RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 DNAJC10Q8IXB1 793 aa17.26■□□□□ 0.35
CHFR-210ENST00000535527 RTF1Q92541 710 aaKnown RBP17.26■□□□□ 0.35
CHFR-210ENST00000535527 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
CHFR-210ENST00000535527 CD2APQ9Y5K6 639 aa17.26■□□□□ 0.35
CHFR-210ENST00000535527 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
CHFR-210ENST00000535527 BCORQ6W2J9 1755 aa17.25■□□□□ 0.35
CHFR-210ENST00000535527 NEFMP07197 916 aa17.25■□□□□ 0.35
CHFR-210ENST00000535527 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
CHFR-210ENST00000535527 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
CHFR-210ENST00000535527 MSH5O43196 834 aa17.24■□□□□ 0.35
CHFR-210ENST00000535527 ATP6V1AP38606 617 aa17.24■□□□□ 0.35
CHFR-210ENST00000535527 KRT24Q2M2I5 525 aa17.24■□□□□ 0.35
CHFR-210ENST00000535527 COL23A1Q86Y22 540 aaPredicted RBP17.24■□□□□ 0.35
CHFR-210ENST00000535527 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
CHFR-210ENST00000535527 ADCY9O60503 1353 aa17.23■□□□□ 0.35
CHFR-210ENST00000535527 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
CHFR-210ENST00000535527 ZNF853P0CG23 659 aa17.22■□□□□ 0.35
CHFR-210ENST00000535527 FLAD1Q8NFF5 587 aa17.22■□□□□ 0.35
CHFR-210ENST00000535527 SPINK5Q9NQ38 1064 aaPredicted RBP17.22■□□□□ 0.35
CHFR-210ENST00000535527 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
CHFR-210ENST00000535527 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
CHFR-210ENST00000535527 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
CHFR-210ENST00000535527 INTS5Q6P9B9 1019 aaKnown RBP17.2■□□□□ 0.34
CHFR-210ENST00000535527 CNTNAP4Q9C0A0 1308 aa17.2■□□□□ 0.34
CHFR-210ENST00000535527 CHL1O00533 1208 aa17.19■□□□□ 0.34
CHFR-210ENST00000535527 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
CHFR-210ENST00000535527 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
CHFR-210ENST00000535527 CCDC27Q2M243 656 aa17.19■□□□□ 0.34
CHFR-210ENST00000535527 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
CHFR-210ENST00000535527 PIP4K2AP48426 406 aaPredicted RBP17.18■□□□□ 0.34
CHFR-210ENST00000535527 MBIPQ9NS73 344 aa17.18■□□□□ 0.34
CHFR-210ENST00000535527 ZBTB1Q9Y2K1 713 aa17.18■□□□□ 0.34
CHFR-210ENST00000535527 USP16Q9Y5T5 823 aa17.18■□□□□ 0.34
CHFR-210ENST00000535527 TTC5Q8N0Z6 440 aa17.17■□□□□ 0.34
CHFR-210ENST00000535527 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
CHFR-210ENST00000535527 APLP1P51693 650 aa17.16■□□□□ 0.34
CHFR-210ENST00000535527 MSL1Q68DK7 614 aa17.16■□□□□ 0.34
CHFR-210ENST00000535527 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
CHFR-210ENST00000535527 ZNF526Q8TF50 670 aaPredicted RBP17.16■□□□□ 0.34
CHFR-210ENST00000535527 TSR2Q969E8 191 aaKnown RBP17.16■□□□□ 0.34
CHFR-210ENST00000535527 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
CHFR-210ENST00000535527 GNPATO15228 680 aa17.15■□□□□ 0.34
CHFR-210ENST00000535527 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
CHFR-210ENST00000535527 LAS1LQ9Y4W2 734 aaKnown RBP17.15■□□□□ 0.34
CHFR-210ENST00000535527 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
CHFR-210ENST00000535527 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.34
CHFR-210ENST00000535527 NBPF26B4DH59 902 aa17.14■□□□□ 0.33
CHFR-210ENST00000535527 KIF3CO14782 793 aa17.14■□□□□ 0.33
CHFR-210ENST00000535527 PHF14O94880 888 aa17.14■□□□□ 0.33
CHFR-210ENST00000535527 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
CHFR-210ENST00000535527 NBPF10Q6P3W6 841 aaKnown RBP17.14■□□□□ 0.33
CHFR-210ENST00000535527 NBPF15Q8N660 670 aa17.14■□□□□ 0.33
CHFR-210ENST00000535527 IFT57Q9NWB7 429 aa17.14■□□□□ 0.33
CHFR-210ENST00000535527 NUP98P52948 1817 aa17.14■□□□□ 0.33
CHFR-210ENST00000535527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
CHFR-210ENST00000535527 A1BGP04217 495 aa17.13■□□□□ 0.33
CHFR-210ENST00000535527 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
CHFR-210ENST00000535527 AK7Q96M32 723 aa17.13■□□□□ 0.33
CHFR-210ENST00000535527 CCDC87Q9NVE4 849 aa17.13■□□□□ 0.33
CHFR-210ENST00000535527 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
CHFR-210ENST00000535527 ANKRD36CQ5JPF3 1778 aa17.12■□□□□ 0.33
CHFR-210ENST00000535527 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
CHFR-210ENST00000535527 COL15A1P39059 1388 aa17.12■□□□□ 0.33
CHFR-210ENST00000535527 ARFGEF2Q9Y6D5 1785 aa17.11■□□□□ 0.33
CHFR-210ENST00000535527 RPS6KA4O75676 772 aa17.11■□□□□ 0.33
CHFR-210ENST00000535527 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
CHFR-210ENST00000535527 TSPYL6Q8N831 410 aa17.11■□□□□ 0.33
CHFR-210ENST00000535527 C8orf58Q8NAV2 365 aa17.11■□□□□ 0.33
CHFR-210ENST00000535527 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
CHFR-210ENST00000535527 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
CHFR-210ENST00000535527 SNRPA1P09661 255 aaKnown RBP17.1■□□□□ 0.33
CHFR-210ENST00000535527 PROSER3Q2NL68 480 aa17.1■□□□□ 0.33
CHFR-210ENST00000535527 DNAJC5GQ8N7S2 189 aa17.1■□□□□ 0.33
CHFR-210ENST00000535527 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
CHFR-210ENST00000535527 IL16Q14005 1332 aa17.1■□□□□ 0.33
CHFR-210ENST00000535527 ANXA1P04083 346 aa17.09■□□□□ 0.33
CHFR-210ENST00000535527 CANXP27824 592 aaKnown RBP17.09■□□□□ 0.33
CHFR-210ENST00000535527 SSFA2P28290 1259 aa17.09■□□□□ 0.33
CHFR-210ENST00000535527 PDIA6Q15084 440 aa17.09■□□□□ 0.33
CHFR-210ENST00000535527 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
CHFR-210ENST00000535527 CDCA7LQ96GN5 454 aa17.09■□□□□ 0.33
CHFR-210ENST00000535527 KIF13BQ9NQT8 1826 aa17.09■□□□□ 0.33
CHFR-210ENST00000535527 TOMM70O94826 608 aa17.08■□□□□ 0.32
CHFR-210ENST00000535527 EIF5P55010 431 aaKnown RBP17.08■□□□□ 0.32
CHFR-210ENST00000535527 GNAI1P63096 354 aa17.08■□□□□ 0.32
CHFR-210ENST00000535527 BCL2L12Q9HB09 334 aa17.08■□□□□ 0.32
CHFR-210ENST00000535527 ANKRD31Q8N7Z5 1873 aa17.07■□□□□ 0.32
CHFR-210ENST00000535527 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
CHFR-210ENST00000535527 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
CHFR-210ENST00000535527 NECTIN2Q92692 538 aa17.07■□□□□ 0.32
CHFR-210ENST00000535527 RTCBQ9Y3I0 505 aaKnown RBP17.07■□□□□ 0.32
CHFR-210ENST00000535527 ELL2O00472 640 aaPredicted RBP17.06■□□□□ 0.32
CHFR-210ENST00000535527 DUSP27Q5VZP5 1158 aa17.06■□□□□ 0.32
CHFR-210ENST00000535527 CACNA1FO60840 1977 aa17.06■□□□□ 0.32
CHFR-210ENST00000535527 STARD3NLO95772 234 aa17.04■□□□□ 0.32
CHFR-210ENST00000535527 GYS1P13807 737 aa17.04■□□□□ 0.32
CHFR-210ENST00000535527 EIF2S2P20042 333 aaKnown RBP17.03■□□□□ 0.32
CHFR-210ENST00000535527 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
CHFR-210ENST00000535527 CALD1Q05682 793 aaKnown RBP17.03■□□□□ 0.32
CHFR-210ENST00000535527 EXOSC9Q06265 439 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms