RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 RTCBQ9Y3I0 505 aaKnown RBP14.83□□□□□ -0.04
TNFRSF1A-208ENST00000536194 USP16Q9Y5T5 823 aa14.83□□□□□ -0.04
TNFRSF1A-208ENST00000536194 SNRPA1P09661 255 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-208ENST00000536194 ZNF853P0CG23 659 aa14.82□□□□□ -0.04
TNFRSF1A-208ENST00000536194 PTGER2P43116 358 aa14.82□□□□□ -0.04
TNFRSF1A-208ENST00000536194 CCDC27Q2M243 656 aa14.82□□□□□ -0.04
TNFRSF1A-208ENST00000536194 WWC1Q8IX03 1113 aa14.82□□□□□ -0.04
TNFRSF1A-208ENST00000536194 SGIP1Q9BQI5 828 aa14.82□□□□□ -0.04
TNFRSF1A-208ENST00000536194 BABAM1Q9NWV8 329 aa14.82□□□□□ -0.04
TNFRSF1A-208ENST00000536194 SOS1Q07889 1333 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF1A-208ENST00000536194 GIGYF1O75420 1035 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1A-208ENST00000536194 FLAD1Q8NFF5 587 aa14.81□□□□□ -0.04
TNFRSF1A-208ENST00000536194 SLC16A10Q8TF71 515 aa14.81□□□□□ -0.04
TNFRSF1A-208ENST00000536194 SPON1Q9HCB6 807 aa14.81□□□□□ -0.04
TNFRSF1A-208ENST00000536194 LAS1LQ9Y4W2 734 aaKnown RBP14.81□□□□□ -0.04
TNFRSF1A-208ENST00000536194 MSH5O43196 834 aa14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 STARD3NLO95772 234 aa14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 A1BGP04217 495 aa14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 KRT24Q2M2I5 525 aa14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 NCBP3Q53F19 620 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 MSL1Q68DK7 614 aa14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 ARHGEF1Q92888 912 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 CFAP44Q96MT7 982 aa14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 TEX13AQ9BXU3 409 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 SALL2Q9Y467 1007 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1A-208ENST00000536194 ADRA2BP18089 450 aa14.79□□□□□ -0.04
TNFRSF1A-208ENST00000536194 COL15A1P39059 1388 aa14.79□□□□□ -0.04
TNFRSF1A-208ENST00000536194 PIP4K2AP48426 406 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1A-208ENST00000536194 SCN7AQ01118 1682 aa14.79□□□□□ -0.04
TNFRSF1A-208ENST00000536194 TRAPPC3LQ5T215 181 aa14.79□□□□□ -0.04
TNFRSF1A-208ENST00000536194 BCORQ6W2J9 1755 aa14.79□□□□□ -0.04
TNFRSF1A-208ENST00000536194 MBIPQ9NS73 344 aa14.79□□□□□ -0.04
TNFRSF1A-208ENST00000536194 IFT57Q9NWB7 429 aa14.79□□□□□ -0.04
TNFRSF1A-208ENST00000536194 CANXP27824 592 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1A-208ENST00000536194 USP42Q9H9J4 1324 aaKnown RBP14.77□□□□□ -0.04
TNFRSF1A-208ENST00000536194 NBPF26B4DH59 902 aa14.77□□□□□ -0.05
TNFRSF1A-208ENST00000536194 EIF5P55010 431 aaKnown RBP14.77□□□□□ -0.05
TNFRSF1A-208ENST00000536194 CALD1Q05682 793 aaKnown RBP14.77□□□□□ -0.05
TNFRSF1A-208ENST00000536194 NBPF10Q6P3W6 841 aaKnown RBP14.77□□□□□ -0.05
TNFRSF1A-208ENST00000536194 NBPF15Q8N660 670 aa14.77□□□□□ -0.05
TNFRSF1A-208ENST00000536194 SRP68Q9UHB9 627 aaKnown RBP14.77□□□□□ -0.05
TNFRSF1A-208ENST00000536194 ZNF521Q96K83 1311 aa14.76□□□□□ -0.05
TNFRSF1A-208ENST00000536194 GYS1P13807 737 aa14.76□□□□□ -0.05
TNFRSF1A-208ENST00000536194 RFC4P35249 363 aa14.76□□□□□ -0.05
TNFRSF1A-208ENST00000536194 GNAI1P63096 354 aa14.76□□□□□ -0.05
TNFRSF1A-208ENST00000536194 SRCAPQ6ZRS2 3230 aa14.75□□□□□ -0.05
TNFRSF1A-208ENST00000536194 IL6STP40189 918 aaPredicted RBP14.75□□□□□ -0.05
TNFRSF1A-208ENST00000536194 IL16Q14005 1332 aa14.74□□□□□ -0.05
TNFRSF1A-208ENST00000536194 TSR2Q969E8 191 aaKnown RBP14.74□□□□□ -0.05
TNFRSF1A-208ENST00000536194 SPINK5Q9NQ38 1064 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF1A-208ENST00000536194 USPL1Q5W0Q7 1092 aa14.73□□□□□ -0.05
TNFRSF1A-208ENST00000536194 WDR63Q8IWG1 891 aa14.73□□□□□ -0.05
TNFRSF1A-208ENST00000536194 NGEFQ8N5V2 710 aa14.73□□□□□ -0.05
TNFRSF1A-208ENST00000536194 BCL2L12Q9HB09 334 aa14.73□□□□□ -0.05
TNFRSF1A-208ENST00000536194 ZNF330Q9Y3S2 320 aaPredicted RBP14.73□□□□□ -0.05
TNFRSF1A-208ENST00000536194 AFDNP55196 1824 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 EIF2S2P20042 333 aaKnown RBP14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 FKBP8Q14318 412 aa14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 PDIA6Q15084 440 aa14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 PROSER3Q2NL68 480 aa14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 DUSP27Q5VZP5 1158 aa14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 LRP10Q7Z4F1 713 aa14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 C8orf58Q8NAV2 365 aa14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 NECTIN2Q92692 538 aa14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 NARFQ9UHQ1 456 aa14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 TBC1D2BQ9UPU7 963 aa14.72□□□□□ -0.05
TNFRSF1A-208ENST00000536194 NUP98P52948 1817 aa14.71□□□□□ -0.05
TNFRSF1A-208ENST00000536194 FANCIQ9NVI1 1328 aa14.71□□□□□ -0.05
TNFRSF1A-208ENST00000536194 ZPR1O75312 459 aa14.71□□□□□ -0.05
TNFRSF1A-208ENST00000536194 CAMTA2O94983 1202 aa14.71□□□□□ -0.05
TNFRSF1A-208ENST00000536194 POLD1P28340 1107 aa14.71□□□□□ -0.05
TNFRSF1A-208ENST00000536194 TSPYL6Q8N831 410 aa14.71□□□□□ -0.05
TNFRSF1A-208ENST00000536194 ARXQ96QS3 562 aa14.71□□□□□ -0.05
TNFRSF1A-208ENST00000536194 KIF13BQ9NQT8 1826 aa14.71□□□□□ -0.06
TNFRSF1A-208ENST00000536194 NRXN2Q9P2S2 1712 aa14.7□□□□□ -0.06
TNFRSF1A-208ENST00000536194 A0A087WZG4 1122 aa14.7□□□□□ -0.06
TNFRSF1A-208ENST00000536194 ELL2O00472 640 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-208ENST00000536194 ANXA1P04083 346 aa14.7□□□□□ -0.06
TNFRSF1A-208ENST00000536194 MMP10P09238 476 aa14.7□□□□□ -0.06
TNFRSF1A-208ENST00000536194 HOXB7P09629 217 aa14.7□□□□□ -0.06
TNFRSF1A-208ENST00000536194 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-208ENST00000536194 NLGN1Q8N2Q7 840 aa14.7□□□□□ -0.06
TNFRSF1A-208ENST00000536194 PPP1R1BQ9UD71 204 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-208ENST00000536194 KIAA1551Q9HCM1 1747 aa14.69□□□□□ -0.06
TNFRSF1A-208ENST00000536194 ERBB4Q15303 1308 aa14.69□□□□□ -0.06
TNFRSF1A-208ENST00000536194 MYL6BP14649 208 aa14.69□□□□□ -0.06
TNFRSF1A-208ENST00000536194 DDR1Q08345 913 aa14.69□□□□□ -0.06
TNFRSF1A-208ENST00000536194 FHDC1Q9C0D6 1143 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-208ENST00000536194 TM4SF1P30408 202 aa14.68□□□□□ -0.06
TNFRSF1A-208ENST00000536194 HDGFL1Q5TGJ6 251 aa14.68□□□□□ -0.06
TNFRSF1A-208ENST00000536194 CHPF2Q9P2E5 772 aa14.68□□□□□ -0.06
TNFRSF1A-208ENST00000536194 NFIXQ14938 502 aa14.67□□□□□ -0.06
TNFRSF1A-208ENST00000536194 TTLL7Q6ZT98 887 aa14.67□□□□□ -0.06
TNFRSF1A-208ENST00000536194 ANKRD36CQ5JPF3 1778 aa14.67□□□□□ -0.06
TNFRSF1A-208ENST00000536194 POLRMTO00411 1230 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1A-208ENST00000536194 TBC1D9BQ66K14 1250 aa14.66□□□□□ -0.06
TNFRSF1A-208ENST00000536194 SYT17Q9BSW7 474 aa14.66□□□□□ -0.06
TNFRSF1A-208ENST00000536194 DDX21Q9NR30 783 aaKnown RBP eCLIP14.66□□□□□ -0.06
TNFRSF1A-208ENST00000536194 N4BP2Q86UW6 1770 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-208ENST00000536194 ARFGEF2Q9Y6D5 1785 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms