RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 NBPF10Q6P3W6 841 aaKnown RBP11.94□□□□□ -0.5
CASP4-213ENST00000534356 KIFC2Q96AC6 838 aa11.94□□□□□ -0.5
CASP4-213ENST00000534356 PARP3Q9Y6F1 533 aa11.94□□□□□ -0.5
CASP4-213ENST00000534356 POTECB2RU33 542 aa11.93□□□□□ -0.5
CASP4-213ENST00000534356 SNRPBP14678 240 aaKnown RBP11.93□□□□□ -0.5
CASP4-213ENST00000534356 FKBP5Q13451 457 aaPredicted RBP11.93□□□□□ -0.5
CASP4-213ENST00000534356 TEAD4Q15561 434 aa11.93□□□□□ -0.5
CASP4-213ENST00000534356 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.93□□□□□ -0.5
CASP4-213ENST00000534356 TAS1R3Q7RTX0 852 aa11.93□□□□□ -0.5
CASP4-213ENST00000534356 NOS2P35228 1153 aa11.92□□□□□ -0.5
CASP4-213ENST00000534356 SH3PXD2AQ5TCZ1 1133 aa11.92□□□□□ -0.5
CASP4-213ENST00000534356 C2orf49Q9BVC5 232 aaPredicted RBP11.92□□□□□ -0.5
CASP4-213ENST00000534356 SERTM1A2A2V5 107 aa11.91□□□□□ -0.5
CASP4-213ENST00000534356 SCNN1AP37088 669 aa11.91□□□□□ -0.5
CASP4-213ENST00000534356 PLA2G4AP47712 749 aa11.91□□□□□ -0.5
CASP4-213ENST00000534356 L3MBTL2Q969R5 705 aa11.91□□□□□ -0.5
CASP4-213ENST00000534356 EML1O00423 815 aa11.9□□□□□ -0.5
CASP4-213ENST00000534356 FOXO3O43524 673 aa11.9□□□□□ -0.5
CASP4-213ENST00000534356 STAG2Q8N3U4 1231 aa11.9□□□□□ -0.5
CASP4-213ENST00000534356 ZNF232Q9UNY5 417 aa11.9□□□□□ -0.5
CASP4-213ENST00000534356 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
CASP4-213ENST00000534356 BRD1O95696 1058 aa11.89□□□□□ -0.51
CASP4-213ENST00000534356 WDR44Q5JSH3 913 aa11.89□□□□□ -0.51
CASP4-213ENST00000534356 POTEAQ6S8J7 498 aa11.89□□□□□ -0.51
CASP4-213ENST00000534356 MKNK1Q9BUB5 465 aa11.89□□□□□ -0.51
CASP4-213ENST00000534356 B4GALNT3Q6L9W6 998 aa11.88□□□□□ -0.51
CASP4-213ENST00000534356 CAPN12Q6ZSI9 719 aa11.88□□□□□ -0.51
CASP4-213ENST00000534356 C1orf216Q8TAB5 229 aa11.88□□□□□ -0.51
CASP4-213ENST00000534356 CHMP3Q9Y3E7 222 aa11.88□□□□□ -0.51
CASP4-213ENST00000534356 AIDAQ96BJ3 306 aa11.87□□□□□ -0.51
CASP4-213ENST00000534356 TIMMDC1Q9NPL8 285 aa11.87□□□□□ -0.51
CASP4-213ENST00000534356 HCN4Q9Y3Q4 1203 aa11.87□□□□□ -0.51
CASP4-213ENST00000534356 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
CASP4-213ENST00000534356 TXLNAP40222 546 aa11.86□□□□□ -0.51
CASP4-213ENST00000534356 HIRAP54198 1017 aaPredicted RBP11.86□□□□□ -0.51
CASP4-213ENST00000534356 PTSQ03393 145 aa11.86□□□□□ -0.51
CASP4-213ENST00000534356 VTI1AQ96AJ9 217 aa11.85□□□□□ -0.51
CASP4-213ENST00000534356 NGLY1Q96IV0 654 aa11.84□□□□□ -0.51
CASP4-213ENST00000534356 AEBP1Q8IUX7 1158 aa11.83□□□□□ -0.52
CASP4-213ENST00000534356 COL26A1Q96A83 441 aa11.83□□□□□ -0.52
CASP4-213ENST00000534356 SEPT3Q9UH03 358 aa11.83□□□□□ -0.52
CASP4-213ENST00000534356 A0A1B0GTH6 734 aa11.82□□□□□ -0.52
CASP4-213ENST00000534356 SLC35F4A4IF30 521 aa11.82□□□□□ -0.52
CASP4-213ENST00000534356 PTCD1O75127 700 aaKnown RBP11.82□□□□□ -0.52
CASP4-213ENST00000534356 MSX1P28360 303 aa11.82□□□□□ -0.52
CASP4-213ENST00000534356 NAA30Q147X3 362 aaPredicted RBP11.82□□□□□ -0.52
CASP4-213ENST00000534356 NBPF1Q3BBV0 1214 aa11.82□□□□□ -0.52
CASP4-213ENST00000534356 ALDH16A1Q8IZ83 802 aa11.82□□□□□ -0.52
CASP4-213ENST00000534356 PHACTR1Q9C0D0 580 aa11.82□□□□□ -0.52
CASP4-213ENST00000534356 ZDHHC3Q9NYG2 299 aa11.82□□□□□ -0.52
CASP4-213ENST00000534356 DYRK1BQ9Y463 629 aa11.82□□□□□ -0.52
CASP4-213ENST00000534356 QTRT2Q9H974 415 aaKnown RBP11.81□□□□□ -0.52
CASP4-213ENST00000534356 ATP4AP20648 1035 aa11.8□□□□□ -0.52
CASP4-213ENST00000534356 ARID4AP29374 1257 aaPredicted RBP11.8□□□□□ -0.52
CASP4-213ENST00000534356 TXNDC2Q86VQ3 553 aa11.8□□□□□ -0.52
CASP4-213ENST00000534356 GAS2L1Q99501 681 aaPredicted RBP11.8□□□□□ -0.52
CASP4-213ENST00000534356 GPAMQ9HCL2 828 aa11.8□□□□□ -0.52
CASP4-213ENST00000534356 KCNA1Q09470 495 aa11.79□□□□□ -0.52
CASP4-213ENST00000534356 C1orf53Q5VUE5 145 aa11.79□□□□□ -0.52
CASP4-213ENST00000534356 KCTD17Q8N5Z5 321 aa11.79□□□□□ -0.52
CASP4-213ENST00000534356 CCDC155Q8N6L0 562 aa11.79□□□□□ -0.52
CASP4-213ENST00000534356 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
CASP4-213ENST00000534356 SAP130Q9H0E3 1048 aa11.79□□□□□ -0.52
CASP4-213ENST00000534356 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.79□□□□□ -0.52
CASP4-213ENST00000534356 F11P03951 625 aa11.78□□□□□ -0.52
CASP4-213ENST00000534356 TATP17735 454 aaPredicted RBP11.78□□□□□ -0.52
CASP4-213ENST00000534356 KLRG1Q96E93 195 aa11.78□□□□□ -0.52
CASP4-213ENST00000534356 COX20Q5RI15 118 aa11.77□□□□□ -0.53
CASP4-213ENST00000534356 ZNF787Q6DD87 383 aa11.77□□□□□ -0.53
CASP4-213ENST00000534356 LRFN2Q9ULH4 789 aa11.77□□□□□ -0.53
CASP4-213ENST00000534356 SERPINB4P48594 390 aa11.76□□□□□ -0.53
CASP4-213ENST00000534356 RTN1Q16799 776 aa11.76□□□□□ -0.53
CASP4-213ENST00000534356 C16orf46Q6P387 395 aa11.76□□□□□ -0.53
CASP4-213ENST00000534356 RHPN1Q8TCX5 695 aa11.76□□□□□ -0.53
CASP4-213ENST00000534356 GTF3C2Q8WUA4 911 aaPredicted RBP11.76□□□□□ -0.53
CASP4-213ENST00000534356 MYO19Q96H55 970 aa11.76□□□□□ -0.53
CASP4-213ENST00000534356 RUBCNLQ9H714 662 aa11.76□□□□□ -0.53
CASP4-213ENST00000534356 ARSJQ5FYB0 599 aaPredicted RBP11.75□□□□□ -0.53
CASP4-213ENST00000534356 BICDL1Q6ZP65 573 aa11.75□□□□□ -0.53
CASP4-213ENST00000534356 RIPOR1Q6ZS17 1223 aa11.75□□□□□ -0.53
CASP4-213ENST00000534356 CCER1Q8TC90 406 aaPredicted RBP11.75□□□□□ -0.53
CASP4-213ENST00000534356 ZIC5Q96T25 663 aa11.75□□□□□ -0.53
CASP4-213ENST00000534356 CUEDC1Q9NWM3 386 aaPredicted RBP11.75□□□□□ -0.53
CASP4-213ENST00000534356 MTMR7Q9Y216 660 aa11.75□□□□□ -0.53
CASP4-213ENST00000534356 GNEQ9Y223 722 aaKnown RBP11.75□□□□□ -0.53
CASP4-213ENST00000534356 KLK14Q9P0G3 267 aa11.74□□□□□ -0.53
CASP4-213ENST00000534356 DNMT3AQ9Y6K1 912 aaPredicted RBP11.74□□□□□ -0.53
CASP4-213ENST00000534356 IVNS1ABPQ9Y6Y0 642 aa11.74□□□□□ -0.53
CASP4-213ENST00000534356 PPFIA3O75145 1194 aa11.73□□□□□ -0.53
CASP4-213ENST00000534356 ABL1P00519 1130 aa11.73□□□□□ -0.53
CASP4-213ENST00000534356 CRISPLD1Q9H336 500 aa11.73□□□□□ -0.53
CASP4-213ENST00000534356 A0A1W2PNR3 127 aa11.72□□□□□ -0.53
CASP4-213ENST00000534356 DGKZQ13574 1117 aa11.72□□□□□ -0.53
CASP4-213ENST00000534356 PGBD3Q8N328 593 aa11.72□□□□□ -0.53
CASP4-213ENST00000534356 ANO2Q9NQ90 1003 aa11.72□□□□□ -0.53
CASP4-213ENST00000534356 TNFRSF10BO14763 440 aa11.71□□□□□ -0.53
CASP4-213ENST00000534356 THBS1P07996 1170 aa11.71□□□□□ -0.53
CASP4-213ENST00000534356 ITGA6P23229 1130 aa11.71□□□□□ -0.53
CASP4-213ENST00000534356 ZNF211Q13398 564 aaPredicted RBP11.71□□□□□ -0.53
CASP4-213ENST00000534356 MTMR3Q13615 1198 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms