RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 SOS1Q07889 1333 aaPredicted RBP28.26■■■□□ 2.11
VPS51-212ENST00000533656 PNPLA7Q6ZV29 1317 aa28.26■■■□□ 2.11
VPS51-212ENST00000533656 FANCIQ9NVI1 1328 aa28.25■■■□□ 2.11
VPS51-212ENST00000533656 HOXB7P09629 217 aa28.25■■■□□ 2.11
VPS51-212ENST00000533656 ITPK1Q13572 414 aa28.25■■■□□ 2.11
VPS51-212ENST00000533656 FHDC1Q9C0D6 1143 aaPredicted RBP28.25■■■□□ 2.11
VPS51-212ENST00000533656 GIGYF1O75420 1035 aaPredicted RBP28.24■■■□□ 2.11
VPS51-212ENST00000533656 STARD3NLO95772 234 aa28.24■■■□□ 2.11
VPS51-212ENST00000533656 SLFN5Q08AF3 891 aa28.24■■■□□ 2.11
VPS51-212ENST00000533656 DNAJC10Q8IXB1 793 aa28.23■■■□□ 2.11
VPS51-212ENST00000533656 TSR2Q969E8 191 aaKnown RBP28.23■■■□□ 2.11
VPS51-212ENST00000533656 SPINK5Q9NQ38 1064 aaPredicted RBP28.23■■■□□ 2.11
VPS51-212ENST00000533656 TJP1Q07157 1748 aa28.23■■■□□ 2.11
VPS51-212ENST00000533656 CHMP4AQ9BY43 222 aa28.22■■■□□ 2.11
VPS51-212ENST00000533656 CNTNAP4Q9C0A0 1308 aa28.21■■■□□ 2.11
VPS51-212ENST00000533656 RC3H1Q5TC82 1133 aaKnown RBP28.21■■■□□ 2.11
VPS51-212ENST00000533656 LINC00116Q8NCU8 138 aa28.21■■■□□ 2.11
VPS51-212ENST00000533656 SYT17Q9BSW7 474 aa28.2■■■□□ 2.1
VPS51-212ENST00000533656 COL5A3P25940 1745 aaPredicted RBP28.19■■■□□ 2.1
VPS51-212ENST00000533656 CYP19A1P11511 503 aaPredicted RBP28.19■■■□□ 2.1
VPS51-212ENST00000533656 TRMT2AQ8IZ69 625 aaKnown RBP28.19■■■□□ 2.1
VPS51-212ENST00000533656 ARXQ96QS3 562 aa28.18■■■□□ 2.1
VPS51-212ENST00000533656 TFCP2L1Q9NZI6 479 aa28.18■■■□□ 2.1
VPS51-212ENST00000533656 C4BP0C0L5 1744 aa28.18■■■□□ 2.1
VPS51-212ENST00000533656 YY1P25490 414 aa28.17■■■□□ 2.1
VPS51-212ENST00000533656 DUSP27Q5VZP5 1158 aa28.17■■■□□ 2.1
VPS51-212ENST00000533656 AK7Q96M32 723 aa28.17■■■□□ 2.1
VPS51-212ENST00000533656 LAMB4A4D0S4 1761 aa28.16■■■□□ 2.1
VPS51-212ENST00000533656 CRKLP46109 303 aaKnown RBP28.16■■■□□ 2.1
VPS51-212ENST00000533656 CDCA7LQ96GN5 454 aa28.16■■■□□ 2.1
VPS51-212ENST00000533656 CCDC87Q9NVE4 849 aa28.16■■■□□ 2.1
VPS51-212ENST00000533656 ERBB4Q15303 1308 aa28.16■■■□□ 2.1
VPS51-212ENST00000533656 USP16Q9Y5T5 823 aa28.15■■■□□ 2.1
VPS51-212ENST00000533656 PRAMEF22A3QJZ6 481 aa28.14■■■□□ 2.1
VPS51-212ENST00000533656 KRT24Q2M2I5 525 aa28.14■■■□□ 2.1
VPS51-212ENST00000533656 C8orf58Q8NAV2 365 aa28.14■■■□□ 2.1
VPS51-212ENST00000533656 GOLGB1Q14789 3259 aaKnown RBP28.14■■■□□ 2.09
VPS51-212ENST00000533656 EXOSC9Q06265 439 aaKnown RBP28.13■■■□□ 2.09
VPS51-212ENST00000533656 TWISTNBQ3B726 338 aaPredicted RBP28.13■■■□□ 2.09
VPS51-212ENST00000533656 UBR3Q6ZT12 1888 aa28.12■■■□□ 2.09
VPS51-212ENST00000533656 DCAF8L1A6NGE4 600 aa28.12■■■□□ 2.09
VPS51-212ENST00000533656 SLC16A10Q8TF71 515 aa28.12■■■□□ 2.09
VPS51-212ENST00000533656 HDGFL1Q5TGJ6 251 aa28.11■■■□□ 2.09
VPS51-212ENST00000533656 INTS5Q6P9B9 1019 aaKnown RBP28.11■■■□□ 2.09
VPS51-212ENST00000533656 FLAD1Q8NFF5 587 aa28.11■■■□□ 2.09
VPS51-212ENST00000533656 CHD4Q14839 1912 aa28.11■■■□□ 2.09
VPS51-212ENST00000533656 GNPATO15228 680 aa28.1■■■□□ 2.09
VPS51-212ENST00000533656 RPS6KA4O75676 772 aa28.1■■■□□ 2.09
VPS51-212ENST00000533656 CT47B1P0C2W7 299 aaPredicted RBP28.1■■■□□ 2.09
VPS51-212ENST00000533656 SSFA2P28290 1259 aa28.1■■■□□ 2.09
VPS51-212ENST00000533656 YTHDC1Q96MU7 727 aaKnown RBP28.1■■■□□ 2.09
VPS51-212ENST00000533656 RTCBQ9Y3I0 505 aaKnown RBP28.1■■■□□ 2.09
VPS51-212ENST00000533656 ADRA2BP18089 450 aa28.09■■■□□ 2.09
VPS51-212ENST00000533656 COL23A1Q86Y22 540 aaPredicted RBP28.09■■■□□ 2.09
VPS51-212ENST00000533656 TSPYL6Q8N831 410 aa28.09■■■□□ 2.09
VPS51-212ENST00000533656 ZBTB1Q9Y2K1 713 aa28.09■■■□□ 2.09
VPS51-212ENST00000533656 ELL2O00472 640 aaPredicted RBP28.08■■■□□ 2.09
VPS51-212ENST00000533656 EIF2S2P20042 333 aaKnown RBP28.08■■■□□ 2.09
VPS51-212ENST00000533656 IL6STP40189 918 aaPredicted RBP28.08■■■□□ 2.09
VPS51-212ENST00000533656 CCDC30Q5VVM6 783 aa28.07■■■□□ 2.08
VPS51-212ENST00000533656 ZNF428Q96B54 188 aa28.07■■■□□ 2.08
VPS51-212ENST00000533656 A1BGP04217 495 aa28.06■■■□□ 2.08
VPS51-212ENST00000533656 NPM2Q86SE8 214 aaKnown RBP28.06■■■□□ 2.08
VPS51-212ENST00000533656 KLHL34Q8N239 644 aa28.06■■■□□ 2.08
VPS51-212ENST00000533656 MSH5O43196 834 aa28.05■■■□□ 2.08
VPS51-212ENST00000533656 VAMP4O75379 141 aa28.05■■■□□ 2.08
VPS51-212ENST00000533656 POLD1P28340 1107 aa28.05■■■□□ 2.08
VPS51-212ENST00000533656 AMIGO3Q86WK7 504 aa28.05■■■□□ 2.08
VPS51-212ENST00000533656 DBF4Q9UBU7 674 aaPredicted RBP28.05■■■□□ 2.08
VPS51-212ENST00000533656 CANXP27824 592 aaKnown RBP28.04■■■□□ 2.08
VPS51-212ENST00000533656 EIF5P55010 431 aaKnown RBP28.04■■■□□ 2.08
VPS51-212ENST00000533656 MSL1Q68DK7 614 aa28.04■■■□□ 2.08
VPS51-212ENST00000533656 DDX21Q9NR30 783 aaKnown RBP eCLIP28.04■■■□□ 2.08
VPS51-212ENST00000533656 MYH14Q7Z406 1995 aaKnown RBP28.03■■■□□ 2.08
VPS51-212ENST00000533656 A0A087WZG4 1122 aa28.03■■■□□ 2.08
VPS51-212ENST00000533656 COL15A1P39059 1388 aa28.02■■■□□ 2.08
VPS51-212ENST00000533656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.02■■■□□ 2.08
VPS51-212ENST00000533656 NBPF26B4DH59 902 aa28.02■■■□□ 2.08
VPS51-212ENST00000533656 TRAPPC3LQ5T215 181 aa28.02■■■□□ 2.08
VPS51-212ENST00000533656 NBPF10Q6P3W6 841 aaKnown RBP28.02■■■□□ 2.08
VPS51-212ENST00000533656 SMIM5Q71RC9 77 aa28.02■■■□□ 2.08
VPS51-212ENST00000533656 NBPF15Q8N660 670 aa28.02■■■□□ 2.08
VPS51-212ENST00000533656 STK31Q9BXU1 1019 aa28.02■■■□□ 2.08
VPS51-212ENST00000533656 NLGN2Q8NFZ4 835 aa28.01■■■□□ 2.07
VPS51-212ENST00000533656 PDIA6Q15084 440 aa28■■■□□ 2.07
VPS51-212ENST00000533656 NECTIN2Q92692 538 aa28■■■□□ 2.07
VPS51-212ENST00000533656 HYPKQ9NX55 129 aa28■■■□□ 2.07
VPS51-212ENST00000533656 CHPF2Q9P2E5 772 aa28■■■□□ 2.07
VPS51-212ENST00000533656 PHF14O94880 888 aa27.98■■■□□ 2.07
VPS51-212ENST00000533656 MYL6BP14649 208 aa27.97■■■□□ 2.07
VPS51-212ENST00000533656 RFC4P35249 363 aa27.97■■■□□ 2.07
VPS51-212ENST00000533656 ARHGEF1Q92888 912 aaKnown RBP27.97■■■□□ 2.07
VPS51-212ENST00000533656 ALDH1L2Q3SY69 923 aa27.96■■■□□ 2.07
VPS51-212ENST00000533656 LRP10Q7Z4F1 713 aa27.96■■■□□ 2.07
VPS51-212ENST00000533656 ZNF330Q9Y3S2 320 aaPredicted RBP27.96■■■□□ 2.07
VPS51-212ENST00000533656 RGL2O15211 777 aa27.95■■■□□ 2.06
VPS51-212ENST00000533656 PIP4K2AP48426 406 aaPredicted RBP27.95■■■□□ 2.06
VPS51-212ENST00000533656 PROSER3Q2NL68 480 aa27.94■■■□□ 2.06
VPS51-212ENST00000533656 DZIP3Q86Y13 1208 aaKnown RBP27.93■■■□□ 2.06
VPS51-212ENST00000533656 NARFQ9UHQ1 456 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms