RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 INTS5Q6P9B9 1019 aaKnown RBP15.49■□□□□ 0.07
TRAF3IP2-212ENST00000532708 TEX13AQ9BXU3 409 aaPredicted RBP15.49■□□□□ 0.07
TRAF3IP2-212ENST00000532708 PDGFDQ9GZP0 370 aaPredicted RBP15.49■□□□□ 0.07
TRAF3IP2-212ENST00000532708 PHF14O94880 888 aa15.49■□□□□ 0.07
TRAF3IP2-212ENST00000532708 A1BGP04217 495 aa15.49■□□□□ 0.07
TRAF3IP2-212ENST00000532708 ELL2O00472 640 aaPredicted RBP15.48■□□□□ 0.07
TRAF3IP2-212ENST00000532708 HMGB2P26583 209 aaKnown RBP15.48■□□□□ 0.07
TRAF3IP2-212ENST00000532708 PIP4K2AP48426 406 aaPredicted RBP15.48■□□□□ 0.07
TRAF3IP2-212ENST00000532708 RC3H1Q5TC82 1133 aaKnown RBP15.48■□□□□ 0.07
TRAF3IP2-212ENST00000532708 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
TRAF3IP2-212ENST00000532708 CNTNAP4Q9C0A0 1308 aa15.48■□□□□ 0.07
TRAF3IP2-212ENST00000532708 CANXP27824 592 aaKnown RBP15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 GOLGA2Q08379 1002 aa15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 C8orf58Q8NAV2 365 aa15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 CDCA7LQ96GN5 454 aa15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 CICQ96RK0 1608 aaPredicted RBP15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 ZBTB1Q9Y2K1 713 aa15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 TUBGCP6Q96RT7 1819 aa15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 PNPLA7Q6ZV29 1317 aa15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 FANCIQ9NVI1 1328 aa15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 EIF2S2P20042 333 aaKnown RBP15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 NECTIN2Q92692 538 aa15.47■□□□□ 0.07
TRAF3IP2-212ENST00000532708 DUSP27Q5VZP5 1158 aa15.46■□□□□ 0.07
TRAF3IP2-212ENST00000532708 RTCBQ9Y3I0 505 aaKnown RBP15.46■□□□□ 0.07
TRAF3IP2-212ENST00000532708 UBR3Q6ZT12 1888 aa15.46■□□□□ 0.06
TRAF3IP2-212ENST00000532708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.45■□□□□ 0.06
TRAF3IP2-212ENST00000532708 MSH5O43196 834 aa15.45■□□□□ 0.06
TRAF3IP2-212ENST00000532708 RPS6KA4O75676 772 aa15.45■□□□□ 0.06
TRAF3IP2-212ENST00000532708 COL23A1Q86Y22 540 aaPredicted RBP15.45■□□□□ 0.06
TRAF3IP2-212ENST00000532708 TSPYL6Q8N831 410 aa15.45■□□□□ 0.06
TRAF3IP2-212ENST00000532708 SRCAPQ6ZRS2 3230 aa15.45■□□□□ 0.06
TRAF3IP2-212ENST00000532708 MYH16Q9H6N6 1097 aa15.45■□□□□ 0.06
TRAF3IP2-212ENST00000532708 ZNF330Q9Y3S2 320 aaPredicted RBP15.45■□□□□ 0.06
TRAF3IP2-212ENST00000532708 EXOSC9Q06265 439 aaKnown RBP15.44■□□□□ 0.06
TRAF3IP2-212ENST00000532708 SLFN5Q08AF3 891 aa15.44■□□□□ 0.06
TRAF3IP2-212ENST00000532708 TRAPPC3LQ5T215 181 aa15.44■□□□□ 0.06
TRAF3IP2-212ENST00000532708 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
TRAF3IP2-212ENST00000532708 E9PSI1 815 aa15.43■□□□□ 0.06
TRAF3IP2-212ENST00000532708 SSFA2P28290 1259 aa15.43■□□□□ 0.06
TRAF3IP2-212ENST00000532708 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
TRAF3IP2-212ENST00000532708 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
TRAF3IP2-212ENST00000532708 ARHGEF1Q92888 912 aaKnown RBP15.43■□□□□ 0.06
TRAF3IP2-212ENST00000532708 LAMB4A4D0S4 1761 aa15.43■□□□□ 0.06
TRAF3IP2-212ENST00000532708 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
TRAF3IP2-212ENST00000532708 ANXA1P04083 346 aa15.42■□□□□ 0.06
TRAF3IP2-212ENST00000532708 MYL6BP14649 208 aa15.42■□□□□ 0.06
TRAF3IP2-212ENST00000532708 HDGFL1Q5TGJ6 251 aa15.42■□□□□ 0.06
TRAF3IP2-212ENST00000532708 FLAD1Q8NFF5 587 aa15.42■□□□□ 0.06
TRAF3IP2-212ENST00000532708 ARXQ96QS3 562 aa15.42■□□□□ 0.06
TRAF3IP2-212ENST00000532708 ZBTB7AO95365 584 aa15.41■□□□□ 0.06
TRAF3IP2-212ENST00000532708 EIF5P55010 431 aaKnown RBP15.41■□□□□ 0.06
TRAF3IP2-212ENST00000532708 TWISTNBQ3B726 338 aaPredicted RBP15.41■□□□□ 0.06
TRAF3IP2-212ENST00000532708 YTHDC1Q96MU7 727 aaKnown RBP15.41■□□□□ 0.06
TRAF3IP2-212ENST00000532708 QSER1Q2KHR3 1735 aa15.41■□□□□ 0.06
TRAF3IP2-212ENST00000532708 HOXB7P09629 217 aa15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 RFC4P35249 363 aa15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 IL6STP40189 918 aaPredicted RBP15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 PROSER3Q2NL68 480 aa15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 ZBED9Q6R2W3 1325 aa15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 TCERG1O14776 1098 aaKnown RBP15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 PDIA6Q15084 440 aa15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 SRP68Q9UHB9 627 aaKnown RBP15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 TBC1D2BQ9UPU7 963 aa15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 COL15A1P39059 1388 aa15.4■□□□□ 0.06
TRAF3IP2-212ENST00000532708 CASZ1Q86V15 1759 aa15.39■□□□□ 0.05
TRAF3IP2-212ENST00000532708 ADRA2BP18089 450 aa15.39■□□□□ 0.05
TRAF3IP2-212ENST00000532708 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
TRAF3IP2-212ENST00000532708 TRMT2AQ8IZ69 625 aaKnown RBP15.39■□□□□ 0.05
TRAF3IP2-212ENST00000532708 CHPF2Q9P2E5 772 aa15.39■□□□□ 0.05
TRAF3IP2-212ENST00000532708 ATF5Q9Y2D1 282 aaPredicted RBP15.39■□□□□ 0.05
TRAF3IP2-212ENST00000532708 VAMP4O75379 141 aa15.38■□□□□ 0.05
TRAF3IP2-212ENST00000532708 MSL1Q68DK7 614 aa15.38■□□□□ 0.05
TRAF3IP2-212ENST00000532708 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
TRAF3IP2-212ENST00000532708 ZPR1O75312 459 aa15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 USPL1Q5W0Q7 1092 aa15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 LRP10Q7Z4F1 713 aa15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 DZIP3Q86Y13 1208 aaKnown RBP15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 DDX21Q9NR30 783 aaKnown RBP eCLIP15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 DBF4Q9UBU7 674 aaPredicted RBP15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 ERBB4Q15303 1308 aa15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 CCDC30Q5VVM6 783 aa15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 TTLL7Q6ZT98 887 aa15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 SLC16A10Q8TF71 515 aa15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 NARFQ9UHQ1 456 aa15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 USP42Q9H9J4 1324 aaKnown RBP15.36■□□□□ 0.05
TRAF3IP2-212ENST00000532708 A0A087WZG4 1122 aa15.35■□□□□ 0.05
TRAF3IP2-212ENST00000532708 GYS1P13807 737 aa15.35■□□□□ 0.05
TRAF3IP2-212ENST00000532708 AIMP1Q12904 312 aaKnown RBP15.35■□□□□ 0.05
TRAF3IP2-212ENST00000532708 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
TRAF3IP2-212ENST00000532708 FKBP8Q14318 412 aa15.34■□□□□ 0.05
TRAF3IP2-212ENST00000532708 COPS6Q7L5N1 327 aa15.34■□□□□ 0.05
TRAF3IP2-212ENST00000532708 XAGE3Q8WTP9 111 aa15.34■□□□□ 0.05
TRAF3IP2-212ENST00000532708 PHAXQ9H814 394 aaKnown RBP15.33■□□□□ 0.05
TRAF3IP2-212ENST00000532708 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.05
TRAF3IP2-212ENST00000532708 CAMTA2O94983 1202 aa15.33■□□□□ 0.04
TRAF3IP2-212ENST00000532708 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
TRAF3IP2-212ENST00000532708 STK31Q9BXU1 1019 aa15.33■□□□□ 0.04
TRAF3IP2-212ENST00000532708 SPON1Q9HCB6 807 aa15.33■□□□□ 0.04
TRAF3IP2-212ENST00000532708 HYPKQ9NX55 129 aa15.33■□□□□ 0.04
TRAF3IP2-212ENST00000532708 CHMP4AQ9BY43 222 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms