RNA–Protein interactions for RNA: ENST00000531933.1

ATG13-218, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-218ENST00000531933 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
ATG13-218ENST00000531933 GNAI1P63096 354 aa12.98□□□□□ -0.33
ATG13-218ENST00000531933 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
ATG13-218ENST00000531933 MIER1Q8N108 512 aa12.98□□□□□ -0.33
ATG13-218ENST00000531933 POLD1P28340 1107 aa12.97□□□□□ -0.33
ATG13-218ENST00000531933 RFC4P35249 363 aa12.97□□□□□ -0.33
ATG13-218ENST00000531933 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
ATG13-218ENST00000531933 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
ATG13-218ENST00000531933 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
ATG13-218ENST00000531933 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
ATG13-218ENST00000531933 PPP1R1BQ9UD71 204 aaPredicted RBP12.97□□□□□ -0.33
ATG13-218ENST00000531933 MYH14Q7Z406 1995 aaKnown RBP12.96□□□□□ -0.33
ATG13-218ENST00000531933 CHL1O00533 1208 aa12.96□□□□□ -0.33
ATG13-218ENST00000531933 CANXP27824 592 aaKnown RBP12.96□□□□□ -0.33
ATG13-218ENST00000531933 PDGFDQ9GZP0 370 aaPredicted RBP12.96□□□□□ -0.33
ATG13-218ENST00000531933 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
ATG13-218ENST00000531933 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
ATG13-218ENST00000531933 A0A087WZG4 1122 aa12.95□□□□□ -0.34
ATG13-218ENST00000531933 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
ATG13-218ENST00000531933 INTS5Q6P9B9 1019 aaKnown RBP12.95□□□□□ -0.34
ATG13-218ENST00000531933 WWC1Q8IX03 1113 aa12.95□□□□□ -0.34
ATG13-218ENST00000531933 ZBTB1Q9Y2K1 713 aa12.95□□□□□ -0.34
ATG13-218ENST00000531933 ZNF330Q9Y3S2 320 aaPredicted RBP12.95□□□□□ -0.34
ATG13-218ENST00000531933 C4AP0C0L4 1744 aa12.95□□□□□ -0.34
ATG13-218ENST00000531933 COL15A1P39059 1388 aa12.94□□□□□ -0.34
ATG13-218ENST00000531933 SOS1Q07889 1333 aaPredicted RBP12.94□□□□□ -0.34
ATG13-218ENST00000531933 ZPR1O75312 459 aa12.94□□□□□ -0.34
ATG13-218ENST00000531933 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
ATG13-218ENST00000531933 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
ATG13-218ENST00000531933 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
ATG13-218ENST00000531933 IL16Q14005 1332 aa12.93□□□□□ -0.34
ATG13-218ENST00000531933 IL6STP40189 918 aaPredicted RBP12.93□□□□□ -0.34
ATG13-218ENST00000531933 WDR63Q8IWG1 891 aa12.93□□□□□ -0.34
ATG13-218ENST00000531933 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
ATG13-218ENST00000531933 MBIPQ9NS73 344 aa12.93□□□□□ -0.34
ATG13-218ENST00000531933 ERBB4Q15303 1308 aa12.92□□□□□ -0.34
ATG13-218ENST00000531933 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
ATG13-218ENST00000531933 A1BGP04217 495 aa12.92□□□□□ -0.34
ATG13-218ENST00000531933 HOXB7P09629 217 aa12.92□□□□□ -0.34
ATG13-218ENST00000531933 MSL1Q68DK7 614 aa12.92□□□□□ -0.34
ATG13-218ENST00000531933 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
ATG13-218ENST00000531933 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
ATG13-218ENST00000531933 NLGN1Q8N2Q7 840 aa12.92□□□□□ -0.34
ATG13-218ENST00000531933 ARXQ96QS3 562 aa12.92□□□□□ -0.34
ATG13-218ENST00000531933 USP42Q9H9J4 1324 aaKnown RBP12.91□□□□□ -0.34
ATG13-218ENST00000531933 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
ATG13-218ENST00000531933 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
ATG13-218ENST00000531933 EIF5P55010 431 aaKnown RBP12.91□□□□□ -0.34
ATG13-218ENST00000531933 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
ATG13-218ENST00000531933 MYH16Q9H6N6 1097 aa12.9□□□□□ -0.34
ATG13-218ENST00000531933 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
ATG13-218ENST00000531933 PTGER2P43116 358 aa12.89□□□□□ -0.35
ATG13-218ENST00000531933 HDGFL1Q5TGJ6 251 aa12.89□□□□□ -0.35
ATG13-218ENST00000531933 DUSP27Q5VZP5 1158 aa12.89□□□□□ -0.35
ATG13-218ENST00000531933 USPL1Q5W0Q7 1092 aa12.89□□□□□ -0.35
ATG13-218ENST00000531933 DZIP3Q86Y13 1208 aaKnown RBP12.89□□□□□ -0.35
ATG13-218ENST00000531933 SCN7AQ01118 1682 aa12.89□□□□□ -0.35
ATG13-218ENST00000531933 GYS1P13807 737 aa12.88□□□□□ -0.35
ATG13-218ENST00000531933 MYL6BP14649 208 aa12.88□□□□□ -0.35
ATG13-218ENST00000531933 PIP4K2AP48426 406 aaPredicted RBP12.88□□□□□ -0.35
ATG13-218ENST00000531933 KIF6Q6ZMV9 814 aa12.88□□□□□ -0.35
ATG13-218ENST00000531933 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
ATG13-218ENST00000531933 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
ATG13-218ENST00000531933 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
ATG13-218ENST00000531933 ZNF652Q9Y2D9 606 aa12.88□□□□□ -0.35
ATG13-218ENST00000531933 BCORQ6W2J9 1755 aa12.87□□□□□ -0.35
ATG13-218ENST00000531933 MMP10P09238 476 aa12.87□□□□□ -0.35
ATG13-218ENST00000531933 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
ATG13-218ENST00000531933 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
ATG13-218ENST00000531933 SGIP1Q9BQI5 828 aa12.87□□□□□ -0.35
ATG13-218ENST00000531933 TBC1D2BQ9UPU7 963 aa12.87□□□□□ -0.35
ATG13-218ENST00000531933 PARP3Q9Y6F1 533 aa12.87□□□□□ -0.35
ATG13-218ENST00000531933 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
ATG13-218ENST00000531933 NBPF26B4DH59 902 aa12.86□□□□□ -0.35
ATG13-218ENST00000531933 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
ATG13-218ENST00000531933 KRT24Q2M2I5 525 aa12.86□□□□□ -0.35
ATG13-218ENST00000531933 NBPF10Q6P3W6 841 aaKnown RBP12.86□□□□□ -0.35
ATG13-218ENST00000531933 NBPF15Q8N660 670 aa12.86□□□□□ -0.35
ATG13-218ENST00000531933 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
ATG13-218ENST00000531933 FKBP8Q14318 412 aa12.85□□□□□ -0.35
ATG13-218ENST00000531933 CCDC30Q5VVM6 783 aa12.85□□□□□ -0.35
ATG13-218ENST00000531933 DDX21Q9NR30 783 aaKnown RBP eCLIP12.85□□□□□ -0.35
ATG13-218ENST00000531933 E9PSI1 815 aa12.84□□□□□ -0.35
ATG13-218ENST00000531933 RGL2O15211 777 aa12.84□□□□□ -0.35
ATG13-218ENST00000531933 TWISTNBQ3B726 338 aaPredicted RBP12.84□□□□□ -0.35
ATG13-218ENST00000531933 C8orf58Q8NAV2 365 aa12.84□□□□□ -0.35
ATG13-218ENST00000531933 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
ATG13-218ENST00000531933 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
ATG13-218ENST00000531933 ZNF521Q96K83 1311 aa12.84□□□□□ -0.35
ATG13-218ENST00000531933 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
ATG13-218ENST00000531933 NPHP1O15259 732 aa12.83□□□□□ -0.36
ATG13-218ENST00000531933 CAMTA2O94983 1202 aa12.83□□□□□ -0.36
ATG13-218ENST00000531933 HNRNPUQ00839 825 aaKnown RBP eCLIP12.83□□□□□ -0.36
ATG13-218ENST00000531933 CLEC4GQ6UXB4 293 aa12.83□□□□□ -0.36
ATG13-218ENST00000531933 FHDC1Q9C0D6 1143 aaPredicted RBP12.83□□□□□ -0.36
ATG13-218ENST00000531933 CHPF2Q9P2E5 772 aa12.83□□□□□ -0.36
ATG13-218ENST00000531933 MAP3K15Q6ZN16 1313 aa12.83□□□□□ -0.36
ATG13-218ENST00000531933 ERVV-1B6SEH8 477 aa12.82□□□□□ -0.36
ATG13-218ENST00000531933 EXOSC9Q06265 439 aaKnown RBP12.82□□□□□ -0.36
ATG13-218ENST00000531933 BICDL1Q6ZP65 573 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms