RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 GNPATO15228 680 aa16.84■□□□□ 0.29
SCN3B-205ENST00000528267 GIGYF1O75420 1035 aaPredicted RBP16.84■□□□□ 0.29
SCN3B-205ENST00000528267 RC3H1Q5TC82 1133 aaKnown RBP16.84■□□□□ 0.29
SCN3B-205ENST00000528267 AK7Q96M32 723 aa16.84■□□□□ 0.29
SCN3B-205ENST00000528267 IFT57Q9NWB7 429 aa16.84■□□□□ 0.29
SCN3B-205ENST00000528267 TFCP2L1Q9NZI6 479 aa16.84■□□□□ 0.29
SCN3B-205ENST00000528267 PHF14O94880 888 aa16.83■□□□□ 0.28
SCN3B-205ENST00000528267 PIP4K2AP48426 406 aaPredicted RBP16.83■□□□□ 0.28
SCN3B-205ENST00000528267 TSR2Q969E8 191 aaKnown RBP16.83■□□□□ 0.28
SCN3B-205ENST00000528267 BCORQ6W2J9 1755 aa16.82■□□□□ 0.28
SCN3B-205ENST00000528267 LRP5O75197 1615 aa16.82■□□□□ 0.28
SCN3B-205ENST00000528267 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
SCN3B-205ENST00000528267 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.82■□□□□ 0.28
SCN3B-205ENST00000528267 A1BGP04217 495 aa16.82■□□□□ 0.28
SCN3B-205ENST00000528267 SNRPA1P09661 255 aaKnown RBP16.82■□□□□ 0.28
SCN3B-205ENST00000528267 CCDC87Q9NVE4 849 aa16.82■□□□□ 0.28
SCN3B-205ENST00000528267 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
SCN3B-205ENST00000528267 NBPF26B4DH59 902 aa16.81■□□□□ 0.28
SCN3B-205ENST00000528267 RPS6KA4O75676 772 aa16.81■□□□□ 0.28
SCN3B-205ENST00000528267 NBPF10Q6P3W6 841 aaKnown RBP16.81■□□□□ 0.28
SCN3B-205ENST00000528267 NBPF15Q8N660 670 aa16.81■□□□□ 0.28
SCN3B-205ENST00000528267 IL16Q14005 1332 aa16.8■□□□□ 0.28
SCN3B-205ENST00000528267 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
SCN3B-205ENST00000528267 SSFA2P28290 1259 aa16.8■□□□□ 0.28
SCN3B-205ENST00000528267 GNAI1P63096 354 aa16.8■□□□□ 0.28
SCN3B-205ENST00000528267 FANCIQ9NVI1 1328 aa16.79■□□□□ 0.28
SCN3B-205ENST00000528267 WDR63Q8IWG1 891 aa16.79■□□□□ 0.28
SCN3B-205ENST00000528267 C8orf58Q8NAV2 365 aa16.79■□□□□ 0.28
SCN3B-205ENST00000528267 ARHGEF1Q92888 912 aaKnown RBP16.79■□□□□ 0.28
SCN3B-205ENST00000528267 COL15A1P39059 1388 aa16.78■□□□□ 0.28
SCN3B-205ENST00000528267 CANXP27824 592 aaKnown RBP16.78■□□□□ 0.28
SCN3B-205ENST00000528267 LRP10Q7Z4F1 713 aa16.78■□□□□ 0.28
SCN3B-205ENST00000528267 TSPYL6Q8N831 410 aa16.78■□□□□ 0.28
SCN3B-205ENST00000528267 SGIP1Q9BQI5 828 aa16.78■□□□□ 0.28
SCN3B-205ENST00000528267 RTCBQ9Y3I0 505 aaKnown RBP16.78■□□□□ 0.28
SCN3B-205ENST00000528267 STARD3NLO95772 234 aa16.77■□□□□ 0.28
SCN3B-205ENST00000528267 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.28
SCN3B-205ENST00000528267 CALD1Q05682 793 aaKnown RBP16.77■□□□□ 0.28
SCN3B-205ENST00000528267 PDIA6Q15084 440 aa16.77■□□□□ 0.28
SCN3B-205ENST00000528267 TEX13AQ9BXU3 409 aaPredicted RBP16.77■□□□□ 0.28
SCN3B-205ENST00000528267 SRP68Q9UHB9 627 aaKnown RBP16.77■□□□□ 0.28
SCN3B-205ENST00000528267 PTGER2P43116 358 aa16.76■□□□□ 0.27
SCN3B-205ENST00000528267 PROSER3Q2NL68 480 aa16.76■□□□□ 0.27
SCN3B-205ENST00000528267 MSL1Q68DK7 614 aa16.76■□□□□ 0.27
SCN3B-205ENST00000528267 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
SCN3B-205ENST00000528267 CDCA7LQ96GN5 454 aa16.76■□□□□ 0.27
SCN3B-205ENST00000528267 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
SCN3B-205ENST00000528267 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
SCN3B-205ENST00000528267 ANXA1P04083 346 aa16.75■□□□□ 0.27
SCN3B-205ENST00000528267 DUSP27Q5VZP5 1158 aa16.75■□□□□ 0.27
SCN3B-205ENST00000528267 NECTIN2Q92692 538 aa16.75■□□□□ 0.27
SCN3B-205ENST00000528267 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
SCN3B-205ENST00000528267 ELL2O00472 640 aaPredicted RBP16.74■□□□□ 0.27
SCN3B-205ENST00000528267 ADRA2BP18089 450 aa16.74■□□□□ 0.27
SCN3B-205ENST00000528267 EIF2S2P20042 333 aaKnown RBP16.74■□□□□ 0.27
SCN3B-205ENST00000528267 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
SCN3B-205ENST00000528267 TRAPPC3LQ5T215 181 aa16.74■□□□□ 0.27
SCN3B-205ENST00000528267 FLAD1Q8NFF5 587 aa16.74■□□□□ 0.27
SCN3B-205ENST00000528267 MTFR1LQ9H019 292 aa16.74■□□□□ 0.27
SCN3B-205ENST00000528267 MSH5O43196 834 aa16.73■□□□□ 0.27
SCN3B-205ENST00000528267 GYS1P13807 737 aa16.73■□□□□ 0.27
SCN3B-205ENST00000528267 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
SCN3B-205ENST00000528267 HNRNPUQ00839 825 aaKnown RBP eCLIP16.72■□□□□ 0.27
SCN3B-205ENST00000528267 SLFN5Q08AF3 891 aa16.72■□□□□ 0.27
SCN3B-205ENST00000528267 SLC16A10Q8TF71 515 aa16.72■□□□□ 0.27
SCN3B-205ENST00000528267 NUP98P52948 1817 aa16.72■□□□□ 0.27
SCN3B-205ENST00000528267 AFDNP55196 1824 aaKnown RBP16.72■□□□□ 0.27
SCN3B-205ENST00000528267 HOXB7P09629 217 aa16.71■□□□□ 0.27
SCN3B-205ENST00000528267 MYL6BP14649 208 aa16.71■□□□□ 0.27
SCN3B-205ENST00000528267 EXOSC9Q06265 439 aaKnown RBP16.71■□□□□ 0.27
SCN3B-205ENST00000528267 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
SCN3B-205ENST00000528267 FKBP8Q14318 412 aa16.71■□□□□ 0.27
SCN3B-205ENST00000528267 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
SCN3B-205ENST00000528267 TRMT2AQ8IZ69 625 aaKnown RBP16.71■□□□□ 0.27
SCN3B-205ENST00000528267 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.27
SCN3B-205ENST00000528267 ZNF330Q9Y3S2 320 aaPredicted RBP16.71■□□□□ 0.27
SCN3B-205ENST00000528267 CAMTA2O94983 1202 aa16.7■□□□□ 0.26
SCN3B-205ENST00000528267 RFC4P35249 363 aa16.7■□□□□ 0.26
SCN3B-205ENST00000528267 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
SCN3B-205ENST00000528267 TTLL7Q6ZT98 887 aa16.7■□□□□ 0.26
SCN3B-205ENST00000528267 CHPF2Q9P2E5 772 aa16.7■□□□□ 0.26
SCN3B-205ENST00000528267 NARFQ9UHQ1 456 aa16.7■□□□□ 0.26
SCN3B-205ENST00000528267 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
SCN3B-205ENST00000528267 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
SCN3B-205ENST00000528267 SPON1Q9HCB6 807 aa16.69■□□□□ 0.26
SCN3B-205ENST00000528267 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
SCN3B-205ENST00000528267 ANKRD36CQ5JPF3 1778 aa16.69■□□□□ 0.26
SCN3B-205ENST00000528267 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
SCN3B-205ENST00000528267 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
SCN3B-205ENST00000528267 VAMP4O75379 141 aa16.68■□□□□ 0.26
SCN3B-205ENST00000528267 TWISTNBQ3B726 338 aaPredicted RBP16.68■□□□□ 0.26
SCN3B-205ENST00000528267 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
SCN3B-205ENST00000528267 E9PSI1 815 aa16.67■□□□□ 0.26
SCN3B-205ENST00000528267 DDR1Q08345 913 aa16.67■□□□□ 0.26
SCN3B-205ENST00000528267 HLFQ16534 295 aa16.67■□□□□ 0.26
SCN3B-205ENST00000528267 DZIP3Q86Y13 1208 aaKnown RBP16.67■□□□□ 0.26
SCN3B-205ENST00000528267 MYH16Q9H6N6 1097 aa16.67■□□□□ 0.26
SCN3B-205ENST00000528267 DDX21Q9NR30 783 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCN3B-205ENST00000528267 A0A087WZG4 1122 aa16.65■□□□□ 0.26
SCN3B-205ENST00000528267 MMP10P09238 476 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms