RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-231ENST00000534382 MIS18AQ9NYP9 233 aa19.11■□□□□ 0.65
CTSB-231ENST00000534382 RRP7AQ9Y3A4 280 aaKnown RBP19.11■□□□□ 0.65
CTSB-231ENST00000534382 NEUROD2Q15784 382 aa19.1■□□□□ 0.65
CTSB-231ENST00000534382 SYT17Q9BSW7 474 aa19.09■□□□□ 0.65
CTSB-231ENST00000534382 ZBTB1Q9Y2K1 713 aa19.09■□□□□ 0.65
CTSB-231ENST00000534382 SOS1Q07889 1333 aaPredicted RBP19.08■□□□□ 0.65
CTSB-231ENST00000534382 SNRPA1P09661 255 aaKnown RBP19.08■□□□□ 0.64
CTSB-231ENST00000534382 MRS2Q9HD23 443 aa19.08■□□□□ 0.64
CTSB-231ENST00000534382 GYS1P13807 737 aa19.07■□□□□ 0.64
CTSB-231ENST00000534382 CANXP27824 592 aaKnown RBP19.07■□□□□ 0.64
CTSB-231ENST00000534382 NLGN1Q8N2Q7 840 aa19.07■□□□□ 0.64
CTSB-231ENST00000534382 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
CTSB-231ENST00000534382 TRIM35Q9UPQ4 493 aa19.06■□□□□ 0.64
CTSB-231ENST00000534382 USP42Q9H9J4 1324 aaKnown RBP19.05■□□□□ 0.64
CTSB-231ENST00000534382 PRAMEF22A3QJZ6 481 aa19.05■□□□□ 0.64
CTSB-231ENST00000534382 APAF1O14727 1248 aa19.05■□□□□ 0.64
CTSB-231ENST00000534382 A1BGP04217 495 aa19.05■□□□□ 0.64
CTSB-231ENST00000534382 BABAM1Q9NWV8 329 aa19.05■□□□□ 0.64
CTSB-231ENST00000534382 SRP68Q9UHB9 627 aaKnown RBP19.05■□□□□ 0.64
CTSB-231ENST00000534382 ZPR1O75312 459 aa19.04■□□□□ 0.64
CTSB-231ENST00000534382 EIF5P55010 431 aaKnown RBP19.04■□□□□ 0.64
CTSB-231ENST00000534382 EIF4A1P60842 406 aaKnown RBP19.04■□□□□ 0.64
CTSB-231ENST00000534382 KLHL34Q8N239 644 aa19.04■□□□□ 0.64
CTSB-231ENST00000534382 TSPYL4Q9UJ04 414 aa19.04■□□□□ 0.64
CTSB-231ENST00000534382 COL15A1P39059 1388 aa19.04■□□□□ 0.64
CTSB-231ENST00000534382 MMP10P09238 476 aa19.03■□□□□ 0.64
CTSB-231ENST00000534382 A0A087WZG4 1122 aa19.02■□□□□ 0.64
CTSB-231ENST00000534382 IL6STP40189 918 aaPredicted RBP19.02■□□□□ 0.64
CTSB-231ENST00000534382 USPL1Q5W0Q7 1092 aa19.02■□□□□ 0.64
CTSB-231ENST00000534382 NARFQ9UHQ1 456 aa19.02■□□□□ 0.64
CTSB-231ENST00000534382 C4AP0C0L4 1744 aa19.01■□□□□ 0.63
CTSB-231ENST00000534382 GIGYF1O75420 1035 aaPredicted RBP19.01■□□□□ 0.63
CTSB-231ENST00000534382 FKBP8Q14318 412 aa19.01■□□□□ 0.63
CTSB-231ENST00000534382 CD2APQ9Y5K6 639 aa19.01■□□□□ 0.63
CTSB-231ENST00000534382 DCAF8L1A6NGE4 600 aa19■□□□□ 0.63
CTSB-231ENST00000534382 CHL1O00533 1208 aa19■□□□□ 0.63
CTSB-231ENST00000534382 NPM2Q86SE8 214 aaKnown RBP19■□□□□ 0.63
CTSB-231ENST00000534382 ZNF330Q9Y3S2 320 aaPredicted RBP19■□□□□ 0.63
CTSB-231ENST00000534382 KDM3BQ7LBC6 1761 aa19■□□□□ 0.63
CTSB-231ENST00000534382 PIP4K2AP48426 406 aaPredicted RBP18.98■□□□□ 0.63
CTSB-231ENST00000534382 NLGN2Q8NFZ4 835 aa18.98■□□□□ 0.63
CTSB-231ENST00000534382 LAS1LQ9Y4W2 734 aaKnown RBP18.98■□□□□ 0.63
CTSB-231ENST00000534382 PARP3Q9Y6F1 533 aa18.98■□□□□ 0.63
CTSB-231ENST00000534382 TM4SF1P30408 202 aa18.97■□□□□ 0.63
CTSB-231ENST00000534382 BCL2L12Q9HB09 334 aa18.97■□□□□ 0.63
CTSB-231ENST00000534382 TBC1D2BQ9UPU7 963 aa18.97■□□□□ 0.63
CTSB-231ENST00000534382 NBPF26B4DH59 902 aa18.96■□□□□ 0.63
CTSB-231ENST00000534382 CALD1Q05682 793 aaKnown RBP18.96■□□□□ 0.63
CTSB-231ENST00000534382 NBPF10Q6P3W6 841 aaKnown RBP18.96■□□□□ 0.63
CTSB-231ENST00000534382 NBPF15Q8N660 670 aa18.96■□□□□ 0.63
CTSB-231ENST00000534382 CFAP44Q96MT7 982 aa18.96■□□□□ 0.63
CTSB-231ENST00000534382 DZIP3Q86Y13 1208 aaKnown RBP18.95■□□□□ 0.62
CTSB-231ENST00000534382 DDR1Q08345 913 aa18.94■□□□□ 0.62
CTSB-231ENST00000534382 NFIXQ14938 502 aa18.94■□□□□ 0.62
CTSB-231ENST00000534382 POLRMTO00411 1230 aaKnown RBP18.93■□□□□ 0.62
CTSB-231ENST00000534382 CAMTA2O94983 1202 aa18.93■□□□□ 0.62
CTSB-231ENST00000534382 ZNF853P0CG23 659 aa18.93■□□□□ 0.62
CTSB-231ENST00000534382 FAM9BQ8IZU0 186 aa18.93■□□□□ 0.62
CTSB-231ENST00000534382 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
CTSB-231ENST00000534382 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
CTSB-231ENST00000534382 IFT57Q9NWB7 429 aa18.92■□□□□ 0.62
CTSB-231ENST00000534382 SENP3-EIF4A1A0A087X0R7 540 aa18.91■□□□□ 0.62
CTSB-231ENST00000534382 EIF2S2P20042 333 aaKnown RBP18.91■□□□□ 0.62
CTSB-231ENST00000534382 GNAI1P63096 354 aa18.91■□□□□ 0.62
CTSB-231ENST00000534382 GPR162Q16538 588 aa18.91■□□□□ 0.62
CTSB-231ENST00000534382 MBIPQ9NS73 344 aa18.91■□□□□ 0.62
CTSB-231ENST00000534382 ERBB4Q15303 1308 aa18.91■□□□□ 0.62
CTSB-231ENST00000534382 LAMB4A4D0S4 1761 aa18.91■□□□□ 0.62
CTSB-231ENST00000534382 TGFB2P61812 414 aa18.9■□□□□ 0.62
CTSB-231ENST00000534382 KRT24Q2M2I5 525 aa18.9■□□□□ 0.62
CTSB-231ENST00000534382 TBC1D9BQ66K14 1250 aa18.9■□□□□ 0.62
CTSB-231ENST00000534382 BICDL1Q6ZP65 573 aa18.9■□□□□ 0.62
CTSB-231ENST00000534382 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
CTSB-231ENST00000534382 C10orf71Q711Q0 1435 aa18.9■□□□□ 0.62
CTSB-231ENST00000534382 SERPINB2P05120 415 aa18.89■□□□□ 0.61
CTSB-231ENST00000534382 MYL6BP14649 208 aa18.89■□□□□ 0.61
CTSB-231ENST00000534382 CLEC4GQ6UXB4 293 aa18.89■□□□□ 0.61
CTSB-231ENST00000534382 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
CTSB-231ENST00000534382 NGEFQ8N5V2 710 aa18.89■□□□□ 0.61
CTSB-231ENST00000534382 RGL2O15211 777 aa18.88■□□□□ 0.61
CTSB-231ENST00000534382 HOXB7P09629 217 aa18.88■□□□□ 0.61
CTSB-231ENST00000534382 ZNF652Q9Y2D9 606 aa18.88■□□□□ 0.61
CTSB-231ENST00000534382 PDIA6Q15084 440 aa18.87■□□□□ 0.61
CTSB-231ENST00000534382 SETDB2Q96T68 719 aa18.87■□□□□ 0.61
CTSB-231ENST00000534382 SCN7AQ01118 1682 aa18.86■□□□□ 0.61
CTSB-231ENST00000534382 DUSP27Q5VZP5 1158 aa18.86■□□□□ 0.61
CTSB-231ENST00000534382 NECTIN2Q92692 538 aa18.86■□□□□ 0.61
CTSB-231ENST00000534382 KIF13BQ9NQT8 1826 aa18.86■□□□□ 0.61
CTSB-231ENST00000534382 A0A0G2JLW4 131 aa18.85■□□□□ 0.61
CTSB-231ENST00000534382 ERVV-1B6SEH8 477 aa18.85■□□□□ 0.61
CTSB-231ENST00000534382 CCER2I3L3R5 266 aa18.85■□□□□ 0.61
CTSB-231ENST00000534382 YBX3P16989 372 aaKnown RBP eCLIP18.85■□□□□ 0.61
CTSB-231ENST00000534382 LRP10Q7Z4F1 713 aa18.85■□□□□ 0.61
CTSB-231ENST00000534382 SALL2Q9Y467 1007 aaPredicted RBP18.85■□□□□ 0.61
CTSB-231ENST00000534382 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
CTSB-231ENST00000534382 CARMIL3Q8ND23 1372 aa18.84■□□□□ 0.61
CTSB-231ENST00000534382 IL16Q14005 1332 aa18.84■□□□□ 0.61
CTSB-231ENST00000534382 MAP3K15Q6ZN16 1313 aa18.84■□□□□ 0.61
CTSB-231ENST00000534382 DPEP1P16444 411 aa18.84■□□□□ 0.61
CTSB-231ENST00000534382 HLFQ16534 295 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms