RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 INTS5Q6P9B9 1019 aaKnown RBP21.63■■□□□ 1.05
SSH3-205ENST00000527821 SNRPA1P09661 255 aaKnown RBP21.62■■□□□ 1.05
SSH3-205ENST00000527821 BABAM1Q9NWV8 329 aa21.62■■□□□ 1.05
SSH3-205ENST00000527821 ADRA2BP18089 450 aa21.61■■□□□ 1.05
SSH3-205ENST00000527821 PRAMEF22A3QJZ6 481 aa21.6■■□□□ 1.05
SSH3-205ENST00000527821 EIF4A1P60842 406 aaKnown RBP21.6■■□□□ 1.05
SSH3-205ENST00000527821 CALD1Q05682 793 aaKnown RBP21.6■■□□□ 1.05
SSH3-205ENST00000527821 ZBTB1Q9Y2K1 713 aa21.6■■□□□ 1.05
SSH3-205ENST00000527821 USP16Q9Y5T5 823 aa21.6■■□□□ 1.05
SSH3-205ENST00000527821 CANXP27824 592 aaKnown RBP21.59■■□□□ 1.05
SSH3-205ENST00000527821 RFC4P35249 363 aa21.59■■□□□ 1.05
SSH3-205ENST00000527821 MSL1Q68DK7 614 aa21.59■■□□□ 1.05
SSH3-205ENST00000527821 MIER1Q8N108 512 aa21.59■■□□□ 1.05
SSH3-205ENST00000527821 ARHGEF1Q92888 912 aaKnown RBP21.59■■□□□ 1.05
SSH3-205ENST00000527821 PPP1R1BQ9UD71 204 aaPredicted RBP21.59■■□□□ 1.05
SSH3-205ENST00000527821 CHL1O00533 1208 aa21.58■■□□□ 1.05
SSH3-205ENST00000527821 SALL2Q9Y467 1007 aaPredicted RBP21.58■■□□□ 1.05
SSH3-205ENST00000527821 A1BGP04217 495 aa21.57■■□□□ 1.04
SSH3-205ENST00000527821 PTGER2P43116 358 aa21.57■■□□□ 1.04
SSH3-205ENST00000527821 CCDC27Q2M243 656 aa21.57■■□□□ 1.04
SSH3-205ENST00000527821 CFAP44Q96MT7 982 aa21.57■■□□□ 1.04
SSH3-205ENST00000527821 C4AP0C0L4 1744 aa21.57■■□□□ 1.04
SSH3-205ENST00000527821 SOS1Q07889 1333 aaPredicted RBP21.56■■□□□ 1.04
SSH3-205ENST00000527821 GIGYF1O75420 1035 aaPredicted RBP21.56■■□□□ 1.04
SSH3-205ENST00000527821 POLD1P28340 1107 aa21.56■■□□□ 1.04
SSH3-205ENST00000527821 LAMB4A4D0S4 1761 aa21.56■■□□□ 1.04
SSH3-205ENST00000527821 NCBP3Q53F19 620 aaKnown RBP21.55■■□□□ 1.04
SSH3-205ENST00000527821 WWC1Q8IX03 1113 aa21.55■■□□□ 1.04
SSH3-205ENST00000527821 IFT57Q9NWB7 429 aa21.55■■□□□ 1.04
SSH3-205ENST00000527821 ZNF330Q9Y3S2 320 aaPredicted RBP21.55■■□□□ 1.04
SSH3-205ENST00000527821 COL15A1P39059 1388 aa21.54■■□□□ 1.04
SSH3-205ENST00000527821 GNAI1P63096 354 aa21.54■■□□□ 1.04
SSH3-205ENST00000527821 NPM2Q86SE8 214 aaKnown RBP21.54■■□□□ 1.04
SSH3-205ENST00000527821 SGIP1Q9BQI5 828 aa21.54■■□□□ 1.04
SSH3-205ENST00000527821 COL24A1Q17RW2 1714 aa21.54■■□□□ 1.04
SSH3-205ENST00000527821 ZPR1O75312 459 aa21.52■■□□□ 1.04
SSH3-205ENST00000527821 ZNF853P0CG23 659 aa21.52■■□□□ 1.04
SSH3-205ENST00000527821 IL6STP40189 918 aaPredicted RBP21.52■■□□□ 1.04
SSH3-205ENST00000527821 PIP4K2AP48426 406 aaPredicted RBP21.52■■□□□ 1.04
SSH3-205ENST00000527821 EIF5P55010 431 aaKnown RBP21.52■■□□□ 1.04
SSH3-205ENST00000527821 ARXQ96QS3 562 aa21.52■■□□□ 1.04
SSH3-205ENST00000527821 MBIPQ9NS73 344 aa21.52■■□□□ 1.04
SSH3-205ENST00000527821 SRP68Q9UHB9 627 aaKnown RBP21.52■■□□□ 1.04
SSH3-205ENST00000527821 USP42Q9H9J4 1324 aaKnown RBP21.52■■□□□ 1.03
SSH3-205ENST00000527821 SRCAPQ6ZRS2 3230 aa21.51■■□□□ 1.03
SSH3-205ENST00000527821 A0A087WZG4 1122 aa21.5■■□□□ 1.03
SSH3-205ENST00000527821 GYS1P13807 737 aa21.5■■□□□ 1.03
SSH3-205ENST00000527821 KRT24Q2M2I5 525 aa21.5■■□□□ 1.03
SSH3-205ENST00000527821 NLGN1Q8N2Q7 840 aa21.5■■□□□ 1.03
SSH3-205ENST00000527821 NGEFQ8N5V2 710 aa21.5■■□□□ 1.03
SSH3-205ENST00000527821 EIF2S2P20042 333 aaKnown RBP21.49■■□□□ 1.03
SSH3-205ENST00000527821 USPL1Q5W0Q7 1092 aa21.49■■□□□ 1.03
SSH3-205ENST00000527821 NARFQ9UHQ1 456 aa21.48■■□□□ 1.03
SSH3-205ENST00000527821 IL16Q14005 1332 aa21.48■■□□□ 1.03
SSH3-205ENST00000527821 NBPF26B4DH59 902 aa21.47■■□□□ 1.03
SSH3-205ENST00000527821 NBPF10Q6P3W6 841 aaKnown RBP21.47■■□□□ 1.03
SSH3-205ENST00000527821 WDR63Q8IWG1 891 aa21.47■■□□□ 1.03
SSH3-205ENST00000527821 NBPF15Q8N660 670 aa21.47■■□□□ 1.03
SSH3-205ENST00000527821 TBC1D2BQ9UPU7 963 aa21.47■■□□□ 1.03
SSH3-205ENST00000527821 MMP10P09238 476 aa21.46■■□□□ 1.03
SSH3-205ENST00000527821 FKBP8Q14318 412 aa21.46■■□□□ 1.03
SSH3-205ENST00000527821 KLHL34Q8N239 644 aa21.46■■□□□ 1.03
SSH3-205ENST00000527821 MYL6BP14649 208 aa21.45■■□□□ 1.02
SSH3-205ENST00000527821 DZIP3Q86Y13 1208 aaKnown RBP21.45■■□□□ 1.02
SSH3-205ENST00000527821 NECTIN2Q92692 538 aa21.45■■□□□ 1.02
SSH3-205ENST00000527821 TSR2Q969E8 191 aaKnown RBP21.45■■□□□ 1.02
SSH3-205ENST00000527821 DUSP27Q5VZP5 1158 aa21.44■■□□□ 1.02
SSH3-205ENST00000527821 FHDC1Q9C0D6 1143 aaPredicted RBP21.44■■□□□ 1.02
SSH3-205ENST00000527821 ERBB4Q15303 1308 aa21.44■■□□□ 1.02
SSH3-205ENST00000527821 HOXB7P09629 217 aa21.43■■□□□ 1.02
SSH3-205ENST00000527821 ELL2O00472 640 aaPredicted RBP21.42■■□□□ 1.02
SSH3-205ENST00000527821 SCN7AQ01118 1682 aa21.42■■□□□ 1.02
SSH3-205ENST00000527821 HDGFL1Q5TGJ6 251 aa21.42■■□□□ 1.02
SSH3-205ENST00000527821 BCL2L12Q9HB09 334 aa21.42■■□□□ 1.02
SSH3-205ENST00000527821 PARP3Q9Y6F1 533 aa21.42■■□□□ 1.02
SSH3-205ENST00000527821 CAMTA2O94983 1202 aa21.4■■□□□ 1.02
SSH3-205ENST00000527821 C8orf58Q8NAV2 365 aa21.4■■□□□ 1.02
SSH3-205ENST00000527821 SYT17Q9BSW7 474 aa21.4■■□□□ 1.02
SSH3-205ENST00000527821 BCORQ6W2J9 1755 aa21.4■■□□□ 1.02
SSH3-205ENST00000527821 FANCIQ9NVI1 1328 aa21.39■■□□□ 1.01
SSH3-205ENST00000527821 ANXA1P04083 346 aa21.39■■□□□ 1.01
SSH3-205ENST00000527821 PDIA6Q15084 440 aa21.39■■□□□ 1.01
SSH3-205ENST00000527821 BICDL1Q6ZP65 573 aa21.39■■□□□ 1.01
SSH3-205ENST00000527821 TM4SF1P30408 202 aa21.38■■□□□ 1.01
SSH3-205ENST00000527821 NFIXQ14938 502 aa21.38■■□□□ 1.01
SSH3-205ENST00000527821 PROSER3Q2NL68 480 aa21.38■■□□□ 1.01
SSH3-205ENST00000527821 KIF6Q6ZMV9 814 aa21.38■■□□□ 1.01
SSH3-205ENST00000527821 MYH16Q9H6N6 1097 aa21.38■■□□□ 1.01
SSH3-205ENST00000527821 CHPF2Q9P2E5 772 aa21.38■■□□□ 1.01
SSH3-205ENST00000527821 ZNF652Q9Y2D9 606 aa21.38■■□□□ 1.01
SSH3-205ENST00000527821 ZNF521Q96K83 1311 aa21.37■■□□□ 1.01
SSH3-205ENST00000527821 DDR1Q08345 913 aa21.37■■□□□ 1.01
SSH3-205ENST00000527821 GOLGA2Q08379 1002 aa21.37■■□□□ 1.01
SSH3-205ENST00000527821 TBC1D9BQ66K14 1250 aa21.37■■□□□ 1.01
SSH3-205ENST00000527821 TSPYL6Q8N831 410 aa21.37■■□□□ 1.01
SSH3-205ENST00000527821 SPINK5Q9NQ38 1064 aaPredicted RBP21.37■■□□□ 1.01
SSH3-205ENST00000527821 DDX21Q9NR30 783 aaKnown RBP eCLIP21.37■■□□□ 1.01
SSH3-205ENST00000527821 POLRMTO00411 1230 aaKnown RBP21.36■■□□□ 1.01
SSH3-205ENST00000527821 TTLL7Q6ZT98 887 aa21.36■■□□□ 1.01
SSH3-205ENST00000527821 DBF4Q9UBU7 674 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms