RNA–Protein interactions for RNA: ENST00000536443.1

OTUB1-207, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 553 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-207ENST00000536443 BABAM1Q9NWV8 329 aa12.94□□□□□ -0.34
OTUB1-207ENST00000536443 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
OTUB1-207ENST00000536443 SNRPA1P09661 255 aaKnown RBP12.93□□□□□ -0.34
OTUB1-207ENST00000536443 NEUROD2Q15784 382 aa12.93□□□□□ -0.34
OTUB1-207ENST00000536443 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
OTUB1-207ENST00000536443 ARHGEF1Q92888 912 aaKnown RBP12.93□□□□□ -0.34
OTUB1-207ENST00000536443 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
OTUB1-207ENST00000536443 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
OTUB1-207ENST00000536443 APAF1O14727 1248 aa12.92□□□□□ -0.34
OTUB1-207ENST00000536443 POLD1P28340 1107 aa12.92□□□□□ -0.34
OTUB1-207ENST00000536443 SOS1Q07889 1333 aaPredicted RBP12.91□□□□□ -0.34
OTUB1-207ENST00000536443 RFC4P35249 363 aa12.91□□□□□ -0.34
OTUB1-207ENST00000536443 ARXQ96QS3 562 aa12.91□□□□□ -0.34
OTUB1-207ENST00000536443 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
OTUB1-207ENST00000536443 ZBTB1Q9Y2K1 713 aa12.91□□□□□ -0.34
OTUB1-207ENST00000536443 KDM3BQ7LBC6 1761 aa12.9□□□□□ -0.34
OTUB1-207ENST00000536443 EIF4A1P60842 406 aaKnown RBP12.9□□□□□ -0.34
OTUB1-207ENST00000536443 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
OTUB1-207ENST00000536443 ZBTB22O15209 634 aa12.89□□□□□ -0.35
OTUB1-207ENST00000536443 EIF5P55010 431 aaKnown RBP12.89□□□□□ -0.35
OTUB1-207ENST00000536443 MSL1Q68DK7 614 aa12.89□□□□□ -0.35
OTUB1-207ENST00000536443 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
OTUB1-207ENST00000536443 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
OTUB1-207ENST00000536443 CHL1O00533 1208 aa12.88□□□□□ -0.35
OTUB1-207ENST00000536443 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
OTUB1-207ENST00000536443 GYS1P13807 737 aa12.88□□□□□ -0.35
OTUB1-207ENST00000536443 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
OTUB1-207ENST00000536443 IL6STP40189 918 aaPredicted RBP12.88□□□□□ -0.35
OTUB1-207ENST00000536443 CALD1Q05682 793 aaKnown RBP12.88□□□□□ -0.35
OTUB1-207ENST00000536443 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
OTUB1-207ENST00000536443 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
OTUB1-207ENST00000536443 COL15A1P39059 1388 aa12.87□□□□□ -0.35
OTUB1-207ENST00000536443 A0A087WZG4 1122 aa12.87□□□□□ -0.35
OTUB1-207ENST00000536443 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
OTUB1-207ENST00000536443 A1BGP04217 495 aa12.87□□□□□ -0.35
OTUB1-207ENST00000536443 CFAP44Q96MT7 982 aa12.87□□□□□ -0.35
OTUB1-207ENST00000536443 C4AP0C0L4 1744 aa12.86□□□□□ -0.35
OTUB1-207ENST00000536443 ZPR1O75312 459 aa12.86□□□□□ -0.35
OTUB1-207ENST00000536443 SYT17Q9BSW7 474 aa12.86□□□□□ -0.35
OTUB1-207ENST00000536443 FHDC1Q9C0D6 1143 aaPredicted RBP12.86□□□□□ -0.35
OTUB1-207ENST00000536443 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
OTUB1-207ENST00000536443 SRP68Q9UHB9 627 aaKnown RBP12.86□□□□□ -0.35
OTUB1-207ENST00000536443 NARFQ9UHQ1 456 aa12.86□□□□□ -0.35
OTUB1-207ENST00000536443 SRCAPQ6ZRS2 3230 aa12.85□□□□□ -0.35
OTUB1-207ENST00000536443 CCER2I3L3R5 266 aa12.85□□□□□ -0.35
OTUB1-207ENST00000536443 ZNF853P0CG23 659 aa12.85□□□□□ -0.35
OTUB1-207ENST00000536443 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
OTUB1-207ENST00000536443 IFT57Q9NWB7 429 aa12.85□□□□□ -0.35
OTUB1-207ENST00000536443 MMP10P09238 476 aa12.84□□□□□ -0.35
OTUB1-207ENST00000536443 USPL1Q5W0Q7 1092 aa12.84□□□□□ -0.35
OTUB1-207ENST00000536443 FAM9BQ8IZU0 186 aa12.84□□□□□ -0.35
OTUB1-207ENST00000536443 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
OTUB1-207ENST00000536443 LAS1LQ9Y4W2 734 aaKnown RBP12.84□□□□□ -0.35
OTUB1-207ENST00000536443 ERBB4Q15303 1308 aa12.84□□□□□ -0.35
OTUB1-207ENST00000536443 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
OTUB1-207ENST00000536443 NBPF26B4DH59 902 aa12.83□□□□□ -0.36
OTUB1-207ENST00000536443 GNAI1P63096 354 aa12.83□□□□□ -0.36
OTUB1-207ENST00000536443 FKBP8Q14318 412 aa12.83□□□□□ -0.36
OTUB1-207ENST00000536443 DIEXFQ68CQ4 756 aaKnown RBP12.83□□□□□ -0.36
OTUB1-207ENST00000536443 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.36
OTUB1-207ENST00000536443 WWC1Q8IX03 1113 aa12.83□□□□□ -0.36
OTUB1-207ENST00000536443 NBPF15Q8N660 670 aa12.83□□□□□ -0.36
OTUB1-207ENST00000536443 CD2APQ9Y5K6 639 aa12.83□□□□□ -0.36
OTUB1-207ENST00000536443 HOXB7P09629 217 aa12.82□□□□□ -0.36
OTUB1-207ENST00000536443 TM4SF1P30408 202 aa12.82□□□□□ -0.36
OTUB1-207ENST00000536443 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
OTUB1-207ENST00000536443 MBIPQ9NS73 344 aa12.82□□□□□ -0.36
OTUB1-207ENST00000536443 PARP3Q9Y6F1 533 aa12.82□□□□□ -0.36
OTUB1-207ENST00000536443 RGL2O15211 777 aa12.81□□□□□ -0.36
OTUB1-207ENST00000536443 CAMTA2O94983 1202 aa12.81□□□□□ -0.36
OTUB1-207ENST00000536443 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
OTUB1-207ENST00000536443 DZIP3Q86Y13 1208 aaKnown RBP12.81□□□□□ -0.36
OTUB1-207ENST00000536443 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
OTUB1-207ENST00000536443 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
OTUB1-207ENST00000536443 IL16Q14005 1332 aa12.81□□□□□ -0.36
OTUB1-207ENST00000536443 CLEC4GQ6UXB4 293 aa12.8□□□□□ -0.36
OTUB1-207ENST00000536443 WDR63Q8IWG1 891 aa12.8□□□□□ -0.36
OTUB1-207ENST00000536443 POLRMTO00411 1230 aaKnown RBP12.79□□□□□ -0.36
OTUB1-207ENST00000536443 EIF2S2P20042 333 aaKnown RBP12.79□□□□□ -0.36
OTUB1-207ENST00000536443 DDR1Q08345 913 aa12.79□□□□□ -0.36
OTUB1-207ENST00000536443 NFIXQ14938 502 aa12.79□□□□□ -0.36
OTUB1-207ENST00000536443 KRT24Q2M2I5 525 aa12.79□□□□□ -0.36
OTUB1-207ENST00000536443 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
OTUB1-207ENST00000536443 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
OTUB1-207ENST00000536443 PDIA6Q15084 440 aa12.78□□□□□ -0.36
OTUB1-207ENST00000536443 DUSP27Q5VZP5 1158 aa12.78□□□□□ -0.36
OTUB1-207ENST00000536443 LRP10Q7Z4F1 713 aa12.78□□□□□ -0.36
OTUB1-207ENST00000536443 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
OTUB1-207ENST00000536443 ZNF652Q9Y2D9 606 aa12.78□□□□□ -0.36
OTUB1-207ENST00000536443 SCN7AQ01118 1682 aa12.77□□□□□ -0.36
OTUB1-207ENST00000536443 ERVV-1B6SEH8 477 aa12.77□□□□□ -0.37
OTUB1-207ENST00000536443 MYL6BP14649 208 aa12.77□□□□□ -0.37
OTUB1-207ENST00000536443 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
OTUB1-207ENST00000536443 TGFB2P61812 414 aa12.77□□□□□ -0.37
OTUB1-207ENST00000536443 TBC1D9BQ66K14 1250 aa12.77□□□□□ -0.37
OTUB1-207ENST00000536443 CHMP4AQ9BY43 222 aa12.77□□□□□ -0.37
OTUB1-207ENST00000536443 DDX21Q9NR30 783 aaKnown RBP eCLIP12.77□□□□□ -0.37
OTUB1-207ENST00000536443 C10orf71Q711Q0 1435 aa12.77□□□□□ -0.37
OTUB1-207ENST00000536443 BCORQ6W2J9 1755 aa12.76□□□□□ -0.37
OTUB1-207ENST00000536443 KIF13BQ9NQT8 1826 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms