RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 ZNF521Q96K83 1311 aa16.08■□□□□ 0.16
CCS-202ENST00000525435 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.16
CCS-202ENST00000525435 UBR2Q8IWV8 1755 aa16.06■□□□□ 0.16
CCS-202ENST00000525435 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
CCS-202ENST00000525435 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
CCS-202ENST00000525435 COL23A1Q86Y22 540 aaPredicted RBP16.06■□□□□ 0.16
CCS-202ENST00000525435 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
CCS-202ENST00000525435 C5P01031 1676 aa16.05■□□□□ 0.16
CCS-202ENST00000525435 ERBB4Q15303 1308 aa16.05■□□□□ 0.16
CCS-202ENST00000525435 A0A087WZG4 1122 aa16.05■□□□□ 0.16
CCS-202ENST00000525435 EIF5P55010 431 aaKnown RBP16.05■□□□□ 0.16
CCS-202ENST00000525435 GOLGA2Q08379 1002 aa16.05■□□□□ 0.16
CCS-202ENST00000525435 C4BP0C0L5 1744 aa16.05■□□□□ 0.16
CCS-202ENST00000525435 SENP3-EIF4A1A0A087X0R7 540 aa16.04■□□□□ 0.16
CCS-202ENST00000525435 PRAMEF22A3QJZ6 481 aa16.04■□□□□ 0.16
CCS-202ENST00000525435 A1BGP04217 495 aa16.04■□□□□ 0.16
CCS-202ENST00000525435 RFC4P35249 363 aa16.04■□□□□ 0.16
CCS-202ENST00000525435 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
CCS-202ENST00000525435 NPM2Q86SE8 214 aaKnown RBP16.04■□□□□ 0.16
CCS-202ENST00000525435 ARHGEF1Q92888 912 aaKnown RBP16.04■□□□□ 0.16
CCS-202ENST00000525435 MTFR1LQ9H019 292 aa16.04■□□□□ 0.16
CCS-202ENST00000525435 ZBTB1Q9Y2K1 713 aa16.04■□□□□ 0.16
CCS-202ENST00000525435 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
CCS-202ENST00000525435 AMIGO3Q86WK7 504 aa16.03■□□□□ 0.16
CCS-202ENST00000525435 TAF1LQ8IZX4 1826 aa16.03■□□□□ 0.16
CCS-202ENST00000525435 E9PSI1 815 aa16.02■□□□□ 0.16
CCS-202ENST00000525435 RGL2O15211 777 aa16.02■□□□□ 0.16
CCS-202ENST00000525435 MSH5O43196 834 aa16.02■□□□□ 0.16
CCS-202ENST00000525435 PDGFDQ9GZP0 370 aaPredicted RBP16.02■□□□□ 0.16
CCS-202ENST00000525435 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
CCS-202ENST00000525435 KDM3BQ7LBC6 1761 aa16.01■□□□□ 0.15
CCS-202ENST00000525435 NBPF26B4DH59 902 aa16.01■□□□□ 0.15
CCS-202ENST00000525435 PHF14O94880 888 aa16.01■□□□□ 0.15
CCS-202ENST00000525435 NBPF10Q6P3W6 841 aaKnown RBP16.01■□□□□ 0.15
CCS-202ENST00000525435 NLGN1Q8N2Q7 840 aa16.01■□□□□ 0.15
CCS-202ENST00000525435 NBPF15Q8N660 670 aa16.01■□□□□ 0.15
CCS-202ENST00000525435 NARFQ9UHQ1 456 aa16.01■□□□□ 0.15
CCS-202ENST00000525435 FANCIQ9NVI1 1328 aa16■□□□□ 0.15
CCS-202ENST00000525435 TJP1Q07157 1748 aa16■□□□□ 0.15
CCS-202ENST00000525435 ZPR1O75312 459 aa16■□□□□ 0.15
CCS-202ENST00000525435 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
CCS-202ENST00000525435 TSR2Q969E8 191 aaKnown RBP16■□□□□ 0.15
CCS-202ENST00000525435 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
CCS-202ENST00000525435 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
CCS-202ENST00000525435 LRP5O75197 1615 aa15.99■□□□□ 0.15
CCS-202ENST00000525435 ZBTB7AO95365 584 aa15.99■□□□□ 0.15
CCS-202ENST00000525435 EIF2S2P20042 333 aaKnown RBP15.99■□□□□ 0.15
CCS-202ENST00000525435 SLFN5Q08AF3 891 aa15.99■□□□□ 0.15
CCS-202ENST00000525435 KRT24Q2M2I5 525 aa15.99■□□□□ 0.15
CCS-202ENST00000525435 HDGFL1Q5TGJ6 251 aa15.99■□□□□ 0.15
CCS-202ENST00000525435 MYH14Q7Z406 1995 aaKnown RBP15.98■□□□□ 0.15
CCS-202ENST00000525435 USP42Q9H9J4 1324 aaKnown RBP15.98■□□□□ 0.15
CCS-202ENST00000525435 HNRNPUQ00839 825 aaKnown RBP eCLIP15.98■□□□□ 0.15
CCS-202ENST00000525435 PDIA6Q15084 440 aa15.98■□□□□ 0.15
CCS-202ENST00000525435 QSER1Q2KHR3 1735 aa15.98■□□□□ 0.15
CCS-202ENST00000525435 TRMT2AQ8IZ69 625 aaKnown RBP15.98■□□□□ 0.15
CCS-202ENST00000525435 DDX21Q9NR30 783 aaKnown RBP eCLIP15.98■□□□□ 0.15
CCS-202ENST00000525435 DBF4Q9UBU7 674 aaPredicted RBP15.98■□□□□ 0.15
CCS-202ENST00000525435 COL15A1P39059 1388 aa15.98■□□□□ 0.15
CCS-202ENST00000525435 POLD1P28340 1107 aa15.97■□□□□ 0.15
CCS-202ENST00000525435 TWISTNBQ3B726 338 aaPredicted RBP15.97■□□□□ 0.15
CCS-202ENST00000525435 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
CCS-202ENST00000525435 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
CCS-202ENST00000525435 SMIM5Q71RC9 77 aa15.97■□□□□ 0.15
CCS-202ENST00000525435 ERVV-1B6SEH8 477 aa15.96■□□□□ 0.15
CCS-202ENST00000525435 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.15
CCS-202ENST00000525435 VAMP4O75379 141 aa15.96■□□□□ 0.15
CCS-202ENST00000525435 GYS1P13807 737 aa15.96■□□□□ 0.15
CCS-202ENST00000525435 PTGER2P43116 358 aa15.96■□□□□ 0.15
CCS-202ENST00000525435 TSPYL6Q8N831 410 aa15.96■□□□□ 0.15
CCS-202ENST00000525435 SGIP1Q9BQI5 828 aa15.96■□□□□ 0.15
CCS-202ENST00000525435 HYPKQ9NX55 129 aa15.96■□□□□ 0.15
CCS-202ENST00000525435 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
CCS-202ENST00000525435 UBR3Q6ZT12 1888 aa15.96■□□□□ 0.15
CCS-202ENST00000525435 EXOSC9Q06265 439 aaKnown RBP15.95■□□□□ 0.14
CCS-202ENST00000525435 LRP10Q7Z4F1 713 aa15.95■□□□□ 0.14
CCS-202ENST00000525435 DZIP3Q86Y13 1208 aaKnown RBP15.95■□□□□ 0.14
CCS-202ENST00000525435 ZNF428Q96B54 188 aa15.95■□□□□ 0.14
CCS-202ENST00000525435 ZNF330Q9Y3S2 320 aaPredicted RBP15.95■□□□□ 0.14
CCS-202ENST00000525435 ZBED9Q6R2W3 1325 aa15.94■□□□□ 0.14
CCS-202ENST00000525435 CT47B1P0C2W7 299 aaPredicted RBP15.94■□□□□ 0.14
CCS-202ENST00000525435 USPL1Q5W0Q7 1092 aa15.94■□□□□ 0.14
CCS-202ENST00000525435 TBC1D2BQ9UPU7 963 aa15.94■□□□□ 0.14
CCS-202ENST00000525435 CASZ1Q86V15 1759 aa15.94■□□□□ 0.14
CCS-202ENST00000525435 CAMTA2O94983 1202 aa15.93■□□□□ 0.14
CCS-202ENST00000525435 MYL6BP14649 208 aa15.93■□□□□ 0.14
CCS-202ENST00000525435 PIP4K2AP48426 406 aaPredicted RBP15.93■□□□□ 0.14
CCS-202ENST00000525435 CDCA7LQ96GN5 454 aa15.93■□□□□ 0.14
CCS-202ENST00000525435 ARXQ96QS3 562 aa15.93■□□□□ 0.14
CCS-202ENST00000525435 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
CCS-202ENST00000525435 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
CCS-202ENST00000525435 SRP68Q9UHB9 627 aaKnown RBP15.93■□□□□ 0.14
CCS-202ENST00000525435 ZNF652Q9Y2D9 606 aa15.93■□□□□ 0.14
CCS-202ENST00000525435 TM4SF1P30408 202 aa15.92■□□□□ 0.14
CCS-202ENST00000525435 FKBP8Q14318 412 aa15.92■□□□□ 0.14
CCS-202ENST00000525435 PROSER3Q2NL68 480 aa15.92■□□□□ 0.14
CCS-202ENST00000525435 KIF6Q6ZMV9 814 aa15.92■□□□□ 0.14
CCS-202ENST00000525435 NECTIN2Q92692 538 aa15.92■□□□□ 0.14
CCS-202ENST00000525435 BCL2L12Q9HB09 334 aa15.92■□□□□ 0.14
CCS-202ENST00000525435 COPS6Q7L5N1 327 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms