RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 SALL2Q9Y467 1007 aaPredicted RBP25.81■■□□□ 1.72
CHEK1-215ENST00000533778 GIGYF1O75420 1035 aaPredicted RBP25.8■■□□□ 1.72
CHEK1-215ENST00000533778 ZNF853P0CG23 659 aa25.8■■□□□ 1.72
CHEK1-215ENST00000533778 WDR63Q8IWG1 891 aa25.8■■□□□ 1.72
CHEK1-215ENST00000533778 MTFR1LQ9H019 292 aa25.8■■□□□ 1.72
CHEK1-215ENST00000533778 SPON1Q9HCB6 807 aa25.8■■□□□ 1.72
CHEK1-215ENST00000533778 USP16Q9Y5T5 823 aa25.79■■□□□ 1.72
CHEK1-215ENST00000533778 IL16Q14005 1332 aa25.79■■□□□ 1.72
CHEK1-215ENST00000533778 TJP1Q07157 1748 aa25.78■■□□□ 1.72
CHEK1-215ENST00000533778 ZBTB7AO95365 584 aa25.78■■□□□ 1.72
CHEK1-215ENST00000533778 RFC4P35249 363 aa25.77■■□□□ 1.72
CHEK1-215ENST00000533778 NPM2Q86SE8 214 aaKnown RBP25.77■■□□□ 1.72
CHEK1-215ENST00000533778 AMIGO3Q86WK7 504 aa25.77■■□□□ 1.72
CHEK1-215ENST00000533778 MBIPQ9NS73 344 aa25.77■■□□□ 1.72
CHEK1-215ENST00000533778 ZBTB1Q9Y2K1 713 aa25.77■■□□□ 1.72
CHEK1-215ENST00000533778 PRAMEF22A3QJZ6 481 aa25.76■■□□□ 1.71
CHEK1-215ENST00000533778 CANXP27824 592 aaKnown RBP25.76■■□□□ 1.71
CHEK1-215ENST00000533778 ARHGEF1Q92888 912 aaKnown RBP25.76■■□□□ 1.71
CHEK1-215ENST00000533778 COL5A3P25940 1745 aaPredicted RBP25.76■■□□□ 1.71
CHEK1-215ENST00000533778 SOS1Q07889 1333 aaPredicted RBP25.75■■□□□ 1.71
CHEK1-215ENST00000533778 KDM3BQ7LBC6 1761 aa25.74■■□□□ 1.71
CHEK1-215ENST00000533778 QSER1Q2KHR3 1735 aa25.74■■□□□ 1.71
CHEK1-215ENST00000533778 A0A087WZG4 1122 aa25.74■■□□□ 1.71
CHEK1-215ENST00000533778 A1BGP04217 495 aa25.74■■□□□ 1.71
CHEK1-215ENST00000533778 IL6STP40189 918 aaPredicted RBP25.74■■□□□ 1.71
CHEK1-215ENST00000533778 SMIM5Q71RC9 77 aa25.74■■□□□ 1.71
CHEK1-215ENST00000533778 ATF5Q9Y2D1 282 aaPredicted RBP25.74■■□□□ 1.71
CHEK1-215ENST00000533778 CASZ1Q86V15 1759 aa25.72■■□□□ 1.71
CHEK1-215ENST00000533778 HOXB7P09629 217 aa25.72■■□□□ 1.71
CHEK1-215ENST00000533778 EIF5P55010 431 aaKnown RBP25.72■■□□□ 1.71
CHEK1-215ENST00000533778 POLD1P28340 1107 aa25.71■■□□□ 1.71
CHEK1-215ENST00000533778 ERBB4Q15303 1308 aa25.7■■□□□ 1.71
CHEK1-215ENST00000533778 ZPR1O75312 459 aa25.7■■□□□ 1.7
CHEK1-215ENST00000533778 CHMP4AQ9BY43 222 aa25.7■■□□□ 1.7
CHEK1-215ENST00000533778 COL15A1P39059 1388 aa25.69■■□□□ 1.7
CHEK1-215ENST00000533778 UBR3Q6ZT12 1888 aa25.69■■□□□ 1.7
CHEK1-215ENST00000533778 NLGN1Q8N2Q7 840 aa25.69■■□□□ 1.7
CHEK1-215ENST00000533778 ZNF330Q9Y3S2 320 aaPredicted RBP25.69■■□□□ 1.7
CHEK1-215ENST00000533778 EIF2S2P20042 333 aaKnown RBP25.68■■□□□ 1.7
CHEK1-215ENST00000533778 MYH16Q9H6N6 1097 aa25.68■■□□□ 1.7
CHEK1-215ENST00000533778 DUSP27Q5VZP5 1158 aa25.67■■□□□ 1.7
CHEK1-215ENST00000533778 NARFQ9UHQ1 456 aa25.67■■□□□ 1.7
CHEK1-215ENST00000533778 ZNF521Q96K83 1311 aa25.66■■□□□ 1.7
CHEK1-215ENST00000533778 USP42Q9H9J4 1324 aaKnown RBP25.66■■□□□ 1.7
CHEK1-215ENST00000533778 TUBGCP6Q96RT7 1819 aa25.66■■□□□ 1.7
CHEK1-215ENST00000533778 PTGER2P43116 358 aa25.66■■□□□ 1.7
CHEK1-215ENST00000533778 GOLGA2Q08379 1002 aa25.66■■□□□ 1.7
CHEK1-215ENST00000533778 KRT24Q2M2I5 525 aa25.66■■□□□ 1.7
CHEK1-215ENST00000533778 TSR2Q969E8 191 aaKnown RBP25.66■■□□□ 1.7
CHEK1-215ENST00000533778 PPP1R1BQ9UD71 204 aaPredicted RBP25.66■■□□□ 1.7
CHEK1-215ENST00000533778 MYH14Q7Z406 1995 aaKnown RBP25.65■■□□□ 1.7
CHEK1-215ENST00000533778 NBPF26B4DH59 902 aa25.65■■□□□ 1.7
CHEK1-215ENST00000533778 MSL1Q68DK7 614 aa25.65■■□□□ 1.7
CHEK1-215ENST00000533778 NBPF10Q6P3W6 841 aaKnown RBP25.65■■□□□ 1.7
CHEK1-215ENST00000533778 NBPF15Q8N660 670 aa25.65■■□□□ 1.7
CHEK1-215ENST00000533778 ARXQ96QS3 562 aa25.65■■□□□ 1.7
CHEK1-215ENST00000533778 GYS1P13807 737 aa25.64■■□□□ 1.7
CHEK1-215ENST00000533778 HDGFL1Q5TGJ6 251 aa25.64■■□□□ 1.7
CHEK1-215ENST00000533778 SGIP1Q9BQI5 828 aa25.64■■□□□ 1.7
CHEK1-215ENST00000533778 PIP4K2AP48426 406 aaPredicted RBP25.63■■□□□ 1.69
CHEK1-215ENST00000533778 USPL1Q5W0Q7 1092 aa25.63■■□□□ 1.69
CHEK1-215ENST00000533778 SRP68Q9UHB9 627 aaKnown RBP25.63■■□□□ 1.69
CHEK1-215ENST00000533778 FANCIQ9NVI1 1328 aa25.63■■□□□ 1.69
CHEK1-215ENST00000533778 DZIP3Q86Y13 1208 aaKnown RBP25.62■■□□□ 1.69
CHEK1-215ENST00000533778 C8orf58Q8NAV2 365 aa25.62■■□□□ 1.69
CHEK1-215ENST00000533778 LRP5O75197 1615 aa25.62■■□□□ 1.69
CHEK1-215ENST00000533778 ELL2O00472 640 aaPredicted RBP25.61■■□□□ 1.69
CHEK1-215ENST00000533778 MYL6BP14649 208 aa25.61■■□□□ 1.69
CHEK1-215ENST00000533778 TBC1D2BQ9UPU7 963 aa25.61■■□□□ 1.69
CHEK1-215ENST00000533778 E9PSI1 815 aa25.6■■□□□ 1.69
CHEK1-215ENST00000533778 DBF4Q9UBU7 674 aaPredicted RBP25.6■■□□□ 1.69
CHEK1-215ENST00000533778 NECTIN2Q92692 538 aa25.59■■□□□ 1.69
CHEK1-215ENST00000533778 DDX21Q9NR30 783 aaKnown RBP eCLIP25.59■■□□□ 1.69
CHEK1-215ENST00000533778 LAMB4A4D0S4 1761 aa25.59■■□□□ 1.69
CHEK1-215ENST00000533778 RGL2O15211 777 aa25.58■■□□□ 1.69
CHEK1-215ENST00000533778 FKBP8Q14318 412 aa25.58■■□□□ 1.69
CHEK1-215ENST00000533778 PDIA6Q15084 440 aa25.58■■□□□ 1.69
CHEK1-215ENST00000533778 TWISTNBQ3B726 338 aaPredicted RBP25.58■■□□□ 1.69
CHEK1-215ENST00000533778 SPINK5Q9NQ38 1064 aaPredicted RBP25.58■■□□□ 1.69
CHEK1-215ENST00000533778 MMP10P09238 476 aa25.57■■□□□ 1.68
CHEK1-215ENST00000533778 CCDC30Q5VVM6 783 aa25.57■■□□□ 1.68
CHEK1-215ENST00000533778 KIF6Q6ZMV9 814 aa25.57■■□□□ 1.68
CHEK1-215ENST00000533778 ZNF652Q9Y2D9 606 aa25.57■■□□□ 1.68
CHEK1-215ENST00000533778 CAMTA2O94983 1202 aa25.56■■□□□ 1.68
CHEK1-215ENST00000533778 HNRNPUQ00839 825 aaKnown RBP eCLIP25.56■■□□□ 1.68
CHEK1-215ENST00000533778 CLEC4GQ6UXB4 293 aa25.56■■□□□ 1.68
CHEK1-215ENST00000533778 TSPYL6Q8N831 410 aa25.56■■□□□ 1.68
CHEK1-215ENST00000533778 HYPKQ9NX55 129 aa25.55■■□□□ 1.68
CHEK1-215ENST00000533778 CHPF2Q9P2E5 772 aa25.55■■□□□ 1.68
CHEK1-215ENST00000533778 PARP3Q9Y6F1 533 aa25.55■■□□□ 1.68
CHEK1-215ENST00000533778 ERVV-1B6SEH8 477 aa25.54■■□□□ 1.68
CHEK1-215ENST00000533778 EXOSC9Q06265 439 aaKnown RBP25.54■■□□□ 1.68
CHEK1-215ENST00000533778 SLFN5Q08AF3 891 aa25.54■■□□□ 1.68
CHEK1-215ENST00000533778 BCL2L12Q9HB09 334 aa25.54■■□□□ 1.68
CHEK1-215ENST00000533778 TM4SF1P30408 202 aa25.53■■□□□ 1.68
CHEK1-215ENST00000533778 PROSER3Q2NL68 480 aa25.53■■□□□ 1.68
CHEK1-215ENST00000533778 LRP10Q7Z4F1 713 aa25.53■■□□□ 1.68
CHEK1-215ENST00000533778 C4AP0C0L4 1744 aa25.52■■□□□ 1.68
CHEK1-215ENST00000533778 STK31Q9BXU1 1019 aa25.52■■□□□ 1.68
CHEK1-215ENST00000533778 MAP3K15Q6ZN16 1313 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms