RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
CCS-206ENST00000530961 LAS1LQ9Y4W2 734 aaKnown RBP19.93■□□□□ 0.78
CCS-206ENST00000530961 ZNF853P0CG23 659 aa19.92■□□□□ 0.78
CCS-206ENST00000530961 IL16Q14005 1332 aa19.92■□□□□ 0.78
CCS-206ENST00000530961 CNTNAP4Q9C0A0 1308 aa19.92■□□□□ 0.78
CCS-206ENST00000530961 CYP19A1P11511 503 aaPredicted RBP19.91■□□□□ 0.78
CCS-206ENST00000530961 APLP1P51693 650 aa19.91■□□□□ 0.78
CCS-206ENST00000530961 FLAD1Q8NFF5 587 aa19.91■□□□□ 0.78
CCS-206ENST00000530961 SCN11AQ9UI33 1791 aa19.9■□□□□ 0.78
CCS-206ENST00000530961 GRIN3BO60391 1043 aa19.9■□□□□ 0.78
CCS-206ENST00000530961 CRKLP46109 303 aaKnown RBP19.89■□□□□ 0.77
CCS-206ENST00000530961 KCPQ6ZWJ8 1503 aa19.89■□□□□ 0.77
CCS-206ENST00000530961 GNPATO15228 680 aa19.88■□□□□ 0.77
CCS-206ENST00000530961 RPS6KA4O75676 772 aa19.88■□□□□ 0.77
CCS-206ENST00000530961 SSFA2P28290 1259 aa19.88■□□□□ 0.77
CCS-206ENST00000530961 KLHL34Q8N239 644 aa19.88■□□□□ 0.77
CCS-206ENST00000530961 MBIPQ9NS73 344 aa19.88■□□□□ 0.77
CCS-206ENST00000530961 CCDC87Q9NVE4 849 aa19.88■□□□□ 0.77
CCS-206ENST00000530961 RTCBQ9Y3I0 505 aaKnown RBP19.88■□□□□ 0.77
CCS-206ENST00000530961 INTS5Q6P9B9 1019 aaKnown RBP19.87■□□□□ 0.77
CCS-206ENST00000530961 ITGB4P16144 1822 aa19.87■□□□□ 0.77
CCS-206ENST00000530961 ADRA2BP18089 450 aa19.86■□□□□ 0.77
CCS-206ENST00000530961 USP16Q9Y5T5 823 aa19.86■□□□□ 0.77
CCS-206ENST00000530961 PNPLA7Q6ZV29 1317 aa19.85■□□□□ 0.77
CCS-206ENST00000530961 ZNF521Q96K83 1311 aa19.85■□□□□ 0.77
CCS-206ENST00000530961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.85■□□□□ 0.77
CCS-206ENST00000530961 TRAPPC3LQ5T215 181 aa19.85■□□□□ 0.77
CCS-206ENST00000530961 GOLGB1Q14789 3259 aaKnown RBP19.85■□□□□ 0.77
CCS-206ENST00000530961 KAT6BQ8WYB5 2073 aa19.84■□□□□ 0.77
CCS-206ENST00000530961 PRAMEF22A3QJZ6 481 aa19.84■□□□□ 0.77
CCS-206ENST00000530961 HOXB7P09629 217 aa19.84■□□□□ 0.77
CCS-206ENST00000530961 SLC16A10Q8TF71 515 aa19.84■□□□□ 0.77
CCS-206ENST00000530961 LY75O60449 1722 aa19.84■□□□□ 0.77
CCS-206ENST00000530961 COL23A1Q86Y22 540 aaPredicted RBP19.83■□□□□ 0.77
CCS-206ENST00000530961 DNAJC5GQ8N7S2 189 aa19.83■□□□□ 0.77
CCS-206ENST00000530961 MYH16Q9H6N6 1097 aa19.83■□□□□ 0.77
CCS-206ENST00000530961 PAPPAQ13219 1627 aa19.83■□□□□ 0.76
CCS-206ENST00000530961 PHF14O94880 888 aa19.82■□□□□ 0.76
CCS-206ENST00000530961 GOLGA2Q08379 1002 aa19.82■□□□□ 0.76
CCS-206ENST00000530961 AMIGO3Q86WK7 504 aa19.82■□□□□ 0.76
CCS-206ENST00000530961 CHMP4AQ9BY43 222 aa19.82■□□□□ 0.76
CCS-206ENST00000530961 ZBTB1Q9Y2K1 713 aa19.82■□□□□ 0.76
CCS-206ENST00000530961 MSH5O43196 834 aa19.81■□□□□ 0.76
CCS-206ENST00000530961 A1BGP04217 495 aa19.81■□□□□ 0.76
CCS-206ENST00000530961 CANXP27824 592 aaKnown RBP19.81■□□□□ 0.76
CCS-206ENST00000530961 IL6STP40189 918 aaPredicted RBP19.81■□□□□ 0.76
CCS-206ENST00000530961 NPM2Q86SE8 214 aaKnown RBP19.81■□□□□ 0.76
CCS-206ENST00000530961 SOS1Q07889 1333 aaPredicted RBP19.8■□□□□ 0.76
CCS-206ENST00000530961 RFC4P35249 363 aa19.8■□□□□ 0.76
CCS-206ENST00000530961 EIF5P55010 431 aaKnown RBP19.8■□□□□ 0.76
CCS-206ENST00000530961 DUSP27Q5VZP5 1158 aa19.8■□□□□ 0.76
CCS-206ENST00000530961 ZNF526Q8TF50 670 aaPredicted RBP19.8■□□□□ 0.76
CCS-206ENST00000530961 ARHGEF1Q92888 912 aaKnown RBP19.8■□□□□ 0.76
CCS-206ENST00000530961 TSR2Q969E8 191 aaKnown RBP19.8■□□□□ 0.76
CCS-206ENST00000530961 ZNF831Q5JPB2 1677 aa19.8■□□□□ 0.76
CCS-206ENST00000530961 ERBB4Q15303 1308 aa19.79■□□□□ 0.76
CCS-206ENST00000530961 A0A087WZG4 1122 aa19.79■□□□□ 0.76
CCS-206ENST00000530961 E9PSI1 815 aa19.79■□□□□ 0.76
CCS-206ENST00000530961 POLD1P28340 1107 aa19.79■□□□□ 0.76
CCS-206ENST00000530961 KRT24Q2M2I5 525 aa19.79■□□□□ 0.76
CCS-206ENST00000530961 EIF2S2P20042 333 aaKnown RBP19.78■□□□□ 0.76
CCS-206ENST00000530961 HNRNPUQ00839 825 aaKnown RBP eCLIP19.78■□□□□ 0.76
CCS-206ENST00000530961 SMIM5Q71RC9 77 aa19.78■□□□□ 0.76
CCS-206ENST00000530961 SPINK5Q9NQ38 1064 aaPredicted RBP19.78■□□□□ 0.76
CCS-206ENST00000530961 SIPA1L3O60292 1781 aaPredicted RBP19.78■□□□□ 0.76
CCS-206ENST00000530961 FANCIQ9NVI1 1328 aa19.77■□□□□ 0.76
CCS-206ENST00000530961 C8orf58Q8NAV2 365 aa19.77■□□□□ 0.76
CCS-206ENST00000530961 C4BP0C0L5 1744 aa19.76■□□□□ 0.75
CCS-206ENST00000530961 C5P01031 1676 aa19.76■□□□□ 0.75
CCS-206ENST00000530961 NBPF26B4DH59 902 aa19.76■□□□□ 0.75
CCS-206ENST00000530961 NBPF10Q6P3W6 841 aaKnown RBP19.76■□□□□ 0.75
CCS-206ENST00000530961 NBPF15Q8N660 670 aa19.76■□□□□ 0.75
CCS-206ENST00000530961 ELL2O00472 640 aaPredicted RBP19.75■□□□□ 0.75
CCS-206ENST00000530961 ZPR1O75312 459 aa19.75■□□□□ 0.75
CCS-206ENST00000530961 YBX3P16989 372 aaKnown RBP eCLIP19.75■□□□□ 0.75
CCS-206ENST00000530961 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
CCS-206ENST00000530961 HDGFL1Q5TGJ6 251 aa19.75■□□□□ 0.75
CCS-206ENST00000530961 DLG5Q8TDM6 1919 aa19.74■□□□□ 0.75
CCS-206ENST00000530961 ADCY9O60503 1353 aa19.74■□□□□ 0.75
CCS-206ENST00000530961 COL15A1P39059 1388 aa19.74■□□□□ 0.75
CCS-206ENST00000530961 CICQ96RK0 1608 aaPredicted RBP19.74■□□□□ 0.75
CCS-206ENST00000530961 NLGN1Q8N2Q7 840 aa19.74■□□□□ 0.75
CCS-206ENST00000530961 NARFQ9UHQ1 456 aa19.74■□□□□ 0.75
CCS-206ENST00000530961 ZNF330Q9Y3S2 320 aaPredicted RBP19.74■□□□□ 0.75
CCS-206ENST00000530961 UBR2Q8IWV8 1755 aa19.73■□□□□ 0.75
CCS-206ENST00000530961 TWISTNBQ3B726 338 aaPredicted RBP19.73■□□□□ 0.75
CCS-206ENST00000530961 TSPYL6Q8N831 410 aa19.73■□□□□ 0.75
CCS-206ENST00000530961 NLGN2Q8NFZ4 835 aa19.73■□□□□ 0.75
CCS-206ENST00000530961 USP42Q9H9J4 1324 aaKnown RBP19.73■□□□□ 0.75
CCS-206ENST00000530961 PIP4K2AP48426 406 aaPredicted RBP19.72■□□□□ 0.75
CCS-206ENST00000530961 EXOSC9Q06265 439 aaKnown RBP19.72■□□□□ 0.75
CCS-206ENST00000530961 PDIA6Q15084 440 aa19.72■□□□□ 0.75
CCS-206ENST00000530961 CCDC30Q5VVM6 783 aa19.72■□□□□ 0.75
CCS-206ENST00000530961 DDX21Q9NR30 783 aaKnown RBP eCLIP19.72■□□□□ 0.75
CCS-206ENST00000530961 DBF4Q9UBU7 674 aaPredicted RBP19.72■□□□□ 0.75
CCS-206ENST00000530961 MYL6BP14649 208 aa19.71■□□□□ 0.75
CCS-206ENST00000530961 DZIP3Q86Y13 1208 aaKnown RBP19.71■□□□□ 0.75
CCS-206ENST00000530961 TRMT2AQ8IZ69 625 aaKnown RBP19.71■□□□□ 0.75
CCS-206ENST00000530961 NECTIN2Q92692 538 aa19.71■□□□□ 0.75
CCS-206ENST00000530961 CDCA7LQ96GN5 454 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms