RNA–Protein interactions for RNA: ENST00000527647.5

C9orf135-205, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best) BASIC

Gene C9orf135, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-205ENST00000527647 TRMT2AQ8IZ69 625 aaKnown RBP17.62■□□□□ 0.41
C9orf135-205ENST00000527647 CCDC87Q9NVE4 849 aa17.62■□□□□ 0.41
C9orf135-205ENST00000527647 TFCP2L1Q9NZI6 479 aa17.62■□□□□ 0.41
C9orf135-205ENST00000527647 QSER1Q2KHR3 1735 aa17.61■□□□□ 0.41
C9orf135-205ENST00000527647 MYH14Q7Z406 1995 aaKnown RBP17.61■□□□□ 0.41
C9orf135-205ENST00000527647 AK7Q96M32 723 aa17.61■□□□□ 0.41
C9orf135-205ENST00000527647 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
C9orf135-205ENST00000527647 RTCBQ9Y3I0 505 aaKnown RBP17.61■□□□□ 0.41
C9orf135-205ENST00000527647 ERBB4Q15303 1308 aa17.61■□□□□ 0.41
C9orf135-205ENST00000527647 IL6STP40189 918 aaPredicted RBP17.6■□□□□ 0.41
C9orf135-205ENST00000527647 EIF5P55010 431 aaKnown RBP17.6■□□□□ 0.41
C9orf135-205ENST00000527647 SLFN5Q08AF3 891 aa17.6■□□□□ 0.41
C9orf135-205ENST00000527647 TRAPPC3LQ5T215 181 aa17.6■□□□□ 0.41
C9orf135-205ENST00000527647 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
C9orf135-205ENST00000527647 PNPLA7Q6ZV29 1317 aa17.59■□□□□ 0.41
C9orf135-205ENST00000527647 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
C9orf135-205ENST00000527647 E9PSI1 815 aa17.59■□□□□ 0.41
C9orf135-205ENST00000527647 R3HDM1Q15032 1099 aaKnown RBP17.59■□□□□ 0.41
C9orf135-205ENST00000527647 SENP3-EIF4A1A0A087X0R7 540 aa17.58■□□□□ 0.4
C9orf135-205ENST00000527647 GNPATO15228 680 aa17.58■□□□□ 0.4
C9orf135-205ENST00000527647 COL23A1Q86Y22 540 aaPredicted RBP17.58■□□□□ 0.4
C9orf135-205ENST00000527647 UBR3Q6ZT12 1888 aa17.57■□□□□ 0.4
C9orf135-205ENST00000527647 RGL2O15211 777 aa17.57■□□□□ 0.4
C9orf135-205ENST00000527647 A1BGP04217 495 aa17.57■□□□□ 0.4
C9orf135-205ENST00000527647 DUSP27Q5VZP5 1158 aa17.57■□□□□ 0.4
C9orf135-205ENST00000527647 C8orf58Q8NAV2 365 aa17.57■□□□□ 0.4
C9orf135-205ENST00000527647 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
C9orf135-205ENST00000527647 ZBTB1Q9Y2K1 713 aa17.57■□□□□ 0.4
C9orf135-205ENST00000527647 A0A087WZG4 1122 aa17.56■□□□□ 0.4
C9orf135-205ENST00000527647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.56■□□□□ 0.4
C9orf135-205ENST00000527647 FANCIQ9NVI1 1328 aa17.55■□□□□ 0.4
C9orf135-205ENST00000527647 NBPF26B4DH59 902 aa17.55■□□□□ 0.4
C9orf135-205ENST00000527647 HNRNPUQ00839 825 aaKnown RBP eCLIP17.55■□□□□ 0.4
C9orf135-205ENST00000527647 PDIA6Q15084 440 aa17.55■□□□□ 0.4
C9orf135-205ENST00000527647 NBPF10Q6P3W6 841 aaKnown RBP17.55■□□□□ 0.4
C9orf135-205ENST00000527647 AMIGO3Q86WK7 504 aa17.55■□□□□ 0.4
C9orf135-205ENST00000527647 NBPF15Q8N660 670 aa17.55■□□□□ 0.4
C9orf135-205ENST00000527647 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
C9orf135-205ENST00000527647 ZBED9Q6R2W3 1325 aa17.54■□□□□ 0.4
C9orf135-205ENST00000527647 VAMP4O75379 141 aa17.54■□□□□ 0.4
C9orf135-205ENST00000527647 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
C9orf135-205ENST00000527647 DDX21Q9NR30 783 aaKnown RBP eCLIP17.54■□□□□ 0.4
C9orf135-205ENST00000527647 PSDA5PKW4 1024 aaPredicted RBP17.53■□□□□ 0.4
C9orf135-205ENST00000527647 CANXP27824 592 aaKnown RBP17.53■□□□□ 0.4
C9orf135-205ENST00000527647 TWISTNBQ3B726 338 aaPredicted RBP17.53■□□□□ 0.4
C9orf135-205ENST00000527647 LRP10Q7Z4F1 713 aa17.53■□□□□ 0.4
C9orf135-205ENST00000527647 TSPYL6Q8N831 410 aa17.53■□□□□ 0.4
C9orf135-205ENST00000527647 DBF4Q9UBU7 674 aaPredicted RBP17.53■□□□□ 0.4
C9orf135-205ENST00000527647 NARFQ9UHQ1 456 aa17.53■□□□□ 0.4
C9orf135-205ENST00000527647 CT47B1P0C2W7 299 aaPredicted RBP17.52■□□□□ 0.4
C9orf135-205ENST00000527647 EIF2S2P20042 333 aaKnown RBP17.52■□□□□ 0.4
C9orf135-205ENST00000527647 RFC4P35249 363 aa17.52■□□□□ 0.4
C9orf135-205ENST00000527647 EXOSC9Q06265 439 aaKnown RBP17.52■□□□□ 0.4
C9orf135-205ENST00000527647 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
C9orf135-205ENST00000527647 NLGN1Q8N2Q7 840 aa17.52■□□□□ 0.4
C9orf135-205ENST00000527647 ZNF428Q96B54 188 aa17.52■□□□□ 0.4
C9orf135-205ENST00000527647 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.4
C9orf135-205ENST00000527647 MTFR1LQ9H019 292 aa17.52■□□□□ 0.4
C9orf135-205ENST00000527647 LAMB4A4D0S4 1761 aa17.51■□□□□ 0.39
C9orf135-205ENST00000527647 CASZ1Q86V15 1759 aa17.51■□□□□ 0.39
C9orf135-205ENST00000527647 PDGFDQ9GZP0 370 aaPredicted RBP17.51■□□□□ 0.39
C9orf135-205ENST00000527647 TUBGCP6Q96RT7 1819 aa17.51■□□□□ 0.39
C9orf135-205ENST00000527647 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
C9orf135-205ENST00000527647 CLEC4GQ6UXB4 293 aa17.5■□□□□ 0.39
C9orf135-205ENST00000527647 NPM2Q86SE8 214 aaKnown RBP17.5■□□□□ 0.39
C9orf135-205ENST00000527647 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
C9orf135-205ENST00000527647 ERVV-1B6SEH8 477 aa17.49■□□□□ 0.39
C9orf135-205ENST00000527647 ELL2O00472 640 aaPredicted RBP17.49■□□□□ 0.39
C9orf135-205ENST00000527647 COL15A1P39059 1388 aa17.49■□□□□ 0.39
C9orf135-205ENST00000527647 COL24A1Q17RW2 1714 aa17.49■□□□□ 0.39
C9orf135-205ENST00000527647 USP42Q9H9J4 1324 aaKnown RBP17.48■□□□□ 0.39
C9orf135-205ENST00000527647 ZPR1O75312 459 aa17.48■□□□□ 0.39
C9orf135-205ENST00000527647 PHF14O94880 888 aa17.48■□□□□ 0.39
C9orf135-205ENST00000527647 GYS1P13807 737 aa17.48■□□□□ 0.39
C9orf135-205ENST00000527647 SMIM5Q71RC9 77 aa17.48■□□□□ 0.39
C9orf135-205ENST00000527647 SGIP1Q9BQI5 828 aa17.48■□□□□ 0.39
C9orf135-205ENST00000527647 SPON1Q9HCB6 807 aa17.48■□□□□ 0.39
C9orf135-205ENST00000527647 TM4SF1P30408 202 aa17.47■□□□□ 0.39
C9orf135-205ENST00000527647 DZIP3Q86Y13 1208 aaKnown RBP17.47■□□□□ 0.39
C9orf135-205ENST00000527647 CACNA1FO60840 1977 aa17.46■□□□□ 0.39
C9orf135-205ENST00000527647 MSH5O43196 834 aa17.46■□□□□ 0.39
C9orf135-205ENST00000527647 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
C9orf135-205ENST00000527647 CHPF2Q9P2E5 772 aa17.46■□□□□ 0.39
C9orf135-205ENST00000527647 CAMTA2O94983 1202 aa17.45■□□□□ 0.38
C9orf135-205ENST00000527647 PTGER2P43116 358 aa17.45■□□□□ 0.38
C9orf135-205ENST00000527647 USPL1Q5W0Q7 1092 aa17.45■□□□□ 0.38
C9orf135-205ENST00000527647 TBC1D2BQ9UPU7 963 aa17.45■□□□□ 0.38
C9orf135-205ENST00000527647 MYL6BP14649 208 aa17.44■□□□□ 0.38
C9orf135-205ENST00000527647 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
C9orf135-205ENST00000527647 PROSER3Q2NL68 480 aa17.44■□□□□ 0.38
C9orf135-205ENST00000527647 ALDH1L2Q3SY69 923 aa17.44■□□□□ 0.38
C9orf135-205ENST00000527647 COPS6Q7L5N1 327 aa17.44■□□□□ 0.38
C9orf135-205ENST00000527647 STK31Q9BXU1 1019 aa17.44■□□□□ 0.38
C9orf135-205ENST00000527647 MAP3K15Q6ZN16 1313 aa17.44■□□□□ 0.38
C9orf135-205ENST00000527647 ZBTB7AO95365 584 aa17.43■□□□□ 0.38
C9orf135-205ENST00000527647 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
C9orf135-205ENST00000527647 BRPF1P55201 1214 aaPredicted RBP17.43■□□□□ 0.38
C9orf135-205ENST00000527647 SRP68Q9UHB9 627 aaKnown RBP17.43■□□□□ 0.38
C9orf135-205ENST00000527647 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
C9orf135-205ENST00000527647 FKBP8Q14318 412 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms