RNA–Protein interactions for RNA: ENST00000529813.1

USP47-208, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 3,123 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-208ENST00000529813 NLGN1Q8N2Q7 840 aa6.02□□□□□ -1.45
USP47-208ENST00000529813 PLEKHF1Q96S99 279 aa6.02□□□□□ -1.45
USP47-208ENST00000529813 BTAF1O14981 1849 aa6.01□□□□□ -1.45
USP47-208ENST00000529813 INTS5Q6P9B9 1019 aaKnown RBP6.01□□□□□ -1.45
USP47-208ENST00000529813 DZIP3Q86Y13 1208 aaKnown RBP6.01□□□□□ -1.45
USP47-208ENST00000529813 TEX13AQ9BXU3 409 aaPredicted RBP6.01□□□□□ -1.45
USP47-208ENST00000529813 ZBTB3Q9H5J0 574 aa6.01□□□□□ -1.45
USP47-208ENST00000529813 BCS1LQ9Y276 419 aa6.01□□□□□ -1.45
USP47-208ENST00000529813 NCAPD2Q15021 1401 aa6.01□□□□□ -1.45
USP47-208ENST00000529813 TNS1Q9HBL0 1735 aaKnown RBP6.01□□□□□ -1.45
USP47-208ENST00000529813 ANKRD26Q9UPS8 1709 aa6.01□□□□□ -1.45
USP47-208ENST00000529813 GPTP24298 496 aa6.01□□□□□ -1.45
USP47-208ENST00000529813 PNISRQ8TF01 805 aaKnown RBP6.01□□□□□ -1.45
USP47-208ENST00000529813 COL3A1P02461 1466 aaPredicted RBP6.01□□□□□ -1.45
USP47-208ENST00000529813 A0A0G2JLW4 131 aa6.01□□□□□ -1.45
USP47-208ENST00000529813 GYS1P13807 737 aa6.01□□□□□ -1.45
USP47-208ENST00000529813 HEG1Q9ULI3 1381 aa6□□□□□ -1.45
USP47-208ENST00000529813 HTATSF1O43719 755 aaKnown RBP6□□□□□ -1.45
USP47-208ENST00000529813 RC3H1Q5TC82 1133 aaKnown RBP6□□□□□ -1.45
USP47-208ENST00000529813 TSR2Q969E8 191 aaKnown RBP6□□□□□ -1.45
USP47-208ENST00000529813 RTL5Q5HYW3 569 aaPredicted RBP6□□□□□ -1.45
USP47-208ENST00000529813 ZNF526Q8TF50 670 aaPredicted RBP6□□□□□ -1.45
USP47-208ENST00000529813 ZNF622Q969S3 477 aaKnown RBP eCLIP6□□□□□ -1.45
USP47-208ENST00000529813 CNTNAP4Q9C0A0 1308 aa6□□□□□ -1.45
USP47-208ENST00000529813 NHSQ6T4R5 1651 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 YY1P25490 414 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 HDGFL1Q5TGJ6 251 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 KIF6Q6ZMV9 814 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 SETDB2Q96T68 719 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 SBF2Q86WG5 1849 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 A0A087WZG4 1122 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 CHRNA5P30532 468 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 EIF4A1P60842 406 aaKnown RBP5.99□□□□□ -1.45
USP47-208ENST00000529813 NFIXQ14938 502 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 VSIG10Q8N0Z9 540 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 NIP7Q9Y221 180 aaKnown RBP eCLIP5.99□□□□□ -1.45
USP47-208ENST00000529813 COL15A1P39059 1388 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 WNK3Q9BYP7 1800 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 SERPINB2P05120 415 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 CACNB1Q02641 598 aaPredicted RBP5.99□□□□□ -1.45
USP47-208ENST00000529813 NBPF5PQ86XG9 351 aaPredicted RBP5.99□□□□□ -1.45
USP47-208ENST00000529813 MIER1Q8N108 512 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 NARFQ9UHQ1 456 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 TRIM35Q9UPQ4 493 aa5.99□□□□□ -1.45
USP47-208ENST00000529813 SOS1Q07889 1333 aaPredicted RBP5.98□□□□□ -1.45
USP47-208ENST00000529813 USP42Q9H9J4 1324 aaKnown RBP5.98□□□□□ -1.45
USP47-208ENST00000529813 GIGYF1O75420 1035 aaPredicted RBP5.98□□□□□ -1.45
USP47-208ENST00000529813 TBC1D9BQ66K14 1250 aa5.98□□□□□ -1.45
USP47-208ENST00000529813 TTLL7Q6ZT98 887 aa5.98□□□□□ -1.45
USP47-208ENST00000529813 ARHGAP27Q6ZUM4 889 aa5.98□□□□□ -1.45
USP47-208ENST00000529813 CEMIPQ8WUJ3 1361 aa5.98□□□□□ -1.45
USP47-208ENST00000529813 DPEP1P16444 411 aa5.98□□□□□ -1.45
USP47-208ENST00000529813 IL6STP40189 918 aaPredicted RBP5.98□□□□□ -1.45
USP47-208ENST00000529813 EIF5P55010 431 aaKnown RBP5.98□□□□□ -1.45
USP47-208ENST00000529813 GNAI1P63096 354 aa5.98□□□□□ -1.45
USP47-208ENST00000529813 CALD1Q05682 793 aaKnown RBP5.98□□□□□ -1.45
USP47-208ENST00000529813 DUSP27Q5VZP5 1158 aa5.98□□□□□ -1.45
USP47-208ENST00000529813 MBIPQ9NS73 344 aa5.98□□□□□ -1.45
USP47-208ENST00000529813 ZNF652Q9Y2D9 606 aa5.98□□□□□ -1.45
USP47-208ENST00000529813 NBPF26B4DH59 902 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 DDR1Q08345 913 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 PROSER3Q2NL68 480 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 NBPF10Q6P3W6 841 aaKnown RBP5.97□□□□□ -1.45
USP47-208ENST00000529813 NBPF15Q8N660 670 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 SGIP1Q9BQI5 828 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 GOLGB1Q14789 3259 aaKnown RBP5.97□□□□□ -1.45
USP47-208ENST00000529813 COPS6Q7L5N1 327 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 NUTM1Q86Y26 1132 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 CNBD1Q8NA66 436 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 XAGE3Q8WTP9 111 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 CHPF2Q9P2E5 772 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 NUP188Q5SRE5 1749 aa5.97□□□□□ -1.45
USP47-208ENST00000529813 HLFQ16534 295 aa5.96□□□□□ -1.45
USP47-208ENST00000529813 C2CD5Q86YS7 1000 aa5.96□□□□□ -1.45
USP47-208ENST00000529813 UTRNP46939 3433 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 ATP5J2-PTCD1G3V325 749 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 RIC3Q7Z5B4 369 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 WWC1Q8IX03 1113 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 CFAP44Q96MT7 982 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 STK31Q9BXU1 1019 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 PKD1L3Q7Z443 1732 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 TOGARAM1Q9Y4F4 1720 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 H0YIN7 160 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 CHL1O00533 1208 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 ST5P78524 1137 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 C8orf58Q8NAV2 365 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 JARID2Q92833 1246 aaPredicted RBP5.96□□□□□ -1.46
USP47-208ENST00000529813 CD2APQ9Y5K6 639 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 SHANK3Q9BYB0 1731 aa5.96□□□□□ -1.46
USP47-208ENST00000529813 YBX3P16989 372 aaKnown RBP eCLIP5.95□□□□□ -1.46
USP47-208ENST00000529813 TPTE2Q6XPS3 522 aa5.95□□□□□ -1.46
USP47-208ENST00000529813 TSPYL6Q8N831 410 aa5.95□□□□□ -1.46
USP47-208ENST00000529813 BCL2L12Q9HB09 334 aa5.95□□□□□ -1.46
USP47-208ENST00000529813 ITGB4P16144 1822 aa5.95□□□□□ -1.46
USP47-208ENST00000529813 POLRMTO00411 1230 aaKnown RBP5.95□□□□□ -1.46
USP47-208ENST00000529813 CAMTA2O94983 1202 aa5.95□□□□□ -1.46
USP47-208ENST00000529813 HNRNPUQ00839 825 aaKnown RBP eCLIP5.95□□□□□ -1.46
USP47-208ENST00000529813 GOLGA2Q08379 1002 aa5.95□□□□□ -1.46
USP47-208ENST00000529813 CCDC85AQ96PX6 553 aaPredicted RBP5.95□□□□□ -1.46
USP47-208ENST00000529813 PIM2Q9P1W9 311 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms