RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 INTS5Q6P9B9 1019 aaKnown RBP21.68■■□□□ 1.06
SMCO4-204ENST00000527149 TSR2Q969E8 191 aaKnown RBP21.68■■□□□ 1.06
SMCO4-204ENST00000527149 PNPLA7Q6ZV29 1317 aa21.67■■□□□ 1.06
SMCO4-204ENST00000527149 FANCIQ9NVI1 1328 aa21.67■■□□□ 1.06
SMCO4-204ENST00000527149 HMGB2P26583 209 aaKnown RBP21.67■■□□□ 1.06
SMCO4-204ENST00000527149 USP16Q9Y5T5 823 aa21.67■■□□□ 1.06
SMCO4-204ENST00000527149 TEX13AQ9BXU3 409 aaPredicted RBP21.66■■□□□ 1.06
SMCO4-204ENST00000527149 CCDC87Q9NVE4 849 aa21.66■■□□□ 1.06
SMCO4-204ENST00000527149 ZBTB1Q9Y2K1 713 aa21.66■■□□□ 1.06
SMCO4-204ENST00000527149 PSDA5PKW4 1024 aaPredicted RBP21.65■■□□□ 1.06
SMCO4-204ENST00000527149 GNPATO15228 680 aa21.65■■□□□ 1.06
SMCO4-204ENST00000527149 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
SMCO4-204ENST00000527149 AK7Q96M32 723 aa21.65■■□□□ 1.06
SMCO4-204ENST00000527149 STARD3NLO95772 234 aa21.64■■□□□ 1.05
SMCO4-204ENST00000527149 SMIM5Q71RC9 77 aa21.64■■□□□ 1.05
SMCO4-204ENST00000527149 PDGFDQ9GZP0 370 aaPredicted RBP21.64■■□□□ 1.05
SMCO4-204ENST00000527149 SOS1Q07889 1333 aaPredicted RBP21.63■■□□□ 1.05
SMCO4-204ENST00000527149 TFCP2L1Q9NZI6 479 aa21.63■■□□□ 1.05
SMCO4-204ENST00000527149 RPS6KA4O75676 772 aa21.62■■□□□ 1.05
SMCO4-204ENST00000527149 A1BGP04217 495 aa21.62■■□□□ 1.05
SMCO4-204ENST00000527149 HOXB7P09629 217 aa21.62■■□□□ 1.05
SMCO4-204ENST00000527149 SSFA2P28290 1259 aa21.62■■□□□ 1.05
SMCO4-204ENST00000527149 GOLGA2Q08379 1002 aa21.62■■□□□ 1.05
SMCO4-204ENST00000527149 C8orf58Q8NAV2 365 aa21.62■■□□□ 1.05
SMCO4-204ENST00000527149 COL24A1Q17RW2 1714 aa21.61■■□□□ 1.05
SMCO4-204ENST00000527149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.61■■□□□ 1.05
SMCO4-204ENST00000527149 ZBED9Q6R2W3 1325 aa21.6■■□□□ 1.05
SMCO4-204ENST00000527149 NBPF26B4DH59 902 aa21.6■■□□□ 1.05
SMCO4-204ENST00000527149 SLFN5Q08AF3 891 aa21.6■■□□□ 1.05
SMCO4-204ENST00000527149 DUSP27Q5VZP5 1158 aa21.6■■□□□ 1.05
SMCO4-204ENST00000527149 NBPF10Q6P3W6 841 aaKnown RBP21.6■■□□□ 1.05
SMCO4-204ENST00000527149 COL23A1Q86Y22 540 aaPredicted RBP21.6■■□□□ 1.05
SMCO4-204ENST00000527149 NBPF15Q8N660 670 aa21.6■■□□□ 1.05
SMCO4-204ENST00000527149 TSPYL6Q8N831 410 aa21.6■■□□□ 1.05
SMCO4-204ENST00000527149 CDCA7LQ96GN5 454 aa21.6■■□□□ 1.05
SMCO4-204ENST00000527149 E9PSI1 815 aa21.59■■□□□ 1.05
SMCO4-204ENST00000527149 ADRA2BP18089 450 aa21.59■■□□□ 1.05
SMCO4-204ENST00000527149 EIF5P55010 431 aaKnown RBP21.59■■□□□ 1.05
SMCO4-204ENST00000527149 TRMT2AQ8IZ69 625 aaKnown RBP21.59■■□□□ 1.05
SMCO4-204ENST00000527149 MYH16Q9H6N6 1097 aa21.59■■□□□ 1.05
SMCO4-204ENST00000527149 RTCBQ9Y3I0 505 aaKnown RBP21.59■■□□□ 1.05
SMCO4-204ENST00000527149 SCN7AQ01118 1682 aa21.59■■□□□ 1.05
SMCO4-204ENST00000527149 COL15A1P39059 1388 aa21.59■■□□□ 1.05
SMCO4-204ENST00000527149 PHF14O94880 888 aa21.58■■□□□ 1.05
SMCO4-204ENST00000527149 PIP4K2AP48426 406 aaPredicted RBP21.58■■□□□ 1.05
SMCO4-204ENST00000527149 ERBB4Q15303 1308 aa21.57■■□□□ 1.04
SMCO4-204ENST00000527149 BCORQ6W2J9 1755 aa21.57■■□□□ 1.04
SMCO4-204ENST00000527149 IL6STP40189 918 aaPredicted RBP21.57■■□□□ 1.04
SMCO4-204ENST00000527149 LRP10Q7Z4F1 713 aa21.57■■□□□ 1.04
SMCO4-204ENST00000527149 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
SMCO4-204ENST00000527149 EXOSC9Q06265 439 aaKnown RBP21.56■■□□□ 1.04
SMCO4-204ENST00000527149 PDIA6Q15084 440 aa21.56■■□□□ 1.04
SMCO4-204ENST00000527149 FLAD1Q8NFF5 587 aa21.56■■□□□ 1.04
SMCO4-204ENST00000527149 ELL2O00472 640 aaPredicted RBP21.55■■□□□ 1.04
SMCO4-204ENST00000527149 PROSER3Q2NL68 480 aa21.55■■□□□ 1.04
SMCO4-204ENST00000527149 ARHGEF1Q92888 912 aaKnown RBP21.55■■□□□ 1.04
SMCO4-204ENST00000527149 EIF2S2P20042 333 aaKnown RBP21.54■■□□□ 1.04
SMCO4-204ENST00000527149 HDGFL1Q5TGJ6 251 aa21.54■■□□□ 1.04
SMCO4-204ENST00000527149 TWISTNBQ3B726 338 aaPredicted RBP21.53■■□□□ 1.04
SMCO4-204ENST00000527149 TRAPPC3LQ5T215 181 aa21.53■■□□□ 1.04
SMCO4-204ENST00000527149 USP42Q9H9J4 1324 aaKnown RBP21.53■■□□□ 1.04
SMCO4-204ENST00000527149 NECTIN2Q92692 538 aa21.52■■□□□ 1.04
SMCO4-204ENST00000527149 CHPF2Q9P2E5 772 aa21.52■■□□□ 1.04
SMCO4-204ENST00000527149 ANXA1P04083 346 aa21.51■■□□□ 1.03
SMCO4-204ENST00000527149 SLC16A10Q8TF71 515 aa21.51■■□□□ 1.03
SMCO4-204ENST00000527149 DDX21Q9NR30 783 aaKnown RBP eCLIP21.51■■□□□ 1.03
SMCO4-204ENST00000527149 SRP68Q9UHB9 627 aaKnown RBP21.51■■□□□ 1.03
SMCO4-204ENST00000527149 LRP5O75197 1615 aa21.51■■□□□ 1.03
SMCO4-204ENST00000527149 VAMP4O75379 141 aa21.5■■□□□ 1.03
SMCO4-204ENST00000527149 CACNA1FO60840 1977 aa21.5■■□□□ 1.03
SMCO4-204ENST00000527149 ZBTB7AO95365 584 aa21.49■■□□□ 1.03
SMCO4-204ENST00000527149 MTFR1LQ9H019 292 aa21.49■■□□□ 1.03
SMCO4-204ENST00000527149 NARFQ9UHQ1 456 aa21.49■■□□□ 1.03
SMCO4-204ENST00000527149 GYS1P13807 737 aa21.48■■□□□ 1.03
SMCO4-204ENST00000527149 RFC4P35249 363 aa21.48■■□□□ 1.03
SMCO4-204ENST00000527149 SGIP1Q9BQI5 828 aa21.48■■□□□ 1.03
SMCO4-204ENST00000527149 BCL2L12Q9HB09 334 aa21.48■■□□□ 1.03
SMCO4-204ENST00000527149 A0A087WZG4 1122 aa21.47■■□□□ 1.03
SMCO4-204ENST00000527149 CAMTA2O94983 1202 aa21.47■■□□□ 1.03
SMCO4-204ENST00000527149 MYL6BP14649 208 aa21.47■■□□□ 1.03
SMCO4-204ENST00000527149 DBF4Q9UBU7 674 aaPredicted RBP21.47■■□□□ 1.03
SMCO4-204ENST00000527149 ZNF330Q9Y3S2 320 aaPredicted RBP21.47■■□□□ 1.03
SMCO4-204ENST00000527149 MSH5O43196 834 aa21.46■■□□□ 1.03
SMCO4-204ENST00000527149 PTGER2P43116 358 aa21.46■■□□□ 1.03
SMCO4-204ENST00000527149 CCDC30Q5VVM6 783 aa21.46■■□□□ 1.03
SMCO4-204ENST00000527149 TTLL7Q6ZT98 887 aa21.46■■□□□ 1.03
SMCO4-204ENST00000527149 DZIP3Q86Y13 1208 aaKnown RBP21.46■■□□□ 1.03
SMCO4-204ENST00000527149 TBC1D2BQ9UPU7 963 aa21.46■■□□□ 1.03
SMCO4-204ENST00000527149 USPL1Q5W0Q7 1092 aa21.45■■□□□ 1.02
SMCO4-204ENST00000527149 MSL1Q68DK7 614 aa21.45■■□□□ 1.02
SMCO4-204ENST00000527149 NUP98P52948 1817 aa21.45■■□□□ 1.02
SMCO4-204ENST00000527149 FKBP8Q14318 412 aa21.44■■□□□ 1.02
SMCO4-204ENST00000527149 TCERG1O14776 1098 aaKnown RBP21.43■■□□□ 1.02
SMCO4-204ENST00000527149 RGL2O15211 777 aa21.43■■□□□ 1.02
SMCO4-204ENST00000527149 XAGE3Q8WTP9 111 aa21.43■■□□□ 1.02
SMCO4-204ENST00000527149 CHMP4AQ9BY43 222 aa21.43■■□□□ 1.02
SMCO4-204ENST00000527149 HYPKQ9NX55 129 aa21.43■■□□□ 1.02
SMCO4-204ENST00000527149 ATF5Q9Y2D1 282 aaPredicted RBP21.43■■□□□ 1.02
SMCO4-204ENST00000527149 ARFGEF2Q9Y6D5 1785 aa21.43■■□□□ 1.02
SMCO4-204ENST00000527149 ZPR1O75312 459 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms