RNA–Protein interactions for RNA: ENST00000529347.1

CDKL1-206, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 2

Gene CDKL1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-206ENST00000529347 COL23A1Q86Y22 540 aaPredicted RBP18.37■□□□□ 0.53
CDKL1-206ENST00000529347 TEX13AQ9BXU3 409 aaPredicted RBP18.37■□□□□ 0.53
CDKL1-206ENST00000529347 MBIPQ9NS73 344 aa18.37■□□□□ 0.53
CDKL1-206ENST00000529347 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
CDKL1-206ENST00000529347 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
CDKL1-206ENST00000529347 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
CDKL1-206ENST00000529347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.36■□□□□ 0.53
CDKL1-206ENST00000529347 ZBTB7AO95365 584 aa18.36■□□□□ 0.53
CDKL1-206ENST00000529347 CANXP27824 592 aaKnown RBP18.36■□□□□ 0.53
CDKL1-206ENST00000529347 PIP4K2AP48426 406 aaPredicted RBP18.36■□□□□ 0.53
CDKL1-206ENST00000529347 KRT24Q2M2I5 525 aa18.36■□□□□ 0.53
CDKL1-206ENST00000529347 INTS5Q6P9B9 1019 aaKnown RBP18.36■□□□□ 0.53
CDKL1-206ENST00000529347 ZBTB1Q9Y2K1 713 aa18.36■□□□□ 0.53
CDKL1-206ENST00000529347 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
CDKL1-206ENST00000529347 A1BGP04217 495 aa18.35■□□□□ 0.53
CDKL1-206ENST00000529347 ZNF853P0CG23 659 aa18.35■□□□□ 0.53
CDKL1-206ENST00000529347 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
CDKL1-206ENST00000529347 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
CDKL1-206ENST00000529347 RPS6KA4O75676 772 aa18.34■□□□□ 0.53
CDKL1-206ENST00000529347 SSFA2P28290 1259 aa18.34■□□□□ 0.53
CDKL1-206ENST00000529347 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
CDKL1-206ENST00000529347 ATF5Q9Y2D1 282 aaPredicted RBP18.34■□□□□ 0.53
CDKL1-206ENST00000529347 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.52
CDKL1-206ENST00000529347 TRAPPC3LQ5T215 181 aa18.33■□□□□ 0.52
CDKL1-206ENST00000529347 NGEFQ8N5V2 710 aa18.33■□□□□ 0.52
CDKL1-206ENST00000529347 FLAD1Q8NFF5 587 aa18.33■□□□□ 0.52
CDKL1-206ENST00000529347 NECTIN2Q92692 538 aa18.33■□□□□ 0.52
CDKL1-206ENST00000529347 MSL1Q68DK7 614 aa18.32■□□□□ 0.52
CDKL1-206ENST00000529347 WDR63Q8IWG1 891 aa18.32■□□□□ 0.52
CDKL1-206ENST00000529347 SRCAPQ6ZRS2 3230 aa18.32■□□□□ 0.52
CDKL1-206ENST00000529347 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
CDKL1-206ENST00000529347 IL16Q14005 1332 aa18.31■□□□□ 0.52
CDKL1-206ENST00000529347 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
CDKL1-206ENST00000529347 RFC4P35249 363 aa18.31■□□□□ 0.52
CDKL1-206ENST00000529347 ARHGEF1Q92888 912 aaKnown RBP18.31■□□□□ 0.52
CDKL1-206ENST00000529347 ARXQ96QS3 562 aa18.31■□□□□ 0.52
CDKL1-206ENST00000529347 COL15A1P39059 1388 aa18.3■□□□□ 0.52
CDKL1-206ENST00000529347 HNRNPUQ00839 825 aaKnown RBP eCLIP18.3■□□□□ 0.52
CDKL1-206ENST00000529347 SPINK5Q9NQ38 1064 aaPredicted RBP18.3■□□□□ 0.52
CDKL1-206ENST00000529347 FANCIQ9NVI1 1328 aa18.29■□□□□ 0.52
CDKL1-206ENST00000529347 ADRA2BP18089 450 aa18.29■□□□□ 0.52
CDKL1-206ENST00000529347 DUSP27Q5VZP5 1158 aa18.29■□□□□ 0.52
CDKL1-206ENST00000529347 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
CDKL1-206ENST00000529347 MTFR1LQ9H019 292 aa18.29■□□□□ 0.52
CDKL1-206ENST00000529347 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
CDKL1-206ENST00000529347 ZNF521Q96K83 1311 aa18.28■□□□□ 0.52
CDKL1-206ENST00000529347 MYL6BP14649 208 aa18.28■□□□□ 0.52
CDKL1-206ENST00000529347 C8orf58Q8NAV2 365 aa18.28■□□□□ 0.52
CDKL1-206ENST00000529347 SPON1Q9HCB6 807 aa18.28■□□□□ 0.52
CDKL1-206ENST00000529347 NBPF26B4DH59 902 aa18.27■□□□□ 0.52
CDKL1-206ENST00000529347 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.52
CDKL1-206ENST00000529347 NBPF15Q8N660 670 aa18.27■□□□□ 0.52
CDKL1-206ENST00000529347 SLC16A10Q8TF71 515 aa18.27■□□□□ 0.52
CDKL1-206ENST00000529347 ZPR1O75312 459 aa18.26■□□□□ 0.51
CDKL1-206ENST00000529347 ANXA1P04083 346 aa18.26■□□□□ 0.51
CDKL1-206ENST00000529347 IL6STP40189 918 aaPredicted RBP18.26■□□□□ 0.51
CDKL1-206ENST00000529347 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
CDKL1-206ENST00000529347 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
CDKL1-206ENST00000529347 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
CDKL1-206ENST00000529347 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
CDKL1-206ENST00000529347 TBC1D2BQ9UPU7 963 aa18.26■□□□□ 0.51
CDKL1-206ENST00000529347 LRP5O75197 1615 aa18.26■□□□□ 0.51
CDKL1-206ENST00000529347 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
CDKL1-206ENST00000529347 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
CDKL1-206ENST00000529347 BCORQ6W2J9 1755 aa18.25■□□□□ 0.51
CDKL1-206ENST00000529347 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
CDKL1-206ENST00000529347 COL24A1Q17RW2 1714 aa18.24■□□□□ 0.51
CDKL1-206ENST00000529347 A0A087WZG4 1122 aa18.24■□□□□ 0.51
CDKL1-206ENST00000529347 EXOSC9Q06265 439 aaKnown RBP18.24■□□□□ 0.51
CDKL1-206ENST00000529347 USPL1Q5W0Q7 1092 aa18.24■□□□□ 0.51
CDKL1-206ENST00000529347 CDCA7LQ96GN5 454 aa18.24■□□□□ 0.51
CDKL1-206ENST00000529347 HOXB7P09629 217 aa18.23■□□□□ 0.51
CDKL1-206ENST00000529347 GYS1P13807 737 aa18.23■□□□□ 0.51
CDKL1-206ENST00000529347 POLD1P28340 1107 aa18.23■□□□□ 0.51
CDKL1-206ENST00000529347 PROSER3Q2NL68 480 aa18.23■□□□□ 0.51
CDKL1-206ENST00000529347 DZIP3Q86Y13 1208 aaKnown RBP18.23■□□□□ 0.51
CDKL1-206ENST00000529347 CHPF2Q9P2E5 772 aa18.23■□□□□ 0.51
CDKL1-206ENST00000529347 PPP1R1BQ9UD71 204 aaPredicted RBP18.23■□□□□ 0.51
CDKL1-206ENST00000529347 NUP98P52948 1817 aa18.22■□□□□ 0.51
CDKL1-206ENST00000529347 E9PSI1 815 aa18.22■□□□□ 0.51
CDKL1-206ENST00000529347 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
CDKL1-206ENST00000529347 NARFQ9UHQ1 456 aa18.22■□□□□ 0.51
CDKL1-206ENST00000529347 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
CDKL1-206ENST00000529347 PTGER2P43116 358 aa18.21■□□□□ 0.51
CDKL1-206ENST00000529347 FKBP8Q14318 412 aa18.21■□□□□ 0.51
CDKL1-206ENST00000529347 ERBB4Q15303 1308 aa18.21■□□□□ 0.51
CDKL1-206ENST00000529347 SLFN5Q08AF3 891 aa18.2■□□□□ 0.5
CDKL1-206ENST00000529347 AIMP1Q12904 312 aaKnown RBP18.2■□□□□ 0.5
CDKL1-206ENST00000529347 PDIA6Q15084 440 aa18.2■□□□□ 0.5
CDKL1-206ENST00000529347 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
CDKL1-206ENST00000529347 CACNA1FO60840 1977 aa18.2■□□□□ 0.5
CDKL1-206ENST00000529347 MMP10P09238 476 aa18.19■□□□□ 0.5
CDKL1-206ENST00000529347 KIF6Q6ZMV9 814 aa18.19■□□□□ 0.5
CDKL1-206ENST00000529347 BICDL1Q6ZP65 573 aa18.19■□□□□ 0.5
CDKL1-206ENST00000529347 TTLL7Q6ZT98 887 aa18.19■□□□□ 0.5
CDKL1-206ENST00000529347 NLGN1Q8N2Q7 840 aa18.19■□□□□ 0.5
CDKL1-206ENST00000529347 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
CDKL1-206ENST00000529347 CAMTA2O94983 1202 aa18.18■□□□□ 0.5
CDKL1-206ENST00000529347 CCDC30Q5VVM6 783 aa18.18■□□□□ 0.5
CDKL1-206ENST00000529347 SGIP1Q9BQI5 828 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms