RNA–Protein interactions for RNA: ENST00000527698.1

LRRK1-206, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-206ENST00000527698 WWC1Q8IX03 1113 aa30.29■■■□□ 2.44
LRRK1-206ENST00000527698 CNTNAP4Q9C0A0 1308 aa30.28■■■□□ 2.44
LRRK1-206ENST00000527698 SNRPA1P09661 255 aaKnown RBP30.28■■■□□ 2.44
LRRK1-206ENST00000527698 LINC00116Q8NCU8 138 aa30.28■■■□□ 2.44
LRRK1-206ENST00000527698 IFT57Q9NWB7 429 aa30.28■■■□□ 2.44
LRRK1-206ENST00000527698 TJP1Q07157 1748 aa30.27■■■□□ 2.44
LRRK1-206ENST00000527698 WDR63Q8IWG1 891 aa30.27■■■□□ 2.44
LRRK1-206ENST00000527698 IL16Q14005 1332 aa30.26■■■□□ 2.44
LRRK1-206ENST00000527698 MIS18AQ9NYP9 233 aa30.26■■■□□ 2.43
LRRK1-206ENST00000527698 KLHL34Q8N239 644 aa30.25■■■□□ 2.43
LRRK1-206ENST00000527698 GOLGB1Q14789 3259 aaKnown RBP30.24■■■□□ 2.43
LRRK1-206ENST00000527698 KCNQ3O43525 872 aa30.24■■■□□ 2.43
LRRK1-206ENST00000527698 EIF4A1P60842 406 aaKnown RBP30.24■■■□□ 2.43
LRRK1-206ENST00000527698 ZNF853P0CG23 659 aa30.23■■■□□ 2.43
LRRK1-206ENST00000527698 SSFA2P28290 1259 aa30.23■■■□□ 2.43
LRRK1-206ENST00000527698 DNAJC10Q8IXB1 793 aa30.23■■■□□ 2.43
LRRK1-206ENST00000527698 LAS1LQ9Y4W2 734 aaKnown RBP30.23■■■□□ 2.43
LRRK1-206ENST00000527698 UBR3Q6ZT12 1888 aa30.23■■■□□ 2.43
LRRK1-206ENST00000527698 CYP19A1P11511 503 aaPredicted RBP30.22■■■□□ 2.43
LRRK1-206ENST00000527698 ADRA2BP18089 450 aa30.22■■■□□ 2.43
LRRK1-206ENST00000527698 CRKLP46109 303 aaKnown RBP30.22■■■□□ 2.43
LRRK1-206ENST00000527698 COL23A1Q86Y22 540 aaPredicted RBP30.22■■■□□ 2.43
LRRK1-206ENST00000527698 RTCBQ9Y3I0 505 aaKnown RBP30.22■■■□□ 2.43
LRRK1-206ENST00000527698 CCDC87Q9NVE4 849 aa30.21■■■□□ 2.43
LRRK1-206ENST00000527698 RPS6KA4O75676 772 aa30.2■■■□□ 2.43
LRRK1-206ENST00000527698 MYH14Q7Z406 1995 aaKnown RBP30.2■■■□□ 2.43
LRRK1-206ENST00000527698 GNPATO15228 680 aa30.19■■■□□ 2.42
LRRK1-206ENST00000527698 GIGYF1O75420 1035 aaPredicted RBP30.19■■■□□ 2.42
LRRK1-206ENST00000527698 NLGN2Q8NFZ4 835 aa30.19■■■□□ 2.42
LRRK1-206ENST00000527698 CHMP4AQ9BY43 222 aa30.19■■■□□ 2.42
LRRK1-206ENST00000527698 MSH5O43196 834 aa30.17■■■□□ 2.42
LRRK1-206ENST00000527698 HOXB7P09629 217 aa30.16■■■□□ 2.42
LRRK1-206ENST00000527698 TRAPPC3LQ5T215 181 aa30.16■■■□□ 2.42
LRRK1-206ENST00000527698 MBIPQ9NS73 344 aa30.16■■■□□ 2.42
LRRK1-206ENST00000527698 SALL2Q9Y467 1007 aaPredicted RBP30.16■■■□□ 2.42
LRRK1-206ENST00000527698 LAMB4A4D0S4 1761 aa30.15■■■□□ 2.42
LRRK1-206ENST00000527698 INTS5Q6P9B9 1019 aaKnown RBP30.15■■■□□ 2.42
LRRK1-206ENST00000527698 C1QTNF8P60827 252 aa30.14■■■□□ 2.42
LRRK1-206ENST00000527698 NPM2Q86SE8 214 aaKnown RBP30.14■■■□□ 2.42
LRRK1-206ENST00000527698 PELP1Q8IZL8 1130 aaKnown RBP30.14■■■□□ 2.42
LRRK1-206ENST00000527698 SOS1Q07889 1333 aaPredicted RBP30.14■■■□□ 2.42
LRRK1-206ENST00000527698 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.13■■■□□ 2.41
LRRK1-206ENST00000527698 GRIN3BO60391 1043 aa30.13■■■□□ 2.41
LRRK1-206ENST00000527698 USP16Q9Y5T5 823 aa30.13■■■□□ 2.41
LRRK1-206ENST00000527698 MYH16Q9H6N6 1097 aa30.11■■■□□ 2.41
LRRK1-206ENST00000527698 A0A087WZG4 1122 aa30.1■■■□□ 2.41
LRRK1-206ENST00000527698 IL6STP40189 918 aaPredicted RBP30.1■■■□□ 2.41
LRRK1-206ENST00000527698 ERBB4Q15303 1308 aa30.1■■■□□ 2.41
LRRK1-206ENST00000527698 ZNF521Q96K83 1311 aa30.1■■■□□ 2.41
LRRK1-206ENST00000527698 RFC4P35249 363 aa30.09■■■□□ 2.41
LRRK1-206ENST00000527698 CD2APQ9Y5K6 639 aa30.09■■■□□ 2.41
LRRK1-206ENST00000527698 SENP3-EIF4A1A0A087X0R7 540 aa30.08■■■□□ 2.41
LRRK1-206ENST00000527698 PHF14O94880 888 aa30.08■■■□□ 2.41
LRRK1-206ENST00000527698 MSL1Q68DK7 614 aa30.08■■■□□ 2.41
LRRK1-206ENST00000527698 ZBTB1Q9Y2K1 713 aa30.08■■■□□ 2.41
LRRK1-206ENST00000527698 YBX3P16989 372 aaKnown RBP eCLIP30.07■■■□□ 2.4
LRRK1-206ENST00000527698 GOLGA2Q08379 1002 aa30.07■■■□□ 2.4
LRRK1-206ENST00000527698 ARHGEF1Q92888 912 aaKnown RBP30.07■■■□□ 2.4
LRRK1-206ENST00000527698 PRAMEF22A3QJZ6 481 aa30.06■■■□□ 2.4
LRRK1-206ENST00000527698 CANXP27824 592 aaKnown RBP30.06■■■□□ 2.4
LRRK1-206ENST00000527698 EIF5P55010 431 aaKnown RBP30.06■■■□□ 2.4
LRRK1-206ENST00000527698 A1BGP04217 495 aa30.05■■■□□ 2.4
LRRK1-206ENST00000527698 DUSP27Q5VZP5 1158 aa30.04■■■□□ 2.4
LRRK1-206ENST00000527698 COL15A1P39059 1388 aa30.03■■■□□ 2.4
LRRK1-206ENST00000527698 E9PSI1 815 aa30.03■■■□□ 2.4
LRRK1-206ENST00000527698 ZPR1O75312 459 aa30.03■■■□□ 2.4
LRRK1-206ENST00000527698 AMIGO3Q86WK7 504 aa30.02■■■□□ 2.4
LRRK1-206ENST00000527698 NLGN1Q8N2Q7 840 aa30.01■■■□□ 2.39
LRRK1-206ENST00000527698 TSR2Q969E8 191 aaKnown RBP30.01■■■□□ 2.39
LRRK1-206ENST00000527698 C4AP0C0L4 1744 aa30.01■■■□□ 2.39
LRRK1-206ENST00000527698 FANCIQ9NVI1 1328 aa30■■■□□ 2.39
LRRK1-206ENST00000527698 EIF2S2P20042 333 aaKnown RBP30■■■□□ 2.39
LRRK1-206ENST00000527698 NARFQ9UHQ1 456 aa30■■■□□ 2.39
LRRK1-206ENST00000527698 RGL2O15211 777 aa29.99■■■□□ 2.39
LRRK1-206ENST00000527698 HDGFL1Q5TGJ6 251 aa29.99■■■□□ 2.39
LRRK1-206ENST00000527698 HNRNPUQ00839 825 aaKnown RBP eCLIP29.98■■■□□ 2.39
LRRK1-206ENST00000527698 USP42Q9H9J4 1324 aaKnown RBP29.97■■■□□ 2.39
LRRK1-206ENST00000527698 DBF4Q9UBU7 674 aaPredicted RBP29.97■■■□□ 2.39
LRRK1-206ENST00000527698 NBPF26B4DH59 902 aa29.96■■■□□ 2.39
LRRK1-206ENST00000527698 KRT24Q2M2I5 525 aa29.96■■■□□ 2.39
LRRK1-206ENST00000527698 CCDC30Q5VVM6 783 aa29.96■■■□□ 2.39
LRRK1-206ENST00000527698 NBPF10Q6P3W6 841 aaKnown RBP29.96■■■□□ 2.39
LRRK1-206ENST00000527698 NBPF15Q8N660 670 aa29.96■■■□□ 2.39
LRRK1-206ENST00000527698 C8orf58Q8NAV2 365 aa29.96■■■□□ 2.39
LRRK1-206ENST00000527698 DDX21Q9NR30 783 aaKnown RBP eCLIP29.96■■■□□ 2.39
LRRK1-206ENST00000527698 TWISTNBQ3B726 338 aaPredicted RBP29.95■■■□□ 2.39
LRRK1-206ENST00000527698 ZNF330Q9Y3S2 320 aaPredicted RBP29.95■■■□□ 2.39
LRRK1-206ENST00000527698 CACNA1FO60840 1977 aa29.94■■■□□ 2.38
LRRK1-206ENST00000527698 SLFN5Q08AF3 891 aa29.94■■■□□ 2.38
LRRK1-206ENST00000527698 SMIM5Q71RC9 77 aa29.94■■■□□ 2.38
LRRK1-206ENST00000527698 GYS1P13807 737 aa29.93■■■□□ 2.38
LRRK1-206ENST00000527698 DZIP3Q86Y13 1208 aaKnown RBP29.93■■■□□ 2.38
LRRK1-206ENST00000527698 SPINK5Q9NQ38 1064 aaPredicted RBP29.93■■■□□ 2.38
LRRK1-206ENST00000527698 HYPKQ9NX55 129 aa29.93■■■□□ 2.38
LRRK1-206ENST00000527698 ELL2O00472 640 aaPredicted RBP29.92■■■□□ 2.38
LRRK1-206ENST00000527698 CLEC4GQ6UXB4 293 aa29.92■■■□□ 2.38
LRRK1-206ENST00000527698 ZNF652Q9Y2D9 606 aa29.91■■■□□ 2.38
LRRK1-206ENST00000527698 ATP10DQ9P241 1426 aa29.9■■■□□ 2.38
LRRK1-206ENST00000527698 MYL6BP14649 208 aa29.9■■■□□ 2.38
LRRK1-206ENST00000527698 EXOSC9Q06265 439 aaKnown RBP29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms