D2BQ9UPU7 963 aa18.58■□□□□ 0.56
SPPL3-204ENST00000536996 CAMTA2O94983 1202 aa18.57■□□□□ 0.56
SPPL3-204ENST00000536996 CT47B1P0C2W7 299 aaPredicted RBP18.57■□□□□ 0.56
SPPL3-204ENST00000536996 PTGER2P43116 358 aa18.57■□□□□ 0.56
SPPL3-204ENST00000536996 CLEC4GQ6UXB4 293 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms