RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
TTC39A-213ENST00000524442 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
TTC39A-213ENST00000524442 RFC4P35249 363 aa13.24□□□□□ -0.29
TTC39A-213ENST00000524442 EIF4A1P60842 406 aaKnown RBP13.24□□□□□ -0.29
TTC39A-213ENST00000524442 CCDC27Q2M243 656 aa13.24□□□□□ -0.29
TTC39A-213ENST00000524442 ARHGEF1Q92888 912 aaKnown RBP13.24□□□□□ -0.29
TTC39A-213ENST00000524442 MIS18AQ9NYP9 233 aa13.24□□□□□ -0.29
TTC39A-213ENST00000524442 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
TTC39A-213ENST00000524442 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
TTC39A-213ENST00000524442 CHL1O00533 1208 aa13.23□□□□□ -0.29
TTC39A-213ENST00000524442 A0A087WZG4 1122 aa13.22□□□□□ -0.29
TTC39A-213ENST00000524442 GIGYF1O75420 1035 aaPredicted RBP13.22□□□□□ -0.29
TTC39A-213ENST00000524442 DIEXFQ68CQ4 756 aaKnown RBP13.22□□□□□ -0.29
TTC39A-213ENST00000524442 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
TTC39A-213ENST00000524442 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
TTC39A-213ENST00000524442 CFAP44Q96MT7 982 aa13.22□□□□□ -0.29
TTC39A-213ENST00000524442 ARXQ96QS3 562 aa13.22□□□□□ -0.29
TTC39A-213ENST00000524442 ZBTB1Q9Y2K1 713 aa13.22□□□□□ -0.29
TTC39A-213ENST00000524442 USP16Q9Y5T5 823 aa13.22□□□□□ -0.29
TTC39A-213ENST00000524442 MYH14Q7Z406 1995 aaKnown RBP13.21□□□□□ -0.29
TTC39A-213ENST00000524442 CANXP27824 592 aaKnown RBP13.21□□□□□ -0.29
TTC39A-213ENST00000524442 IL6STP40189 918 aaPredicted RBP13.21□□□□□ -0.29
TTC39A-213ENST00000524442 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.29
TTC39A-213ENST00000524442 SMIM5Q71RC9 77 aa13.21□□□□□ -0.29
TTC39A-213ENST00000524442 NPM2Q86SE8 214 aaKnown RBP13.21□□□□□ -0.29
TTC39A-213ENST00000524442 FAM9BQ8IZU0 186 aa13.21□□□□□ -0.29
TTC39A-213ENST00000524442 KDM3BQ7LBC6 1761 aa13.21□□□□□ -0.29
TTC39A-213ENST00000524442 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.3
TTC39A-213ENST00000524442 GNAI1P63096 354 aa13.2□□□□□ -0.3
TTC39A-213ENST00000524442 IFT57Q9NWB7 429 aa13.2□□□□□ -0.3
TTC39A-213ENST00000524442 COL15A1P39059 1388 aa13.2□□□□□ -0.3
TTC39A-213ENST00000524442 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
TTC39A-213ENST00000524442 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
TTC39A-213ENST00000524442 ZPR1O75312 459 aa13.19□□□□□ -0.3
TTC39A-213ENST00000524442 A1BGP04217 495 aa13.19□□□□□ -0.3
TTC39A-213ENST00000524442 ZNF853P0CG23 659 aa13.19□□□□□ -0.3
TTC39A-213ENST00000524442 GYS1P13807 737 aa13.19□□□□□ -0.3
TTC39A-213ENST00000524442 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
TTC39A-213ENST00000524442 NARFQ9UHQ1 456 aa13.19□□□□□ -0.3
TTC39A-213ENST00000524442 ERBB4Q15303 1308 aa13.18□□□□□ -0.3
TTC39A-213ENST00000524442 HOXB7P09629 217 aa13.18□□□□□ -0.3
TTC39A-213ENST00000524442 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
TTC39A-213ENST00000524442 LAS1LQ9Y4W2 734 aaKnown RBP13.18□□□□□ -0.3
TTC39A-213ENST00000524442 IL16Q14005 1332 aa13.17□□□□□ -0.3
TTC39A-213ENST00000524442 RGL2O15211 777 aa13.16□□□□□ -0.3
TTC39A-213ENST00000524442 USPL1Q5W0Q7 1092 aa13.16□□□□□ -0.3
TTC39A-213ENST00000524442 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
TTC39A-213ENST00000524442 SYT17Q9BSW7 474 aa13.16□□□□□ -0.3
TTC39A-213ENST00000524442 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
TTC39A-213ENST00000524442 FHDC1Q9C0D6 1143 aaPredicted RBP13.16□□□□□ -0.3
TTC39A-213ENST00000524442 MBIPQ9NS73 344 aa13.16□□□□□ -0.3
TTC39A-213ENST00000524442 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
TTC39A-213ENST00000524442 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
TTC39A-213ENST00000524442 MMP10P09238 476 aa13.15□□□□□ -0.3
TTC39A-213ENST00000524442 FKBP8Q14318 412 aa13.15□□□□□ -0.3
TTC39A-213ENST00000524442 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
TTC39A-213ENST00000524442 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
TTC39A-213ENST00000524442 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
TTC39A-213ENST00000524442 C4AP0C0L4 1744 aa13.15□□□□□ -0.3
TTC39A-213ENST00000524442 LAMB4A4D0S4 1761 aa13.15□□□□□ -0.31
TTC39A-213ENST00000524442 DZIP3Q86Y13 1208 aaKnown RBP13.14□□□□□ -0.31
TTC39A-213ENST00000524442 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
TTC39A-213ENST00000524442 CD2APQ9Y5K6 639 aa13.14□□□□□ -0.31
TTC39A-213ENST00000524442 TM4SF1P30408 202 aa13.13□□□□□ -0.31
TTC39A-213ENST00000524442 CLEC4GQ6UXB4 293 aa13.13□□□□□ -0.31
TTC39A-213ENST00000524442 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
TTC39A-213ENST00000524442 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
TTC39A-213ENST00000524442 CAMTA2O94983 1202 aa13.12□□□□□ -0.31
TTC39A-213ENST00000524442 EIF2S2P20042 333 aaKnown RBP13.12□□□□□ -0.31
TTC39A-213ENST00000524442 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
TTC39A-213ENST00000524442 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
TTC39A-213ENST00000524442 MIER1Q8N108 512 aa13.12□□□□□ -0.31
TTC39A-213ENST00000524442 ZNF652Q9Y2D9 606 aa13.12□□□□□ -0.31
TTC39A-213ENST00000524442 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
TTC39A-213ENST00000524442 ERVV-1B6SEH8 477 aa13.1□□□□□ -0.31
TTC39A-213ENST00000524442 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
TTC39A-213ENST00000524442 NFIXQ14938 502 aa13.1□□□□□ -0.31
TTC39A-213ENST00000524442 PDIA6Q15084 440 aa13.1□□□□□ -0.31
TTC39A-213ENST00000524442 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
TTC39A-213ENST00000524442 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
TTC39A-213ENST00000524442 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
TTC39A-213ENST00000524442 DDX21Q9NR30 783 aaKnown RBP eCLIP13.1□□□□□ -0.31
TTC39A-213ENST00000524442 DBF4Q9UBU7 674 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-213ENST00000524442 SALL2Q9Y467 1007 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-213ENST00000524442 SENP3-EIF4A1A0A087X0R7 540 aa13.09□□□□□ -0.31
TTC39A-213ENST00000524442 MYL6BP14649 208 aa13.09□□□□□ -0.31
TTC39A-213ENST00000524442 DDR1Q08345 913 aa13.09□□□□□ -0.31
TTC39A-213ENST00000524442 KIF6Q6ZMV9 814 aa13.09□□□□□ -0.31
TTC39A-213ENST00000524442 SETDB2Q96T68 719 aa13.09□□□□□ -0.31
TTC39A-213ENST00000524442 ZNF521Q96K83 1311 aa13.09□□□□□ -0.31
TTC39A-213ENST00000524442 SCN7AQ01118 1682 aa13.08□□□□□ -0.31
TTC39A-213ENST00000524442 C10orf71Q711Q0 1435 aa13.08□□□□□ -0.32
TTC39A-213ENST00000524442 TGFB2P61812 414 aa13.08□□□□□ -0.32
TTC39A-213ENST00000524442 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
TTC39A-213ENST00000524442 TBC1D9BQ66K14 1250 aa13.08□□□□□ -0.32
TTC39A-213ENST00000524442 LRP10Q7Z4F1 713 aa13.08□□□□□ -0.32
TTC39A-213ENST00000524442 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
TTC39A-213ENST00000524442 TSR2Q969E8 191 aaKnown RBP13.08□□□□□ -0.32
TTC39A-213ENST00000524442 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
TTC39A-213ENST00000524442 MAP3K15Q6ZN16 1313 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms