RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 TNS4Q8IZW8 715 aa8.45□□□□□ -1.06
NXF1-205ENST00000527497 GJD3Q8N144 294 aa8.45□□□□□ -1.06
NXF1-205ENST00000527497 CHMP7Q8WUX9 453 aaPredicted RBP8.45□□□□□ -1.06
NXF1-205ENST00000527497 MRFAP1L1Q96HT8 127 aa8.45□□□□□ -1.06
NXF1-205ENST00000527497 SPSB2Q99619 263 aa8.45□□□□□ -1.06
NXF1-205ENST00000527497 NOP58Q9Y2X3 529 aaKnown RBP8.45□□□□□ -1.06
NXF1-205ENST00000527497 PCDHGB7Q9Y5F8 929 aa8.45□□□□□ -1.06
NXF1-205ENST00000527497 BHMG1C9JSJ3 638 aaPredicted RBP8.44□□□□□ -1.06
NXF1-205ENST00000527497 ZBTB24O43167 697 aaPredicted RBP8.44□□□□□ -1.06
NXF1-205ENST00000527497 CTSHP09668 335 aa8.44□□□□□ -1.06
NXF1-205ENST00000527497 HS2ST1Q7LGA3 356 aa8.44□□□□□ -1.06
NXF1-205ENST00000527497 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
NXF1-205ENST00000527497 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.44□□□□□ -1.062e-10■■■■□ 20.7
NXF1-205ENST00000527497 TSPAN10Q9H1Z9 355 aaPredicted RBP8.44□□□□□ -1.06
NXF1-205ENST00000527497 SRA1Q9HD15 236 aaKnown RBP8.44□□□□□ -1.06
NXF1-205ENST00000527497 PPME1Q9Y570 386 aa8.44□□□□□ -1.06
NXF1-205ENST00000527497 PPP1R12BO60237 982 aaPredicted RBP8.43□□□□□ -1.06
NXF1-205ENST00000527497 POTEIP0CG38 1075 aa8.43□□□□□ -1.06
NXF1-205ENST00000527497 XRCC5P13010 732 aaKnown RBP8.43□□□□□ -1.06
NXF1-205ENST00000527497 GJA8P48165 433 aa8.43□□□□□ -1.06
NXF1-205ENST00000527497 APLP1P51693 650 aa8.43□□□□□ -1.06
NXF1-205ENST00000527497 EPHA4P54764 986 aa8.43□□□□□ -1.06
NXF1-205ENST00000527497 NBPF6Q5VWK0 638 aa8.43□□□□□ -1.06
NXF1-205ENST00000527497 NBPF4Q96M43 638 aa8.43□□□□□ -1.06
NXF1-205ENST00000527497 C1QTNF2Q9BXJ5 285 aa8.43□□□□□ -1.06
NXF1-205ENST00000527497 CFHR5Q9BXR6 569 aa8.43□□□□□ -1.06
NXF1-205ENST00000527497 ESF1Q9H501 851 aaKnown RBP8.43□□□□□ -1.06
NXF1-205ENST00000527497 DMGDHQ9UI17 866 aaKnown RBP8.43□□□□□ -1.06
NXF1-205ENST00000527497 SPG7Q9UQ90 795 aa8.43□□□□□ -1.06
NXF1-205ENST00000527497 SNPHO15079 494 aa8.42□□□□□ -1.06
NXF1-205ENST00000527497 GDF10P55107 478 aa8.42□□□□□ -1.06
NXF1-205ENST00000527497 PPP4CP60510 307 aa8.42□□□□□ -1.06
NXF1-205ENST00000527497 PTCRAQ6ISU1 281 aaPredicted RBP8.42□□□□□ -1.06
NXF1-205ENST00000527497 CKAP2LQ8IYA6 745 aa8.42□□□□□ -1.06
NXF1-205ENST00000527497 CSRNP1Q96S65 589 aa8.42□□□□□ -1.06
NXF1-205ENST00000527497 PRDM9Q9NQV7 894 aa8.42□□□□□ -1.06
NXF1-205ENST00000527497 MRPL42Q9Y6G3 142 aaKnown RBP8.42□□□□□ -1.06
NXF1-205ENST00000527497 A0A1W2PRU2 124 aa8.41□□□□□ -1.06
NXF1-205ENST00000527497 ATF4P18848 351 aaPredicted RBP8.41□□□□□ -1.06
NXF1-205ENST00000527497 EIF4BP23588 611 aaKnown RBP8.41□□□□□ -1.06
NXF1-205ENST00000527497 MZF1P28698 734 aaPredicted RBP8.41□□□□□ -1.06
NXF1-205ENST00000527497 PBX2P40425 430 aa8.41□□□□□ -1.06
NXF1-205ENST00000527497 SCNN1DP51172 638 aa8.41□□□□□ -1.06
NXF1-205ENST00000527497 TRMT44Q8IYL2 757 aaKnown RBP8.41□□□□□ -1.06
NXF1-205ENST00000527497 CCDC24Q8N4L8 307 aa8.41□□□□□ -1.06
NXF1-205ENST00000527497 MRPL50Q8N5N7 158 aaKnown RBP8.41□□□□□ -1.06
NXF1-205ENST00000527497 MYO19Q96H55 970 aa8.41□□□□□ -1.06
NXF1-205ENST00000527497 KLHL42Q9P2K6 505 aa8.41□□□□□ -1.06
NXF1-205ENST00000527497 POLIQ9UNA4 740 aa8.41□□□□□ -1.06
NXF1-205ENST00000527497 PLEKHD1A6NEE1 506 aa8.4□□□□□ -1.06
NXF1-205ENST00000527497 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.06
NXF1-205ENST00000527497 POTEEQ6S8J3 1075 aa8.4□□□□□ -1.06
NXF1-205ENST00000527497 FOXJ1Q92949 421 aa8.4□□□□□ -1.06
NXF1-205ENST00000527497 C2orf49Q9BVC5 232 aaPredicted RBP8.4□□□□□ -1.06
NXF1-205ENST00000527497 GGT7Q9UJ14 662 aa8.4□□□□□ -1.06
NXF1-205ENST00000527497 K7ELQ4 463 aaPredicted RBP8.39□□□□□ -1.07
NXF1-205ENST00000527497 ENPP3O14638 875 aa8.39□□□□□ -1.07
NXF1-205ENST00000527497 INHAP05111 366 aa8.39□□□□□ -1.07
NXF1-205ENST00000527497 NEFLP07196 543 aa8.39□□□□□ -1.07
NXF1-205ENST00000527497 SCTRP47872 440 aa8.39□□□□□ -1.07
NXF1-205ENST00000527497 CC2D2BQ6DHV5 1058 aa8.39□□□□□ -1.07
NXF1-205ENST00000527497 ZNF511Q8NB15 262 aa8.39□□□□□ -1.07
NXF1-205ENST00000527497 BAP1Q92560 729 aa8.39□□□□□ -1.07
NXF1-205ENST00000527497 MKL1Q969V6 931 aa8.39□□□□□ -1.07
NXF1-205ENST00000527497 TRIM52Q96A61 297 aa8.39□□□□□ -1.07
NXF1-205ENST00000527497 ZBTB39O15060 712 aa8.38□□□□□ -1.07
NXF1-205ENST00000527497 ERVK-9P63128 1117 aa8.38□□□□□ -1.07
NXF1-205ENST00000527497 ATCAYQ86WG3 371 aa8.38□□□□□ -1.07
NXF1-205ENST00000527497 GPRASP2Q96D09 838 aa8.38□□□□□ -1.07
NXF1-205ENST00000527497 SLC4A9Q96Q91 983 aa8.38□□□□□ -1.07
NXF1-205ENST00000527497 DNAJC25Q9H1X3 360 aa8.38□□□□□ -1.07
NXF1-205ENST00000527497 QTRT2Q9H974 415 aaKnown RBP8.38□□□□□ -1.07
NXF1-205ENST00000527497 SUGT1Q9Y2Z0 365 aa8.38□□□□□ -1.07
NXF1-205ENST00000527497 COL4A3BPQ9Y5P4 624 aa8.38□□□□□ -1.07
NXF1-205ENST00000527497 RAB15P59190 212 aa8.37□□□□□ -1.07
NXF1-205ENST00000527497 PSMA6P60900 246 aaKnown RBP8.37□□□□□ -1.07
NXF1-205ENST00000527497 FOXK2Q01167 660 aa8.37□□□□□ -1.07
NXF1-205ENST00000527497 PAK2Q13177 524 aa8.37□□□□□ -1.07
NXF1-205ENST00000527497 SERINC3Q13530 473 aa8.37□□□□□ -1.07
NXF1-205ENST00000527497 KCTD15Q96SI1 283 aaPredicted RBP8.37□□□□□ -1.07
NXF1-205ENST00000527497 SERTAD1Q9UHV2 236 aa8.37□□□□□ -1.07
NXF1-205ENST00000527497 LRFN2Q9ULH4 789 aa8.37□□□□□ -1.07
NXF1-205ENST00000527497 HPS5Q9UPZ3 1129 aa8.37□□□□□ -1.07
NXF1-205ENST00000527497 AXIN2Q9Y2T1 843 aa8.37□□□□□ -1.07
NXF1-205ENST00000527497 USP31Q70CQ4 1352 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
NXF1-205ENST00000527497 GIPC1O14908 333 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 PDGFAP04085 211 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 DNM1Q05193 864 aaKnown RBP8.36□□□□□ -1.07
NXF1-205ENST00000527497 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 SLC9A9Q8IVB4 645 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 ANKK1Q8NFD2 765 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 EDEM1Q92611 657 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 SCUBE2Q9NQ36 999 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 SCHIP1Q9P0W5 487 aaPredicted RBP8.36□□□□□ -1.07
NXF1-205ENST00000527497 TSR3Q9UJK0 312 aaKnown RBP8.36□□□□□ -1.07
NXF1-205ENST00000527497 CHMP3Q9Y3E7 222 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 RIPOR2Q9Y4F9 1068 aa8.36□□□□□ -1.07
NXF1-205ENST00000527497 TK2O00142 265 aa8.35□□□□□ -1.07
NXF1-205ENST00000527497 PCSK2P16519 638 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms