RNA–Protein interactions for RNA: ENST00000532931.5

ATM-219, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-219ENST00000532931 MIS18AQ9NYP9 233 aa16.19■□□□□ 0.18
ATM-219ENST00000532931 EIF4A1P60842 406 aaKnown RBP16.18■□□□□ 0.18
ATM-219ENST00000532931 FMNL2Q96PY5 1086 aa16.18■□□□□ 0.18
ATM-219ENST00000532931 TSPYL4Q9UJ04 414 aa16.18■□□□□ 0.18
ATM-219ENST00000532931 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
ATM-219ENST00000532931 PTCD1O75127 700 aaKnown RBP16.17■□□□□ 0.18
ATM-219ENST00000532931 ATXN8OSP0DMR3 200 aa16.17■□□□□ 0.18
ATM-219ENST00000532931 ITPK1Q13572 414 aa16.17■□□□□ 0.18
ATM-219ENST00000532931 SENP3-EIF4A1A0A087X0R7 540 aa16.16■□□□□ 0.18
ATM-219ENST00000532931 ATP6V1AP38606 617 aa16.16■□□□□ 0.18
ATM-219ENST00000532931 TEX13AQ9BXU3 409 aaPredicted RBP16.16■□□□□ 0.18
ATM-219ENST00000532931 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
ATM-219ENST00000532931 ZBTB12Q9Y330 459 aaPredicted RBP16.16■□□□□ 0.18
ATM-219ENST00000532931 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
ATM-219ENST00000532931 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
ATM-219ENST00000532931 GIGYF1O75420 1035 aaPredicted RBP16.14■□□□□ 0.17
ATM-219ENST00000532931 SNRPA1P09661 255 aaKnown RBP16.14■□□□□ 0.17
ATM-219ENST00000532931 KCNQ4P56696 695 aa16.14■□□□□ 0.17
ATM-219ENST00000532931 TRMT2AQ8IZ69 625 aaKnown RBP16.14■□□□□ 0.17
ATM-219ENST00000532931 LINC00116Q8NCU8 138 aa16.14■□□□□ 0.17
ATM-219ENST00000532931 AKT1S1Q96B36 256 aa16.14■□□□□ 0.17
ATM-219ENST00000532931 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
ATM-219ENST00000532931 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
ATM-219ENST00000532931 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
ATM-219ENST00000532931 CYP19A1P11511 503 aaPredicted RBP16.13■□□□□ 0.17
ATM-219ENST00000532931 GOLGA2Q08379 1002 aa16.13■□□□□ 0.17
ATM-219ENST00000532931 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
ATM-219ENST00000532931 COL24A1Q17RW2 1714 aa16.13■□□□□ 0.17
ATM-219ENST00000532931 SOS1Q07889 1333 aaPredicted RBP16.13■□□□□ 0.17
ATM-219ENST00000532931 HOXB7P09629 217 aa16.12■□□□□ 0.17
ATM-219ENST00000532931 HNRNPUQ00839 825 aaKnown RBP eCLIP16.12■□□□□ 0.17
ATM-219ENST00000532931 DNAJC10Q8IXB1 793 aa16.12■□□□□ 0.17
ATM-219ENST00000532931 ZBED9Q6R2W3 1325 aa16.12■□□□□ 0.17
ATM-219ENST00000532931 E9PSI1 815 aa16.11■□□□□ 0.17
ATM-219ENST00000532931 SLFN5Q08AF3 891 aa16.11■□□□□ 0.17
ATM-219ENST00000532931 NBPF14Q5TI25 921 aa16.11■□□□□ 0.17
ATM-219ENST00000532931 STARD3NLO95772 234 aa16.1■□□□□ 0.17
ATM-219ENST00000532931 SLC15A2Q16348 729 aa16.1■□□□□ 0.17
ATM-219ENST00000532931 INTS5Q6P9B9 1019 aaKnown RBP16.1■□□□□ 0.17
ATM-219ENST00000532931 MYH16Q9H6N6 1097 aa16.1■□□□□ 0.17
ATM-219ENST00000532931 ANO8Q9HCE9 1232 aaPredicted RBP16.1■□□□□ 0.17
ATM-219ENST00000532931 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
ATM-219ENST00000532931 FANCIQ9NVI1 1328 aa16.1■□□□□ 0.17
ATM-219ENST00000532931 PRAMEF22A3QJZ6 481 aa16.09■□□□□ 0.17
ATM-219ENST00000532931 YY1P25490 414 aa16.09■□□□□ 0.17
ATM-219ENST00000532931 CRKLP46109 303 aaKnown RBP16.09■□□□□ 0.17
ATM-219ENST00000532931 ZNF827Q17R98 1081 aa16.09■□□□□ 0.17
ATM-219ENST00000532931 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
ATM-219ENST00000532931 CCDC87Q9NVE4 849 aa16.08■□□□□ 0.16
ATM-219ENST00000532931 BCORQ6W2J9 1755 aa16.08■□□□□ 0.16
ATM-219ENST00000532931 RPS6KA4O75676 772 aa16.07■□□□□ 0.16
ATM-219ENST00000532931 KRT24Q2M2I5 525 aa16.07■□□□□ 0.16
ATM-219ENST00000532931 C8orf58Q8NAV2 365 aa16.07■□□□□ 0.16
ATM-219ENST00000532931 STK32BQ9NY57 414 aa16.07■□□□□ 0.16
ATM-219ENST00000532931 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
ATM-219ENST00000532931 SSFA2P28290 1259 aa16.06■□□□□ 0.16
ATM-219ENST00000532931 DUSP27Q5VZP5 1158 aa16.06■□□□□ 0.16
ATM-219ENST00000532931 CDCA7LQ96GN5 454 aa16.06■□□□□ 0.16
ATM-219ENST00000532931 PPP1R1BQ9UD71 204 aaPredicted RBP16.06■□□□□ 0.16
ATM-219ENST00000532931 NUP98P52948 1817 aa16.05■□□□□ 0.16
ATM-219ENST00000532931 TSPYL6Q8N831 410 aa16.05■□□□□ 0.16
ATM-219ENST00000532931 AK7Q96M32 723 aa16.05■□□□□ 0.16
ATM-219ENST00000532931 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
ATM-219ENST00000532931 SPON1Q9HCB6 807 aa16.05■□□□□ 0.16
ATM-219ENST00000532931 SCN7AQ01118 1682 aa16.05■□□□□ 0.16
ATM-219ENST00000532931 A1BGP04217 495 aa16.04■□□□□ 0.16
ATM-219ENST00000532931 IL6STP40189 918 aaPredicted RBP16.04■□□□□ 0.16
ATM-219ENST00000532931 EIF5P55010 431 aaKnown RBP16.04■□□□□ 0.16
ATM-219ENST00000532931 AMIGO3Q86WK7 504 aa16.04■□□□□ 0.16
ATM-219ENST00000532931 FLAD1Q8NFF5 587 aa16.04■□□□□ 0.16
ATM-219ENST00000532931 ZBTB1Q9Y2K1 713 aa16.04■□□□□ 0.16
ATM-219ENST00000532931 RTCBQ9Y3I0 505 aaKnown RBP16.04■□□□□ 0.16
ATM-219ENST00000532931 PNPLA7Q6ZV29 1317 aa16.03■□□□□ 0.16
ATM-219ENST00000532931 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
ATM-219ENST00000532931 GNPATO15228 680 aa16.03■□□□□ 0.16
ATM-219ENST00000532931 VAMP4O75379 141 aa16.03■□□□□ 0.16
ATM-219ENST00000532931 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
ATM-219ENST00000532931 PDIA6Q15084 440 aa16.03■□□□□ 0.16
ATM-219ENST00000532931 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
ATM-219ENST00000532931 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
ATM-219ENST00000532931 LRP10Q7Z4F1 713 aa16.03■□□□□ 0.16
ATM-219ENST00000532931 NBPF15Q8N660 670 aa16.03■□□□□ 0.16
ATM-219ENST00000532931 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
ATM-219ENST00000532931 ANKRD36CQ5JPF3 1778 aa16.01■□□□□ 0.15
ATM-219ENST00000532931 CT47B1P0C2W7 299 aaPredicted RBP16.01■□□□□ 0.15
ATM-219ENST00000532931 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
ATM-219ENST00000532931 COL15A1P39059 1388 aa16■□□□□ 0.15
ATM-219ENST00000532931 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
ATM-219ENST00000532931 TRAPPC3LQ5T215 181 aa16■□□□□ 0.15
ATM-219ENST00000532931 HDGFL1Q5TGJ6 251 aa16■□□□□ 0.15
ATM-219ENST00000532931 COL23A1Q86Y22 540 aaPredicted RBP16■□□□□ 0.15
ATM-219ENST00000532931 SLC16A10Q8TF71 515 aa16■□□□□ 0.15
ATM-219ENST00000532931 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
ATM-219ENST00000532931 ZNF428Q96B54 188 aa16■□□□□ 0.15
ATM-219ENST00000532931 DBF4Q9UBU7 674 aaPredicted RBP16■□□□□ 0.15
ATM-219ENST00000532931 ARFGEF2Q9Y6D5 1785 aa16■□□□□ 0.15
ATM-219ENST00000532931 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
ATM-219ENST00000532931 RGL2O15211 777 aa15.99■□□□□ 0.15
ATM-219ENST00000532931 EIF2S2P20042 333 aaKnown RBP15.99■□□□□ 0.15
ATM-219ENST00000532931 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms