RNA–Protein interactions for RNA: ENST00000526664.5

PDE4DIP-223, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-223	ENST00000526664	ARX	Q96QS3	562 aa		12.86	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	SYT17	Q9BSW7	474 aa		12.86	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.86	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	NEFM	P07197	916 aa		12.85	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	EIF5	P55010	431 aa	Known RBP	12.85	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	EIF4A1	P60842	406 aa	Known RBP	12.85	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	BCL2L12	Q9HB09	334 aa		12.85	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	USP42	Q9H9J4	1324 aa	Known RBP	12.85	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	APAF1	O14727	1248 aa		12.84	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.84	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	SRP68	Q9UHB9	627 aa	Known RBP	12.84	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	LAMB4	A4D0S4	1761 aa		12.84	□□□□□ -0.35
PDE4DIP-223	ENST00000526664	COL15A1	P39059	1388 aa		12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	NBPF26	B4DH59	902 aa		12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	CHL1	O00533	1208 aa		12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	MSH5	O43196	834 aa		12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	GIGYF1	O75420	1035 aa	Predicted RBP	12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	A1BG	P04217	495 aa		12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	SNRPA1	P09661	255 aa	Known RBP	12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	NEUROD2	Q15784	382 aa		12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	NBPF10	Q6P3W6	841 aa	Known RBP	12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	NBPF15	Q8N660	670 aa		12.83	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	KIAA1551	Q9HCM1	1747 aa		12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	STARD3NL	O95772	234 aa		12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	ZNF853	P0CG23	659 aa		12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	FKBP8	Q14318	412 aa		12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	MRS2	Q9HD23	443 aa		12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	BABAM1	Q9NWV8	329 aa		12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	NARF	Q9UHQ1	456 aa		12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	KIF13B	Q9NQT8	1826 aa		12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	UTRN	P46939	3433 aa		12.82	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	CANX	P27824	592 aa	Known RBP	12.81	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	POLD1	P28340	1107 aa		12.81	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	TM4SF1	P30408	202 aa		12.81	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	IL6ST	P40189	918 aa	Predicted RBP	12.81	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	NLGN2	Q8NFZ4	835 aa		12.81	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	SCN7A	Q01118	1682 aa		12.8	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	NRXN2	Q9P2S2	1712 aa		12.8	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	GOLGB1	Q14789	3259 aa	Known RBP	12.8	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	RFC4	P35249	363 aa		12.8	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	PIP4K2A	P48426	406 aa	Predicted RBP	12.8	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	DDR1	Q08345	913 aa		12.8	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	LMOD3	Q0VAK6	560 aa		12.8	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	LRP10	Q7Z4F1	713 aa		12.8	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	NLGN1	Q8N2Q7	840 aa		12.8	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	BCOR	Q6W2J9	1755 aa		12.79	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	MMP10	P09238	476 aa		12.79	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	NCBP3	Q53F19	620 aa	Known RBP	12.79	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	USPL1	Q5W0Q7	1092 aa		12.79	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	AFDN	P55196	1824 aa	Known RBP	12.78	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	CAMTA2	O94983	1202 aa		12.78	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	PDIA6	Q15084	440 aa		12.78	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	CCDC27	Q2M243	656 aa		12.78	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	KRT24	Q2M2I5	525 aa		12.78	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	CFAP44	Q96MT7	982 aa		12.78	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	TSPYL4	Q9UJ04	414 aa		12.78	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	CD2AP	Q9Y5K6	639 aa		12.78	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	C10orf71	Q711Q0	1435 aa		12.78	□□□□□ -0.36
PDE4DIP-223	ENST00000526664	POLRMT	O00411	1230 aa	Known RBP	12.77	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	SENP3-EIF4A1	A0A087X0R7	540 aa		12.76	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	NFIX	Q14938	502 aa		12.76	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	WWC1	Q8IX03	1113 aa		12.76	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	MBIP	Q9NS73	344 aa		12.76	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	TBC1D2B	Q9UPU7	963 aa		12.76	□□□□□ -0.37
PDE4DIP-223	ENST00000526664		A0A087WZG4	1122 aa		12.75	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	ZPR1	O75312	459 aa		12.75	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	IFT57	Q9NWB7	429 aa		12.75	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	BRCA1	P38398	1863 aa	Known RBP	12.74	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	PXDNL	A1KZ92	1463 aa		12.74	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	PROSER3	Q2NL68	480 aa		12.74	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	TBC1D9B	Q66K14	1250 aa		12.74	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	ERBB4	Q15303	1308 aa		12.73	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	KCNA3	P22001	575 aa		12.73	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	DZIP3	Q86Y13	1208 aa	Known RBP	12.73	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.73	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	ANKRD31	Q8N7Z5	1873 aa		12.72	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	NUP98	P52948	1817 aa		12.72	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	ZNF521	Q96K83	1311 aa		12.72	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	RGL2	O15211	777 aa		12.72	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	YBX3	P16989	372 aa	Known RBP eCLIP	12.72	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	HLF	Q16534	295 aa		12.72	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	TTLL7	Q6ZT98	887 aa		12.72	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	FAM9B	Q8IZU0	186 aa		12.72	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	CARMIL3	Q8ND23	1372 aa		12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	CCER2	I3L3R5	266 aa		12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	ANXA1	P04083	346 aa		12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	HOXB7	P09629	217 aa		12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	GNAI1	P63096	354 aa		12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	CLEC4G	Q6UXB4	293 aa		12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	KLHL34	Q8N239	644 aa		12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	LAS1L	Q9Y4W2	734 aa	Known RBP	12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	PARP3	Q9Y6F1	533 aa		12.71	□□□□□ -0.37
PDE4DIP-223	ENST00000526664	IL16	Q14005	1332 aa		12.7	□□□□□ -0.38
PDE4DIP-223	ENST00000526664	SERPINB2	P05120	415 aa		12.7	□□□□□ -0.38
PDE4DIP-223	ENST00000526664	TGFB2	P61812	414 aa		12.7	□□□□□ -0.38
PDE4DIP-223	ENST00000526664	DUSP27	Q5VZP5	1158 aa		12.7	□□□□□ -0.38
PDE4DIP-223	ENST00000526664	C8orf58	Q8NAV2	365 aa		12.7	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms