RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 RTCBQ9Y3I0 505 aaKnown RBP22.58■■□□□ 1.21
PKP3-203ENST00000525642 SNRPA1P09661 255 aaKnown RBP22.57■■□□□ 1.2
PKP3-203ENST00000525642 PTGER2P43116 358 aa22.57■■□□□ 1.2
PKP3-203ENST00000525642 ZBTB7AO95365 584 aa22.56■■□□□ 1.2
PKP3-203ENST00000525642 STARD3NLO95772 234 aa22.56■■□□□ 1.2
PKP3-203ENST00000525642 SMIM5Q71RC9 77 aa22.56■■□□□ 1.2
PKP3-203ENST00000525642 CFAP44Q96MT7 982 aa22.56■■□□□ 1.2
PKP3-203ENST00000525642 USP16Q9Y5T5 823 aa22.56■■□□□ 1.2
PKP3-203ENST00000525642 SOS1Q07889 1333 aaPredicted RBP22.56■■□□□ 1.2
PKP3-203ENST00000525642 C4AP0C0L4 1744 aa22.55■■□□□ 1.2
PKP3-203ENST00000525642 PRAMEF22A3QJZ6 481 aa22.55■■□□□ 1.2
PKP3-203ENST00000525642 GIGYF1O75420 1035 aaPredicted RBP22.55■■□□□ 1.2
PKP3-203ENST00000525642 MIER1Q8N108 512 aa22.55■■□□□ 1.2
PKP3-203ENST00000525642 ARHGEF1Q92888 912 aaKnown RBP22.55■■□□□ 1.2
PKP3-203ENST00000525642 TSPYL4Q9UJ04 414 aa22.55■■□□□ 1.2
PKP3-203ENST00000525642 ZBTB1Q9Y2K1 713 aa22.55■■□□□ 1.2
PKP3-203ENST00000525642 LAMB4A4D0S4 1761 aa22.55■■□□□ 1.2
PKP3-203ENST00000525642 TRAPPC3LQ5T215 181 aa22.54■■□□□ 1.2
PKP3-203ENST00000525642 WWC1Q8IX03 1113 aa22.54■■□□□ 1.2
PKP3-203ENST00000525642 NGEFQ8N5V2 710 aa22.54■■□□□ 1.2
PKP3-203ENST00000525642 CALD1Q05682 793 aaKnown RBP22.53■■□□□ 1.2
PKP3-203ENST00000525642 IFT57Q9NWB7 429 aa22.53■■□□□ 1.2
PKP3-203ENST00000525642 PHF14O94880 888 aa22.52■■□□□ 1.2
PKP3-203ENST00000525642 EIF5P55010 431 aaKnown RBP22.52■■□□□ 1.2
PKP3-203ENST00000525642 ATF5Q9Y2D1 282 aaPredicted RBP22.52■■□□□ 1.2
PKP3-203ENST00000525642 A1BGP04217 495 aa22.5■■□□□ 1.19
PKP3-203ENST00000525642 IL6STP40189 918 aaPredicted RBP22.5■■□□□ 1.19
PKP3-203ENST00000525642 GNAI1P63096 354 aa22.5■■□□□ 1.19
PKP3-203ENST00000525642 IL16Q14005 1332 aa22.5■■□□□ 1.19
PKP3-203ENST00000525642 MBIPQ9NS73 344 aa22.49■■□□□ 1.19
PKP3-203ENST00000525642 COL15A1P39059 1388 aa22.49■■□□□ 1.19
PKP3-203ENST00000525642 USP42Q9H9J4 1324 aaKnown RBP22.48■■□□□ 1.19
PKP3-203ENST00000525642 NBPF26B4DH59 902 aa22.47■■□□□ 1.19
PKP3-203ENST00000525642 MSH5O43196 834 aa22.47■■□□□ 1.19
PKP3-203ENST00000525642 GYS1P13807 737 aa22.47■■□□□ 1.19
PKP3-203ENST00000525642 NBPF10Q6P3W6 841 aaKnown RBP22.47■■□□□ 1.19
PKP3-203ENST00000525642 WDR63Q8IWG1 891 aa22.47■■□□□ 1.19
PKP3-203ENST00000525642 NBPF15Q8N660 670 aa22.47■■□□□ 1.19
PKP3-203ENST00000525642 CANXP27824 592 aaKnown RBP22.46■■□□□ 1.19
PKP3-203ENST00000525642 RFC4P35249 363 aa22.46■■□□□ 1.19
PKP3-203ENST00000525642 NARFQ9UHQ1 456 aa22.46■■□□□ 1.19
PKP3-203ENST00000525642 ZNF521Q96K83 1311 aa22.46■■□□□ 1.19
PKP3-203ENST00000525642 HOXB7P09629 217 aa22.45■■□□□ 1.18
PKP3-203ENST00000525642 LAS1LQ9Y4W2 734 aaKnown RBP22.45■■□□□ 1.18
PKP3-203ENST00000525642 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
PKP3-203ENST00000525642 ERBB4Q15303 1308 aa22.44■■□□□ 1.18
PKP3-203ENST00000525642 NLGN1Q8N2Q7 840 aa22.44■■□□□ 1.18
PKP3-203ENST00000525642 A0A087WZG4 1122 aa22.43■■□□□ 1.18
PKP3-203ENST00000525642 KRT24Q2M2I5 525 aa22.43■■□□□ 1.18
PKP3-203ENST00000525642 BCL2L12Q9HB09 334 aa22.43■■□□□ 1.18
PKP3-203ENST00000525642 SRP68Q9UHB9 627 aaKnown RBP22.43■■□□□ 1.18
PKP3-203ENST00000525642 POLD1P28340 1107 aa22.42■■□□□ 1.18
PKP3-203ENST00000525642 MSL1Q68DK7 614 aa22.42■■□□□ 1.18
PKP3-203ENST00000525642 LRP10Q7Z4F1 713 aa22.42■■□□□ 1.18
PKP3-203ENST00000525642 ARXQ96QS3 562 aa22.42■■□□□ 1.18
PKP3-203ENST00000525642 PDIA6Q15084 440 aa22.41■■□□□ 1.18
PKP3-203ENST00000525642 SCN7AQ01118 1682 aa22.41■■□□□ 1.18
PKP3-203ENST00000525642 RGL2O15211 777 aa22.4■■□□□ 1.18
PKP3-203ENST00000525642 BCORQ6W2J9 1755 aa22.4■■□□□ 1.18
PKP3-203ENST00000525642 ZPR1O75312 459 aa22.39■■□□□ 1.17
PKP3-203ENST00000525642 TM4SF1P30408 202 aa22.39■■□□□ 1.17
PKP3-203ENST00000525642 PIP4K2AP48426 406 aaPredicted RBP22.39■■□□□ 1.17
PKP3-203ENST00000525642 FKBP8Q14318 412 aa22.39■■□□□ 1.17
PKP3-203ENST00000525642 USPL1Q5W0Q7 1092 aa22.39■■□□□ 1.17
PKP3-203ENST00000525642 SALL2Q9Y467 1007 aaPredicted RBP22.39■■□□□ 1.17
PKP3-203ENST00000525642 CAMTA2O94983 1202 aa22.38■■□□□ 1.17
PKP3-203ENST00000525642 DUSP27Q5VZP5 1158 aa22.38■■□□□ 1.17
PKP3-203ENST00000525642 SPINK5Q9NQ38 1064 aaPredicted RBP22.38■■□□□ 1.17
PKP3-203ENST00000525642 C8orf58Q8NAV2 365 aa22.37■■□□□ 1.17
PKP3-203ENST00000525642 MMP10P09238 476 aa22.36■■□□□ 1.17
PKP3-203ENST00000525642 DZIP3Q86Y13 1208 aaKnown RBP22.36■■□□□ 1.17
PKP3-203ENST00000525642 TSR2Q969E8 191 aaKnown RBP22.36■■□□□ 1.17
PKP3-203ENST00000525642 PPP1R1BQ9UD71 204 aaPredicted RBP22.36■■□□□ 1.17
PKP3-203ENST00000525642 TBC1D2BQ9UPU7 963 aa22.36■■□□□ 1.17
PKP3-203ENST00000525642 EIF2S2P20042 333 aaKnown RBP22.35■■□□□ 1.17
PKP3-203ENST00000525642 FANCIQ9NVI1 1328 aa22.34■■□□□ 1.17
PKP3-203ENST00000525642 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
PKP3-203ENST00000525642 FHDC1Q9C0D6 1143 aaPredicted RBP22.34■■□□□ 1.17
PKP3-203ENST00000525642 DDX21Q9NR30 783 aaKnown RBP eCLIP22.34■■□□□ 1.17
PKP3-203ENST00000525642 NRXN2Q9P2S2 1712 aa22.34■■□□□ 1.17
PKP3-203ENST00000525642 KIF13BQ9NQT8 1826 aa22.34■■□□□ 1.17
PKP3-203ENST00000525642 DDR1Q08345 913 aa22.33■■□□□ 1.17
PKP3-203ENST00000525642 PROSER3Q2NL68 480 aa22.33■■□□□ 1.17
PKP3-203ENST00000525642 HDGFL1Q5TGJ6 251 aa22.33■■□□□ 1.17
PKP3-203ENST00000525642 TSPYL6Q8N831 410 aa22.33■■□□□ 1.17
PKP3-203ENST00000525642 SYT17Q9BSW7 474 aa22.33■■□□□ 1.17
PKP3-203ENST00000525642 POLRMTO00411 1230 aaKnown RBP22.32■■□□□ 1.16
PKP3-203ENST00000525642 NFIXQ14938 502 aa22.32■■□□□ 1.16
PKP3-203ENST00000525642 NPM2Q86SE8 214 aaKnown RBP22.32■■□□□ 1.16
PKP3-203ENST00000525642 ZNF330Q9Y3S2 320 aaPredicted RBP22.32■■□□□ 1.16
PKP3-203ENST00000525642 ERVV-1B6SEH8 477 aa22.31■■□□□ 1.16
PKP3-203ENST00000525642 MYL6BP14649 208 aa22.31■■□□□ 1.16
PKP3-203ENST00000525642 CD2APQ9Y5K6 639 aa22.31■■□□□ 1.16
PKP3-203ENST00000525642 TTLL7Q6ZT98 887 aa22.3■■□□□ 1.16
PKP3-203ENST00000525642 DBF4Q9UBU7 674 aaPredicted RBP22.3■■□□□ 1.16
PKP3-203ENST00000525642 AFDNP55196 1824 aaKnown RBP22.29■■□□□ 1.16
PKP3-203ENST00000525642 ELL2O00472 640 aaPredicted RBP22.29■■□□□ 1.16
PKP3-203ENST00000525642 GOLGA2Q08379 1002 aa22.29■■□□□ 1.16
PKP3-203ENST00000525642 TBC1D9BQ66K14 1250 aa22.29■■□□□ 1.16
PKP3-203ENST00000525642 CHMP4AQ9BY43 222 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms