RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 CASZ1Q86V15 1759 aa17.33■□□□□ 0.36
TRAPPC4-214ENST00000533632 LINC00116Q8NCU8 138 aa17.33■□□□□ 0.36
TRAPPC4-214ENST00000533632 RBM42Q9BTD8 480 aaKnown RBP17.33■□□□□ 0.36
TRAPPC4-214ENST00000533632 GIGYF1O75420 1035 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC4-214ENST00000533632 ATP6V1AP38606 617 aa17.32■□□□□ 0.36
TRAPPC4-214ENST00000533632 ERICH6BQ5W0A0 696 aa17.32■□□□□ 0.36
TRAPPC4-214ENST00000533632 VAMP4O75379 141 aa17.31■□□□□ 0.36
TRAPPC4-214ENST00000533632 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC4-214ENST00000533632 FMNL2Q96PY5 1086 aa17.31■□□□□ 0.36
TRAPPC4-214ENST00000533632 R3HDM1Q15032 1099 aaKnown RBP17.3■□□□□ 0.36
TRAPPC4-214ENST00000533632 SLC15A2Q16348 729 aa17.3■□□□□ 0.36
TRAPPC4-214ENST00000533632 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC4-214ENST00000533632 AMIGO3Q86WK7 504 aa17.3■□□□□ 0.36
TRAPPC4-214ENST00000533632 FKBP8Q14318 412 aa17.29■□□□□ 0.36
TRAPPC4-214ENST00000533632 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
TRAPPC4-214ENST00000533632 SRCAPQ6ZRS2 3230 aa17.28■□□□□ 0.36
TRAPPC4-214ENST00000533632 NBPF14Q5TI25 921 aa17.28■□□□□ 0.36
TRAPPC4-214ENST00000533632 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
TRAPPC4-214ENST00000533632 PDGFDQ9GZP0 370 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC4-214ENST00000533632 USP16Q9Y5T5 823 aa17.28■□□□□ 0.36
TRAPPC4-214ENST00000533632 HOXB7P09629 217 aa17.27■□□□□ 0.35
TRAPPC4-214ENST00000533632 SNRPA1P09661 255 aaKnown RBP17.27■□□□□ 0.35
TRAPPC4-214ENST00000533632 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.35
TRAPPC4-214ENST00000533632 NECTIN2Q92692 538 aa17.27■□□□□ 0.35
TRAPPC4-214ENST00000533632 STK32BQ9NY57 414 aa17.27■□□□□ 0.35
TRAPPC4-214ENST00000533632 TCERG1O14776 1098 aaKnown RBP17.26■□□□□ 0.35
TRAPPC4-214ENST00000533632 CT47B1P0C2W7 299 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 PNPLA7Q6ZV29 1317 aa17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 C4AP0C0L4 1744 aa17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 CYP19A1P11511 503 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 EIF2S2P20042 333 aaKnown RBP17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 SSH1Q8WYL5 1049 aa17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 SOS1Q07889 1333 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 CNTNAP4Q9C0A0 1308 aa17.25■□□□□ 0.35
TRAPPC4-214ENST00000533632 HDGFL1Q5TGJ6 251 aa17.24■□□□□ 0.35
TRAPPC4-214ENST00000533632 BCAR3O75815 825 aa17.23■□□□□ 0.35
TRAPPC4-214ENST00000533632 CRKLP46109 303 aaKnown RBP17.23■□□□□ 0.35
TRAPPC4-214ENST00000533632 RC3H1Q5TC82 1133 aaKnown RBP17.23■□□□□ 0.35
TRAPPC4-214ENST00000533632 INTS5Q6P9B9 1019 aaKnown RBP17.23■□□□□ 0.35
TRAPPC4-214ENST00000533632 CACNA1FO60840 1977 aa17.23■□□□□ 0.35
TRAPPC4-214ENST00000533632 COL24A1Q17RW2 1714 aa17.23■□□□□ 0.35
TRAPPC4-214ENST00000533632 PIP4K2AP48426 406 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC4-214ENST00000533632 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
TRAPPC4-214ENST00000533632 PDIA6Q15084 440 aa17.22■□□□□ 0.35
TRAPPC4-214ENST00000533632 TFCP2L1Q9NZI6 479 aa17.22■□□□□ 0.35
TRAPPC4-214ENST00000533632 CHPF2Q9P2E5 772 aa17.22■□□□□ 0.35
TRAPPC4-214ENST00000533632 ANXA1P04083 346 aa17.21■□□□□ 0.35
TRAPPC4-214ENST00000533632 COL23A1Q86Y22 540 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC4-214ENST00000533632 AK7Q96M32 723 aa17.21■□□□□ 0.35
TRAPPC4-214ENST00000533632 NBPF26B4DH59 902 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 GNPATO15228 680 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 A1BGP04217 495 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 NBPF10Q6P3W6 841 aaKnown RBP17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 NBPF15Q8N660 670 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 ZNF428Q96B54 188 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 ZBTB1Q9Y2K1 713 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 LRP10Q7Z4F1 713 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 MRPL50Q8N5N7 158 aaKnown RBP17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
TRAPPC4-214ENST00000533632 RPS6KA4O75676 772 aa17.19■□□□□ 0.34
TRAPPC4-214ENST00000533632 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-214ENST00000533632 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
TRAPPC4-214ENST00000533632 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.18■□□□□ 0.34
TRAPPC4-214ENST00000533632 HMGB2P26583 209 aaKnown RBP17.18■□□□□ 0.34
TRAPPC4-214ENST00000533632 SSFA2P28290 1259 aa17.18■□□□□ 0.34
TRAPPC4-214ENST00000533632 G2E3Q7L622 706 aa17.18■□□□□ 0.34
TRAPPC4-214ENST00000533632 STARD3NLO95772 234 aa17.17■□□□□ 0.34
TRAPPC4-214ENST00000533632 SLC4A2P04920 1241 aa17.17■□□□□ 0.34
TRAPPC4-214ENST00000533632 PHF14O94880 888 aa17.17■□□□□ 0.34
TRAPPC4-214ENST00000533632 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
TRAPPC4-214ENST00000533632 DDX21Q9NR30 783 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRAPPC4-214ENST00000533632 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC4-214ENST00000533632 MYL6BP14649 208 aa17.16■□□□□ 0.34
TRAPPC4-214ENST00000533632 BRPF1P55201 1214 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC4-214ENST00000533632 RRP1P56182 461 aaKnown RBP17.16■□□□□ 0.34
TRAPPC4-214ENST00000533632 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
TRAPPC4-214ENST00000533632 RTCBQ9Y3I0 505 aaKnown RBP17.16■□□□□ 0.34
TRAPPC4-214ENST00000533632 LRP5O75197 1615 aa17.16■□□□□ 0.34
TRAPPC4-214ENST00000533632 ERBB4Q15303 1308 aa17.16■□□□□ 0.34
TRAPPC4-214ENST00000533632 ARHGEF1Q92888 912 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-214ENST00000533632 PLIN1O60240 522 aa17.15■□□□□ 0.34
TRAPPC4-214ENST00000533632 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-214ENST00000533632 EIF5P55010 431 aaKnown RBP17.15■□□□□ 0.34
TRAPPC4-214ENST00000533632 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
TRAPPC4-214ENST00000533632 FLAD1Q8NFF5 587 aa17.14■□□□□ 0.33
TRAPPC4-214ENST00000533632 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.33
TRAPPC4-214ENST00000533632 TNNQ9UQP3 1299 aa17.14■□□□□ 0.33
TRAPPC4-214ENST00000533632 COL15A1P39059 1388 aa17.14■□□□□ 0.33
TRAPPC4-214ENST00000533632 BCORQ6W2J9 1755 aa17.14■□□□□ 0.33
TRAPPC4-214ENST00000533632 ADRA2BP18089 450 aa17.13■□□□□ 0.33
TRAPPC4-214ENST00000533632 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
TRAPPC4-214ENST00000533632 FLIIQ13045 1269 aa17.12■□□□□ 0.33
TRAPPC4-214ENST00000533632 TRAPPC3LQ5T215 181 aa17.12■□□□□ 0.33
TRAPPC4-214ENST00000533632 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms