RNA–Protein interactions for RNA: ENST00000531018.5

SYVN1-213, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-213ENST00000531018 RTCBQ9Y3I0 505 aaKnown RBP12.14□□□□□ -0.47
SYVN1-213ENST00000531018 LMOD3Q0VAK6 560 aa12.13□□□□□ -0.47
SYVN1-213ENST00000531018 TRAPPC3LQ5T215 181 aa12.13□□□□□ -0.47
SYVN1-213ENST00000531018 CCDC87Q9NVE4 849 aa12.13□□□□□ -0.47
SYVN1-213ENST00000531018 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
SYVN1-213ENST00000531018 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
SYVN1-213ENST00000531018 MSH5O43196 834 aa12.12□□□□□ -0.47
SYVN1-213ENST00000531018 NCBP3Q53F19 620 aaKnown RBP12.12□□□□□ -0.47
SYVN1-213ENST00000531018 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
SYVN1-213ENST00000531018 ZNF784Q8NCA9 323 aaPredicted RBP12.12□□□□□ -0.47
SYVN1-213ENST00000531018 MRS2Q9HD23 443 aa12.12□□□□□ -0.47
SYVN1-213ENST00000531018 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
SYVN1-213ENST00000531018 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
SYVN1-213ENST00000531018 CHL1O00533 1208 aa12.11□□□□□ -0.47
SYVN1-213ENST00000531018 APAF1O14727 1248 aa12.11□□□□□ -0.47
SYVN1-213ENST00000531018 PHF14O94880 888 aa12.11□□□□□ -0.47
SYVN1-213ENST00000531018 STARD3NLO95772 234 aa12.11□□□□□ -0.47
SYVN1-213ENST00000531018 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
SYVN1-213ENST00000531018 POLD1P28340 1107 aa12.11□□□□□ -0.47
SYVN1-213ENST00000531018 EIF5P55010 431 aaKnown RBP12.11□□□□□ -0.47
SYVN1-213ENST00000531018 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
SYVN1-213ENST00000531018 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
SYVN1-213ENST00000531018 USP16Q9Y5T5 823 aa12.11□□□□□ -0.47
SYVN1-213ENST00000531018 KIF13BQ9NQT8 1826 aa12.1□□□□□ -0.47
SYVN1-213ENST00000531018 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
SYVN1-213ENST00000531018 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
SYVN1-213ENST00000531018 GYS1P13807 737 aa12.1□□□□□ -0.47
SYVN1-213ENST00000531018 GPR162Q16538 588 aa12.1□□□□□ -0.47
SYVN1-213ENST00000531018 MSL1Q68DK7 614 aa12.1□□□□□ -0.47
SYVN1-213ENST00000531018 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
SYVN1-213ENST00000531018 ZNF853P0CG23 659 aa12.09□□□□□ -0.47
SYVN1-213ENST00000531018 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
SYVN1-213ENST00000531018 NEUROD2Q15784 382 aa12.09□□□□□ -0.47
SYVN1-213ENST00000531018 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
SYVN1-213ENST00000531018 NLGN2Q8NFZ4 835 aa12.09□□□□□ -0.47
SYVN1-213ENST00000531018 COL15A1P39059 1388 aa12.08□□□□□ -0.48
SYVN1-213ENST00000531018 A1BGP04217 495 aa12.08□□□□□ -0.48
SYVN1-213ENST00000531018 RFC4P35249 363 aa12.08□□□□□ -0.48
SYVN1-213ENST00000531018 NLGN1Q8N2Q7 840 aa12.08□□□□□ -0.48
SYVN1-213ENST00000531018 NARFQ9UHQ1 456 aa12.08□□□□□ -0.48
SYVN1-213ENST00000531018 SCN7AQ01118 1682 aa12.07□□□□□ -0.48
SYVN1-213ENST00000531018 NBPF26B4DH59 902 aa12.07□□□□□ -0.48
SYVN1-213ENST00000531018 NBPF10Q6P3W6 841 aaKnown RBP12.07□□□□□ -0.48
SYVN1-213ENST00000531018 NBPF15Q8N660 670 aa12.07□□□□□ -0.48
SYVN1-213ENST00000531018 CFAP44Q96MT7 982 aa12.07□□□□□ -0.48
SYVN1-213ENST00000531018 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
SYVN1-213ENST00000531018 BCORQ6W2J9 1755 aa12.07□□□□□ -0.48
SYVN1-213ENST00000531018 NRXN2Q9P2S2 1712 aa12.06□□□□□ -0.48
SYVN1-213ENST00000531018 CHD4Q14839 1912 aa12.06□□□□□ -0.48
SYVN1-213ENST00000531018 CANXP27824 592 aaKnown RBP12.06□□□□□ -0.48
SYVN1-213ENST00000531018 TM4SF1P30408 202 aa12.06□□□□□ -0.48
SYVN1-213ENST00000531018 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
SYVN1-213ENST00000531018 TSPYL4Q9UJ04 414 aa12.06□□□□□ -0.48
SYVN1-213ENST00000531018 KIAA1551Q9HCM1 1747 aa12.06□□□□□ -0.48
SYVN1-213ENST00000531018 AFDNP55196 1824 aaKnown RBP12.05□□□□□ -0.48
SYVN1-213ENST00000531018 FKBP8Q14318 412 aa12.05□□□□□ -0.48
SYVN1-213ENST00000531018 IFT57Q9NWB7 429 aa12.05□□□□□ -0.48
SYVN1-213ENST00000531018 A0A087WZG4 1122 aa12.04□□□□□ -0.48
SYVN1-213ENST00000531018 CCER2I3L3R5 266 aa12.04□□□□□ -0.48
SYVN1-213ENST00000531018 RGL2O15211 777 aa12.04□□□□□ -0.48
SYVN1-213ENST00000531018 MMP10P09238 476 aa12.04□□□□□ -0.48
SYVN1-213ENST00000531018 USPL1Q5W0Q7 1092 aa12.04□□□□□ -0.48
SYVN1-213ENST00000531018 LRP10Q7Z4F1 713 aa12.04□□□□□ -0.48
SYVN1-213ENST00000531018 WWC1Q8IX03 1113 aa12.04□□□□□ -0.48
SYVN1-213ENST00000531018 CD2APQ9Y5K6 639 aa12.04□□□□□ -0.48
SYVN1-213ENST00000531018 ERBB4Q15303 1308 aa12.04□□□□□ -0.48
SYVN1-213ENST00000531018 ZPR1O75312 459 aa12.03□□□□□ -0.48
SYVN1-213ENST00000531018 CALD1Q05682 793 aaKnown RBP12.03□□□□□ -0.48
SYVN1-213ENST00000531018 DDR1Q08345 913 aa12.03□□□□□ -0.48
SYVN1-213ENST00000531018 PDIA6Q15084 440 aa12.03□□□□□ -0.48
SYVN1-213ENST00000531018 NUP98P52948 1817 aa12.02□□□□□ -0.48
SYVN1-213ENST00000531018 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
SYVN1-213ENST00000531018 CAMTA2O94983 1202 aa12.02□□□□□ -0.49
SYVN1-213ENST00000531018 HOXB7P09629 217 aa12.02□□□□□ -0.49
SYVN1-213ENST00000531018 YBX3P16989 372 aaKnown RBP eCLIP12.02□□□□□ -0.49
SYVN1-213ENST00000531018 GNAI1P63096 354 aa12.02□□□□□ -0.49
SYVN1-213ENST00000531018 NGEFQ8N5V2 710 aa12.02□□□□□ -0.49
SYVN1-213ENST00000531018 MBIPQ9NS73 344 aa12.02□□□□□ -0.49
SYVN1-213ENST00000531018 IL16Q14005 1332 aa12.02□□□□□ -0.49
SYVN1-213ENST00000531018 C10orf71Q711Q0 1435 aa12.02□□□□□ -0.49
SYVN1-213ENST00000531018 BRCA1P38398 1863 aaKnown RBP12.02□□□□□ -0.49
SYVN1-213ENST00000531018 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
SYVN1-213ENST00000531018 PIP4K2AP48426 406 aaPredicted RBP12.01□□□□□ -0.49
SYVN1-213ENST00000531018 NFIXQ14938 502 aa12.01□□□□□ -0.49
SYVN1-213ENST00000531018 KRT24Q2M2I5 525 aa12.01□□□□□ -0.49
SYVN1-213ENST00000531018 TBC1D2BQ9UPU7 963 aa12.01□□□□□ -0.49
SYVN1-213ENST00000531018 CLEC4GQ6UXB4 293 aa12□□□□□ -0.49
SYVN1-213ENST00000531018 WDR63Q8IWG1 891 aa12□□□□□ -0.49
SYVN1-213ENST00000531018 FAM9BQ8IZU0 186 aa12□□□□□ -0.49
SYVN1-213ENST00000531018 WWC3Q9ULE0 1092 aa12□□□□□ -0.49
SYVN1-213ENST00000531018 ZNF521Q96K83 1311 aa12□□□□□ -0.49
SYVN1-213ENST00000531018 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
SYVN1-213ENST00000531018 DIEXFQ68CQ4 756 aaKnown RBP11.99□□□□□ -0.49
SYVN1-213ENST00000531018 DZIP3Q86Y13 1208 aaKnown RBP11.99□□□□□ -0.49
SYVN1-213ENST00000531018 LAS1LQ9Y4W2 734 aaKnown RBP11.99□□□□□ -0.49
SYVN1-213ENST00000531018 N4BP2Q86UW6 1770 aaPredicted RBP11.99□□□□□ -0.49
SYVN1-213ENST00000531018 CACNA1FO60840 1977 aa11.98□□□□□ -0.49
SYVN1-213ENST00000531018 ANKRD31Q8N7Z5 1873 aa11.98□□□□□ -0.49
SYVN1-213ENST00000531018 PXDNLA1KZ92 1463 aa11.98□□□□□ -0.49
SYVN1-213ENST00000531018 ERVV-1B6SEH8 477 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms