RNA–Protein interactions for RNA: ENST00000529143.1

COMMD5-204, Transcript of COMM domain containing 5, humanhuman

TSL 3

Gene COMMD5, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-204ENST00000529143 USP42Q9H9J4 1324 aaKnown RBP18.5■□□□□ 0.55
COMMD5-204ENST00000529143 FKBP8Q14318 412 aa18.5■□□□□ 0.55
COMMD5-204ENST00000529143 NLGN1Q8N2Q7 840 aa18.5■□□□□ 0.55
COMMD5-204ENST00000529143 THUMPD2Q9BTF0 503 aaKnown RBP18.5■□□□□ 0.55
COMMD5-204ENST00000529143 PRAMEF22A3QJZ6 481 aa18.49■□□□□ 0.55
COMMD5-204ENST00000529143 FMNL2Q96PY5 1086 aa18.49■□□□□ 0.55
COMMD5-204ENST00000529143 MIS18AQ9NYP9 233 aa18.49■□□□□ 0.55
COMMD5-204ENST00000529143 C4AP0C0L4 1744 aa18.49■□□□□ 0.55
COMMD5-204ENST00000529143 YBX3P16989 372 aaKnown RBP eCLIP18.48■□□□□ 0.55
COMMD5-204ENST00000529143 YY1P25490 414 aa18.48■□□□□ 0.55
COMMD5-204ENST00000529143 CANXP27824 592 aaKnown RBP18.48■□□□□ 0.55
COMMD5-204ENST00000529143 STARD3NLO95772 234 aa18.47■□□□□ 0.55
COMMD5-204ENST00000529143 DDR1Q08345 913 aa18.47■□□□□ 0.55
COMMD5-204ENST00000529143 TAF7Q15545 349 aaPredicted RBP18.47■□□□□ 0.55
COMMD5-204ENST00000529143 BCL2L12Q9HB09 334 aa18.47■□□□□ 0.55
COMMD5-204ENST00000529143 COL15A1P39059 1388 aa18.46■□□□□ 0.55
COMMD5-204ENST00000529143 A1BGP04217 495 aa18.46■□□□□ 0.55
COMMD5-204ENST00000529143 EIF5P55010 431 aaKnown RBP18.46■□□□□ 0.55
COMMD5-204ENST00000529143 GPR162Q16538 588 aa18.46■□□□□ 0.55
COMMD5-204ENST00000529143 USPL1Q5W0Q7 1092 aa18.46■□□□□ 0.55
COMMD5-204ENST00000529143 USP16Q9Y5T5 823 aa18.46■□□□□ 0.55
COMMD5-204ENST00000529143 MAPK8IP3Q9UPT6 1336 aa18.46■□□□□ 0.55
COMMD5-204ENST00000529143 NEFMP07197 916 aa18.45■□□□□ 0.54
COMMD5-204ENST00000529143 CCDC146Q8IYE0 955 aa18.45■□□□□ 0.54
COMMD5-204ENST00000529143 TEX13AQ9BXU3 409 aaPredicted RBP18.45■□□□□ 0.54
COMMD5-204ENST00000529143 PNNQ9H307 717 aaKnown RBP18.45■□□□□ 0.54
COMMD5-204ENST00000529143 NARFQ9UHQ1 456 aa18.45■□□□□ 0.54
COMMD5-204ENST00000529143 ADAMTS8Q9UP79 889 aa18.45■□□□□ 0.54
COMMD5-204ENST00000529143 TM4SF1P30408 202 aa18.44■□□□□ 0.54
COMMD5-204ENST00000529143 WDR43Q15061 677 aaKnown RBP eCLIP18.44■□□□□ 0.54
COMMD5-204ENST00000529143 PELP1Q8IZL8 1130 aaKnown RBP18.44■□□□□ 0.54
COMMD5-204ENST00000529143 FAM9BQ8IZU0 186 aa18.44■□□□□ 0.54
COMMD5-204ENST00000529143 C10orf71Q711Q0 1435 aa18.43■□□□□ 0.54
COMMD5-204ENST00000529143 ZPR1O75312 459 aa18.43■□□□□ 0.54
COMMD5-204ENST00000529143 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
COMMD5-204ENST00000529143 PIP4K2AP48426 406 aaPredicted RBP18.43■□□□□ 0.54
COMMD5-204ENST00000529143 RRP7AQ9Y3A4 280 aaKnown RBP18.43■□□□□ 0.54
COMMD5-204ENST00000529143 POLRMTO00411 1230 aaKnown RBP18.42■□□□□ 0.54
COMMD5-204ENST00000529143 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
COMMD5-204ENST00000529143 RIPK4P57078 832 aa18.42■□□□□ 0.54
COMMD5-204ENST00000529143 WWC3Q9ULE0 1092 aa18.42■□□□□ 0.54
COMMD5-204ENST00000529143 PARP3Q9Y6F1 533 aa18.42■□□□□ 0.54
COMMD5-204ENST00000529143 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
COMMD5-204ENST00000529143 NFIXQ14938 502 aa18.41■□□□□ 0.54
COMMD5-204ENST00000529143 PXDNLA1KZ92 1463 aa18.4■□□□□ 0.54
COMMD5-204ENST00000529143 NBPF26B4DH59 902 aa18.4■□□□□ 0.54
COMMD5-204ENST00000529143 IL6STP40189 918 aaPredicted RBP18.4■□□□□ 0.54
COMMD5-204ENST00000529143 NBPF10Q6P3W6 841 aaKnown RBP18.4■□□□□ 0.54
COMMD5-204ENST00000529143 NBPF15Q8N660 670 aa18.4■□□□□ 0.54
COMMD5-204ENST00000529143 TBC1D2BQ9UPU7 963 aa18.4■□□□□ 0.54
COMMD5-204ENST00000529143 EIF4A1P60842 406 aaKnown RBP18.39■□□□□ 0.53
COMMD5-204ENST00000529143 RUNDC1Q96C34 613 aa18.39■□□□□ 0.53
COMMD5-204ENST00000529143 TRIM35Q9UPQ4 493 aa18.39■□□□□ 0.53
COMMD5-204ENST00000529143 A0A0G2JLW4 131 aa18.38■□□□□ 0.53
COMMD5-204ENST00000529143 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
COMMD5-204ENST00000529143 KIAA1551Q9HCM1 1747 aa18.37■□□□□ 0.53
COMMD5-204ENST00000529143 A0A087WZG4 1122 aa18.37■□□□□ 0.53
COMMD5-204ENST00000529143 GIGYF1O75420 1035 aaPredicted RBP18.37■□□□□ 0.53
COMMD5-204ENST00000529143 CAMTA2O94983 1202 aa18.37■□□□□ 0.53
COMMD5-204ENST00000529143 DPEP1P16444 411 aa18.37■□□□□ 0.53
COMMD5-204ENST00000529143 KCNA3P22001 575 aa18.37■□□□□ 0.53
COMMD5-204ENST00000529143 TGFB2P61812 414 aa18.37■□□□□ 0.53
COMMD5-204ENST00000529143 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
COMMD5-204ENST00000529143 TBC1D9BQ66K14 1250 aa18.36■□□□□ 0.53
COMMD5-204ENST00000529143 KIF13BQ9NQT8 1826 aa18.36■□□□□ 0.53
COMMD5-204ENST00000529143 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
COMMD5-204ENST00000529143 GRIN3BO60391 1043 aa18.35■□□□□ 0.53
COMMD5-204ENST00000529143 BICDL1Q6ZP65 573 aa18.34■□□□□ 0.53
COMMD5-204ENST00000529143 SERPINB2P05120 415 aa18.33■□□□□ 0.52
COMMD5-204ENST00000529143 DZIP3Q86Y13 1208 aaKnown RBP18.33■□□□□ 0.52
COMMD5-204ENST00000529143 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
COMMD5-204ENST00000529143 CHRNA5P30532 468 aa18.32■□□□□ 0.52
COMMD5-204ENST00000529143 LMOD3Q0VAK6 560 aa18.32■□□□□ 0.52
COMMD5-204ENST00000529143 CARMIL3Q8ND23 1372 aa18.31■□□□□ 0.52
COMMD5-204ENST00000529143 ZNF784Q8NCA9 323 aaPredicted RBP18.31■□□□□ 0.52
COMMD5-204ENST00000529143 SCN7AQ01118 1682 aa18.31■□□□□ 0.52
COMMD5-204ENST00000529143 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
COMMD5-204ENST00000529143 CHL1O00533 1208 aa18.3■□□□□ 0.52
COMMD5-204ENST00000529143 APAF1O14727 1248 aa18.3■□□□□ 0.52
COMMD5-204ENST00000529143 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
COMMD5-204ENST00000529143 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
COMMD5-204ENST00000529143 KRT24Q2M2I5 525 aa18.29■□□□□ 0.52
COMMD5-204ENST00000529143 BCS1LQ9Y276 419 aa18.29■□□□□ 0.52
COMMD5-204ENST00000529143 SENP3-EIF4A1A0A087X0R7 540 aa18.28■□□□□ 0.52
COMMD5-204ENST00000529143 HLFQ16534 295 aa18.28■□□□□ 0.52
COMMD5-204ENST00000529143 LRP10Q7Z4F1 713 aa18.28■□□□□ 0.52
COMMD5-204ENST00000529143 CCDC24Q8N4L8 307 aa18.28■□□□□ 0.52
COMMD5-204ENST00000529143 PDIA6Q15084 440 aa18.27■□□□□ 0.52
COMMD5-204ENST00000529143 PRR5LQ6MZQ0 368 aa18.27■□□□□ 0.52
COMMD5-204ENST00000529143 TTLL7Q6ZT98 887 aa18.27■□□□□ 0.52
COMMD5-204ENST00000529143 NPM2Q86SE8 214 aaKnown RBP18.27■□□□□ 0.52
COMMD5-204ENST00000529143 NGEFQ8N5V2 710 aa18.27■□□□□ 0.52
COMMD5-204ENST00000529143 AFDNP55196 1824 aaKnown RBP18.27■□□□□ 0.52
COMMD5-204ENST00000529143 PROSER3Q2NL68 480 aa18.26■□□□□ 0.51
COMMD5-204ENST00000529143 CLEC4GQ6UXB4 293 aa18.26■□□□□ 0.51
COMMD5-204ENST00000529143 SETDB2Q96T68 719 aa18.26■□□□□ 0.51
COMMD5-204ENST00000529143 PIM2Q9P1W9 311 aa18.26■□□□□ 0.51
COMMD5-204ENST00000529143 LAMB4A4D0S4 1761 aa18.26■□□□□ 0.51
COMMD5-204ENST00000529143 CHD4Q14839 1912 aa18.25■□□□□ 0.51
COMMD5-204ENST00000529143 BCORQ6W2J9 1755 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms