RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
LINC01016-204ENST00000531046 SYT17Q9BSW7 474 aa17.11■□□□□ 0.33
LINC01016-204ENST00000531046 ADRA2BP18089 450 aa17.1■□□□□ 0.33
LINC01016-204ENST00000531046 RUNDC1Q96C34 613 aa17.1■□□□□ 0.33
LINC01016-204ENST00000531046 ZBTB1Q9Y2K1 713 aa17.1■□□□□ 0.33
LINC01016-204ENST00000531046 STARD3NLO95772 234 aa17.09■□□□□ 0.33
LINC01016-204ENST00000531046 CANXP27824 592 aaKnown RBP17.09■□□□□ 0.33
LINC01016-204ENST00000531046 SRP68Q9UHB9 627 aaKnown RBP17.09■□□□□ 0.33
LINC01016-204ENST00000531046 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
LINC01016-204ENST00000531046 C4AP0C0L4 1744 aa17.07■□□□□ 0.32
LINC01016-204ENST00000531046 SOS1Q07889 1333 aaPredicted RBP17.07■□□□□ 0.32
LINC01016-204ENST00000531046 GYS1P13807 737 aa17.07■□□□□ 0.32
LINC01016-204ENST00000531046 TEX13AQ9BXU3 409 aaPredicted RBP17.07■□□□□ 0.32
LINC01016-204ENST00000531046 A1BGP04217 495 aa17.06■□□□□ 0.32
LINC01016-204ENST00000531046 MMP10P09238 476 aa17.06■□□□□ 0.32
LINC01016-204ENST00000531046 USP16Q9Y5T5 823 aa17.06■□□□□ 0.32
LINC01016-204ENST00000531046 COL15A1P39059 1388 aa17.05■□□□□ 0.32
LINC01016-204ENST00000531046 USP42Q9H9J4 1324 aaKnown RBP17.05■□□□□ 0.32
LINC01016-204ENST00000531046 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
LINC01016-204ENST00000531046 LMOD3Q0VAK6 560 aa17.05■□□□□ 0.32
LINC01016-204ENST00000531046 NLGN1Q8N2Q7 840 aa17.05■□□□□ 0.32
LINC01016-204ENST00000531046 NLGN2Q8NFZ4 835 aa17.05■□□□□ 0.32
LINC01016-204ENST00000531046 PNISRQ8TF01 805 aaKnown RBP17.05■□□□□ 0.32
LINC01016-204ENST00000531046 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
LINC01016-204ENST00000531046 ZPR1O75312 459 aa17.04■□□□□ 0.32
LINC01016-204ENST00000531046 PIP4K2AP48426 406 aaPredicted RBP17.04■□□□□ 0.32
LINC01016-204ENST00000531046 FKBP8Q14318 412 aa17.04■□□□□ 0.32
LINC01016-204ENST00000531046 USPL1Q5W0Q7 1092 aa17.04■□□□□ 0.32
LINC01016-204ENST00000531046 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
LINC01016-204ENST00000531046 APAF1O14727 1248 aa17.03■□□□□ 0.32
LINC01016-204ENST00000531046 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
LINC01016-204ENST00000531046 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
LINC01016-204ENST00000531046 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.32
LINC01016-204ENST00000531046 SENP3-EIF4A1A0A087X0R7 540 aa17.02■□□□□ 0.32
LINC01016-204ENST00000531046 DCAF8L1A6NGE4 600 aa17.02■□□□□ 0.32
LINC01016-204ENST00000531046 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.32
LINC01016-204ENST00000531046 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
LINC01016-204ENST00000531046 NARFQ9UHQ1 456 aa17.01■□□□□ 0.31
LINC01016-204ENST00000531046 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
LINC01016-204ENST00000531046 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
LINC01016-204ENST00000531046 PELP1Q8IZL8 1130 aaKnown RBP17■□□□□ 0.31
LINC01016-204ENST00000531046 TBC1D2BQ9UPU7 963 aa17■□□□□ 0.31
LINC01016-204ENST00000531046 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
LINC01016-204ENST00000531046 NPM2Q86SE8 214 aaKnown RBP16.99■□□□□ 0.31
LINC01016-204ENST00000531046 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
LINC01016-204ENST00000531046 CD2APQ9Y5K6 639 aa16.99■□□□□ 0.31
LINC01016-204ENST00000531046 PARP3Q9Y6F1 533 aa16.99■□□□□ 0.31
LINC01016-204ENST00000531046 A0A087WZG4 1122 aa16.98■□□□□ 0.31
LINC01016-204ENST00000531046 DDR1Q08345 913 aa16.98■□□□□ 0.31
LINC01016-204ENST00000531046 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
LINC01016-204ENST00000531046 TM4SF1P30408 202 aa16.97■□□□□ 0.31
LINC01016-204ENST00000531046 GPR162Q16538 588 aa16.97■□□□□ 0.31
LINC01016-204ENST00000531046 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
LINC01016-204ENST00000531046 NBPF15Q8N660 670 aa16.97■□□□□ 0.31
LINC01016-204ENST00000531046 WWC3Q9ULE0 1092 aa16.97■□□□□ 0.31
LINC01016-204ENST00000531046 NFIXQ14938 502 aa16.96■□□□□ 0.31
LINC01016-204ENST00000531046 BICDL1Q6ZP65 573 aa16.96■□□□□ 0.31
LINC01016-204ENST00000531046 DZIP3Q86Y13 1208 aaKnown RBP16.96■□□□□ 0.31
LINC01016-204ENST00000531046 LAMB4A4D0S4 1761 aa16.95■□□□□ 0.3
LINC01016-204ENST00000531046 POLRMTO00411 1230 aaKnown RBP16.95■□□□□ 0.3
LINC01016-204ENST00000531046 CHL1O00533 1208 aa16.95■□□□□ 0.3
LINC01016-204ENST00000531046 NGEFQ8N5V2 710 aa16.95■□□□□ 0.3
LINC01016-204ENST00000531046 BABAM1Q9NWV8 329 aa16.95■□□□□ 0.3
LINC01016-204ENST00000531046 CAMTA2O94983 1202 aa16.94■□□□□ 0.3
LINC01016-204ENST00000531046 KRT24Q2M2I5 525 aa16.94■□□□□ 0.3
LINC01016-204ENST00000531046 MYL6BP14649 208 aa16.93■□□□□ 0.3
LINC01016-204ENST00000531046 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
LINC01016-204ENST00000531046 TBC1D9BQ66K14 1250 aa16.93■□□□□ 0.3
LINC01016-204ENST00000531046 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
LINC01016-204ENST00000531046 NECTIN2Q92692 538 aa16.93■□□□□ 0.3
LINC01016-204ENST00000531046 C10orf71Q711Q0 1435 aa16.93■□□□□ 0.3
LINC01016-204ENST00000531046 SCN7AQ01118 1682 aa16.92■□□□□ 0.3
LINC01016-204ENST00000531046 A0A0G2JLW4 131 aa16.92■□□□□ 0.3
LINC01016-204ENST00000531046 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC01016-204ENST00000531046 CFAP44Q96MT7 982 aa16.92■□□□□ 0.3
LINC01016-204ENST00000531046 SERPINB2P05120 415 aa16.91■□□□□ 0.3
LINC01016-204ENST00000531046 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
LINC01016-204ENST00000531046 PXDNLA1KZ92 1463 aa16.91■□□□□ 0.3
LINC01016-204ENST00000531046 KIF13BQ9NQT8 1826 aa16.91■□□□□ 0.3
LINC01016-204ENST00000531046 N4BP2Q86UW6 1770 aaPredicted RBP16.9■□□□□ 0.3
LINC01016-204ENST00000531046 MBIPQ9NS73 344 aa16.9■□□□□ 0.3
LINC01016-204ENST00000531046 AFDNP55196 1824 aaKnown RBP16.9■□□□□ 0.3
LINC01016-204ENST00000531046 BCORQ6W2J9 1755 aa16.89■□□□□ 0.3
LINC01016-204ENST00000531046 ANXA1P04083 346 aa16.89■□□□□ 0.29
LINC01016-204ENST00000531046 ZNF853P0CG23 659 aa16.89■□□□□ 0.29
LINC01016-204ENST00000531046 DPEP1P16444 411 aa16.89■□□□□ 0.29
LINC01016-204ENST00000531046 TGFB2P61812 414 aa16.89■□□□□ 0.29
LINC01016-204ENST00000531046 KIAA1551Q9HCM1 1747 aa16.88■□□□□ 0.29
LINC01016-204ENST00000531046 GNAI1P63096 354 aa16.88■□□□□ 0.29
LINC01016-204ENST00000531046 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
LINC01016-204ENST00000531046 PROSER3Q2NL68 480 aa16.88■□□□□ 0.29
LINC01016-204ENST00000531046 TTLL7Q6ZT98 887 aa16.88■□□□□ 0.29
LINC01016-204ENST00000531046 CCDC24Q8N4L8 307 aa16.88■□□□□ 0.29
LINC01016-204ENST00000531046 IFT57Q9NWB7 429 aa16.88■□□□□ 0.29
LINC01016-204ENST00000531046 YY1P25490 414 aa16.87■□□□□ 0.29
LINC01016-204ENST00000531046 CHRNA5P30532 468 aa16.87■□□□□ 0.29
LINC01016-204ENST00000531046 PDIA6Q15084 440 aa16.87■□□□□ 0.29
LINC01016-204ENST00000531046 HLFQ16534 295 aa16.87■□□□□ 0.29
LINC01016-204ENST00000531046 WWC1Q8IX03 1113 aa16.87■□□□□ 0.29
LINC01016-204ENST00000531046 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms