RNA–Protein interactions for RNA: ENST00000533328.5

SERGEF-223, Transcript of secretion regulating guanine nucleotide exchange factor, human

TSL 5

Gene SERGEF, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERGEF-223	ENST00000533328	TEX13A	Q9BXU3	409 aa	Predicted RBP	27.83	■■■□□ 2.05
SERGEF-223	ENST00000533328	MSL1	Q68DK7	614 aa		27.81	■■■□□ 2.04
SERGEF-223	ENST00000533328	PPP1R1B	Q9UD71	204 aa	Predicted RBP	27.81	■■■□□ 2.04
SERGEF-223	ENST00000533328	ZBTB1	Q9Y2K1	713 aa		27.81	■■■□□ 2.04
SERGEF-223	ENST00000533328	SOS1	Q07889	1333 aa	Predicted RBP	27.81	■■■□□ 2.04
SERGEF-223	ENST00000533328	PRAMEF22	A3QJZ6	481 aa		27.8	■■■□□ 2.04
SERGEF-223	ENST00000533328	STARD3NL	O95772	234 aa		27.8	■■■□□ 2.04
SERGEF-223	ENST00000533328	ARX	Q96QS3	562 aa		27.8	■■■□□ 2.04
SERGEF-223	ENST00000533328	USP16	Q9Y5T5	823 aa		27.79	■■■□□ 2.04
SERGEF-223	ENST00000533328	SNRPA1	P09661	255 aa	Known RBP	27.78	■■■□□ 2.04
SERGEF-223	ENST00000533328	BABAM1	Q9NWV8	329 aa		27.78	■■■□□ 2.04
SERGEF-223	ENST00000533328	POLD1	P28340	1107 aa		27.77	■■■□□ 2.04
SERGEF-223	ENST00000533328	EIF4A1	P60842	406 aa	Known RBP	27.77	■■■□□ 2.04
SERGEF-223	ENST00000533328	LAMB4	A4D0S4	1761 aa		27.76	■■■□□ 2.03
SERGEF-223	ENST00000533328	A1BG	P04217	495 aa		27.75	■■■□□ 2.03
SERGEF-223	ENST00000533328	GYS1	P13807	737 aa		27.75	■■■□□ 2.03
SERGEF-223	ENST00000533328	RFC4	P35249	363 aa		27.75	■■■□□ 2.03
SERGEF-223	ENST00000533328	EIF5	P55010	431 aa	Known RBP	27.75	■■■□□ 2.03
SERGEF-223	ENST00000533328	CANX	P27824	592 aa	Known RBP	27.74	■■■□□ 2.03
SERGEF-223	ENST00000533328	TSPYL4	Q9UJ04	414 aa		27.74	■■■□□ 2.03
SERGEF-223	ENST00000533328	COL15A1	P39059	1388 aa		27.73	■■■□□ 2.03
SERGEF-223	ENST00000533328	USP42	Q9H9J4	1324 aa	Known RBP	27.73	■■■□□ 2.03
SERGEF-223	ENST00000533328	CHL1	O00533	1208 aa		27.73	■■■□□ 2.03
SERGEF-223	ENST00000533328	GIGYF1	O75420	1035 aa	Predicted RBP	27.73	■■■□□ 2.03
SERGEF-223	ENST00000533328	FHDC1	Q9C0D6	1143 aa	Predicted RBP	27.73	■■■□□ 2.03
SERGEF-223	ENST00000533328	SRP68	Q9UHB9	627 aa	Known RBP	27.73	■■■□□ 2.03
SERGEF-223	ENST00000533328	SYT17	Q9BSW7	474 aa		27.71	■■■□□ 2.03
SERGEF-223	ENST00000533328	IL6ST	P40189	918 aa	Predicted RBP	27.7	■■■□□ 2.02
SERGEF-223	ENST00000533328	NLGN1	Q8N2Q7	840 aa		27.7	■■■□□ 2.02
SERGEF-223	ENST00000533328	NARF	Q9UHQ1	456 aa		27.69	■■■□□ 2.02
SERGEF-223	ENST00000533328	NBPF26	B4DH59	902 aa		27.68	■■■□□ 2.02
SERGEF-223	ENST00000533328	ZNF853	P0CG23	659 aa		27.68	■■■□□ 2.02
SERGEF-223	ENST00000533328	NBPF10	Q6P3W6	841 aa	Known RBP	27.68	■■■□□ 2.02
SERGEF-223	ENST00000533328	NBPF15	Q8N660	670 aa		27.68	■■■□□ 2.02
SERGEF-223	ENST00000533328	FKBP8	Q14318	412 aa		27.67	■■■□□ 2.02
SERGEF-223	ENST00000533328	NCBP3	Q53F19	620 aa	Known RBP	27.67	■■■□□ 2.02
SERGEF-223	ENST00000533328	BCL2L12	Q9HB09	334 aa		27.67	■■■□□ 2.02
SERGEF-223	ENST00000533328	PIP4K2A	P48426	406 aa	Predicted RBP	27.66	■■■□□ 2.02
SERGEF-223	ENST00000533328	CCDC27	Q2M243	656 aa		27.66	■■■□□ 2.02
SERGEF-223	ENST00000533328	USPL1	Q5W0Q7	1092 aa		27.66	■■■□□ 2.02
SERGEF-223	ENST00000533328	CFAP44	Q96MT7	982 aa		27.66	■■■□□ 2.02
SERGEF-223	ENST00000533328	MMP10	P09238	476 aa		27.65	■■■□□ 2.02
SERGEF-223	ENST00000533328	FAM9B	Q8IZU0	186 aa		27.65	■■■□□ 2.02
SERGEF-223	ENST00000533328		A0A087WZG4	1122 aa		27.64	■■■□□ 2.02
SERGEF-223	ENST00000533328	SENP3-EIF4A1	A0A087X0R7	540 aa		27.64	■■■□□ 2.02
SERGEF-223	ENST00000533328	ZPR1	O75312	459 aa		27.64	■■■□□ 2.02
SERGEF-223	ENST00000533328	LAS1L	Q9Y4W2	734 aa	Known RBP	27.64	■■■□□ 2.02
SERGEF-223	ENST00000533328	SCN7A	Q01118	1682 aa		27.64	■■■□□ 2.02
SERGEF-223	ENST00000533328	TM4SF1	P30408	202 aa		27.63	■■■□□ 2.01
SERGEF-223	ENST00000533328	BCOR	Q6W2J9	1755 aa		27.63	■■■□□ 2.01
SERGEF-223	ENST00000533328	IFT57	Q9NWB7	429 aa		27.62	■■■□□ 2.01
SERGEF-223	ENST00000533328	KIF13B	Q9NQT8	1826 aa		27.62	■■■□□ 2.01
SERGEF-223	ENST00000533328	KRT24	Q2M2I5	525 aa		27.61	■■■□□ 2.01
SERGEF-223	ENST00000533328	WWC1	Q8IX03	1113 aa		27.61	■■■□□ 2.01
SERGEF-223	ENST00000533328	TBC1D2B	Q9UPU7	963 aa		27.61	■■■□□ 2.01
SERGEF-223	ENST00000533328	CCER2	I3L3R5	266 aa		27.6	■■■□□ 2.01
SERGEF-223	ENST00000533328	CALD1	Q05682	793 aa	Known RBP	27.6	■■■□□ 2.01
SERGEF-223	ENST00000533328	MBIP	Q9NS73	344 aa		27.6	■■■□□ 2.01
SERGEF-223	ENST00000533328	CD2AP	Q9Y5K6	639 aa		27.6	■■■□□ 2.01
SERGEF-223	ENST00000533328	DDR1	Q08345	913 aa		27.59	■■■□□ 2.01
SERGEF-223	ENST00000533328	NLGN2	Q8NFZ4	835 aa		27.59	■■■□□ 2.01
SERGEF-223	ENST00000533328	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.59	■■■□□ 2.01
SERGEF-223	ENST00000533328	CAMTA2	O94983	1202 aa		27.58	■■■□□ 2.01
SERGEF-223	ENST00000533328	GNAI1	P63096	354 aa		27.58	■■■□□ 2.01
SERGEF-223	ENST00000533328	DIEXF	Q68CQ4	756 aa	Known RBP	27.58	■■■□□ 2.01
SERGEF-223	ENST00000533328	KLHL34	Q8N239	644 aa		27.58	■■■□□ 2.01
SERGEF-223	ENST00000533328	AFDN	P55196	1824 aa	Known RBP	27.57	■■■□□ 2
SERGEF-223	ENST00000533328	NRXN2	Q9P2S2	1712 aa		27.57	■■■□□ 2
SERGEF-223	ENST00000533328	KIAA1551	Q9HCM1	1747 aa		27.56	■■■□□ 2
SERGEF-223	ENST00000533328	NFIX	Q14938	502 aa		27.56	■■■□□ 2
SERGEF-223	ENST00000533328	PDIA6	Q15084	440 aa		27.56	■■■□□ 2
SERGEF-223	ENST00000533328	DZIP3	Q86Y13	1208 aa	Known RBP	27.56	■■■□□ 2
SERGEF-223	ENST00000533328	PARP3	Q9Y6F1	533 aa		27.56	■■■□□ 2
SERGEF-223	ENST00000533328	ERBB4	Q15303	1308 aa		27.56	■■■□□ 2
SERGEF-223	ENST00000533328	POLRMT	O00411	1230 aa	Known RBP	27.55	■■■□□ 2
SERGEF-223	ENST00000533328	LRP10	Q7Z4F1	713 aa		27.55	■■■□□ 2
SERGEF-223	ENST00000533328	C10orf71	Q711Q0	1435 aa		27.54	■■■□□ 2
SERGEF-223	ENST00000533328	EIF2S2	P20042	333 aa	Known RBP	27.53	■■■□□ 2
SERGEF-223	ENST00000533328	NPM2	Q86SE8	214 aa	Known RBP	27.53	■■■□□ 2
SERGEF-223	ENST00000533328	IL16	Q14005	1332 aa		27.52	■■■□□ 2
SERGEF-223	ENST00000533328	HOXB7	P09629	217 aa		27.52	■■■□□ 2
SERGEF-223	ENST00000533328	TBC1D9B	Q66K14	1250 aa		27.52	■■■□□ 2
SERGEF-223	ENST00000533328	SALL2	Q9Y467	1007 aa	Predicted RBP	27.51	■■□□□ 1.99
SERGEF-223	ENST00000533328	RGL2	O15211	777 aa		27.5	■■□□□ 1.99
SERGEF-223	ENST00000533328	MYL6B	P14649	208 aa		27.5	■■□□□ 1.99
SERGEF-223	ENST00000533328	DUSP27	Q5VZP5	1158 aa		27.5	■■□□□ 1.99
SERGEF-223	ENST00000533328	NUP98	P52948	1817 aa		27.49	■■□□□ 1.99
SERGEF-223	ENST00000533328	PROSER3	Q2NL68	480 aa		27.49	■■□□□ 1.99
SERGEF-223	ENST00000533328	CLEC4G	Q6UXB4	293 aa		27.49	■■□□□ 1.99
SERGEF-223	ENST00000533328	TTLL7	Q6ZT98	887 aa		27.49	■■□□□ 1.99
SERGEF-223	ENST00000533328	WDR63	Q8IWG1	891 aa		27.49	■■□□□ 1.99
SERGEF-223	ENST00000533328	MIER1	Q8N108	512 aa		27.49	■■□□□ 1.99
SERGEF-223	ENST00000533328	NGEF	Q8N5V2	710 aa		27.49	■■□□□ 1.99
SERGEF-223	ENST00000533328	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.48	■■□□□ 1.99
SERGEF-223	ENST00000533328	C8orf58	Q8NAV2	365 aa		27.48	■■□□□ 1.99
SERGEF-223	ENST00000533328	NECTIN2	Q92692	538 aa		27.48	■■□□□ 1.99
SERGEF-223	ENST00000533328	ANXA1	P04083	346 aa		27.47	■■□□□ 1.99
SERGEF-223	ENST00000533328	SERPINB2	P05120	415 aa		27.47	■■□□□ 1.99
SERGEF-223	ENST00000533328	TSR2	Q969E8	191 aa	Known RBP	27.47	■■□□□ 1.99
SERGEF-223	ENST00000533328	PXDNL	A1KZ92	1463 aa		27.46	■■□□□ 1.99

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