RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 VRTNQ9H8Y1 702 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 RRAGCQ9HB90 399 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 GPAMQ9HCL2 828 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 RAB6BQ9NRW1 208 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 RANGAP1P46060 587 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-214ENST00000524177 MFAP1P55081 439 aaKnown RBP6.08□□□□□ -1.44
CSMD1-214ENST00000524177 WDR44Q5JSH3 913 aa6.08□□□□□ -1.44
CSMD1-214ENST00000524177 TMEM164Q5U3C3 297 aa6.08□□□□□ -1.44
CSMD1-214ENST00000524177 PHTF2Q8N3S3 785 aa6.08□□□□□ -1.44
CSMD1-214ENST00000524177 CFHR5Q9BXR6 569 aa6.08□□□□□ -1.44
CSMD1-214ENST00000524177 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
CSMD1-214ENST00000524177 FAM196BA6NMK8 535 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L15C9J2P7 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L10C9JJH3 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L13C9JLJ4 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L12C9JPN9 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L11C9JVI0 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L21D6R901 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L18D6R9N7 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L22D6RA61 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L17D6RBQ6 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L19D6RCP7 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L20D6RJB6 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 PHKA2P46019 1235 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 USP17L24Q0WX57 530 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 GRIN2CQ14957 1233 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 CRTC2Q53ET0 693 aaPredicted RBP6.07□□□□□ -1.44
CSMD1-214ENST00000524177 RNF20Q5VTR2 975 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 RGS22Q8NE09 1264 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 EDARADDQ8WWZ3 215 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 OSBPL3Q9H4L5 887 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 CEP126Q9P2H0 1117 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 CHIC2Q9UKJ5 165 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 NOVA2Q9UNW9 492 aaKnown RBP6.07□□□□□ -1.44
CSMD1-214ENST00000524177 IVNS1ABPQ9Y6Y0 642 aa6.07□□□□□ -1.44
CSMD1-214ENST00000524177 NCOA4Q13772 614 aa6.06□□□□□ -1.44
CSMD1-214ENST00000524177 CCDC125Q86Z20 511 aa6.06□□□□□ -1.44
CSMD1-214ENST00000524177 PLPP7Q8NBV4 271 aa6.06□□□□□ -1.44
CSMD1-214ENST00000524177 SUV39H2Q9H5I1 410 aa6.06□□□□□ -1.44
CSMD1-214ENST00000524177 PCDHB11Q9Y5F2 797 aa6.06□□□□□ -1.44
CSMD1-214ENST00000524177 PTK7Q13308 1070 aa6.05□□□□□ -1.44
CSMD1-214ENST00000524177 SLFNL1Q499Z3 407 aa6.05□□□□□ -1.44
CSMD1-214ENST00000524177 ALYREFQ86V81 257 aaKnown RBP6.05□□□□□ -1.44
CSMD1-214ENST00000524177 RNF135Q8IUD6 432 aa6.05□□□□□ -1.44
CSMD1-214ENST00000524177 ZNF592Q92610 1267 aa6.05□□□□□ -1.44
CSMD1-214ENST00000524177 CNKSR1Q969H4 720 aa6.05□□□□□ -1.44
CSMD1-214ENST00000524177 SLAIN2Q9P270 581 aa6.05□□□□□ -1.44
CSMD1-214ENST00000524177 MKRN1Q9UHC7 482 aaKnown RBP6.05□□□□□ -1.44
CSMD1-214ENST00000524177 GDF2Q9UK05 429 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-214ENST00000524177 PHF24Q9UPV7 400 aa6.05□□□□□ -1.44
CSMD1-214ENST00000524177 IL2RAP01589 272 aa6.04□□□□□ -1.44
CSMD1-214ENST00000524177 AMPD1P23109 780 aa6.04□□□□□ -1.44
CSMD1-214ENST00000524177 MCCD1P59942 119 aaPredicted RBP6.04□□□□□ -1.44
CSMD1-214ENST00000524177 CENPCQ03188 943 aa6.04□□□□□ -1.44
CSMD1-214ENST00000524177 UBAP2LQ14157 1087 aaKnown RBP6.04□□□□□ -1.44
CSMD1-214ENST00000524177 PHLDB3Q6NSJ2 640 aa6.04□□□□□ -1.44
CSMD1-214ENST00000524177 GOLGA6L1Q8N7Z2 621 aa6.04□□□□□ -1.44
CSMD1-214ENST00000524177 ESF1Q9H501 851 aaKnown RBP6.04□□□□□ -1.44
CSMD1-214ENST00000524177 MTMR7Q9Y216 660 aa6.04□□□□□ -1.44
CSMD1-214ENST00000524177 A0A1B0GTH6 734 aa6.03□□□□□ -1.44
CSMD1-214ENST00000524177 C2CD2LO14523 706 aa6.03□□□□□ -1.44
CSMD1-214ENST00000524177 BMP4P12644 408 aa6.03□□□□□ -1.44
CSMD1-214ENST00000524177 HOXB4P17483 251 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-214ENST00000524177 FAM69CQ0P6D2 419 aa6.03□□□□□ -1.44
CSMD1-214ENST00000524177 TSGA10IPQ3SY00 556 aa6.03□□□□□ -1.44
CSMD1-214ENST00000524177 LINC00114Q6XXX2 140 aa6.03□□□□□ -1.44
CSMD1-214ENST00000524177 CCDC85AQ96PX6 553 aaPredicted RBP6.03□□□□□ -1.44
CSMD1-214ENST00000524177 ESYT1Q9BSJ8 1104 aa6.03□□□□□ -1.44
CSMD1-214ENST00000524177 RUBCNLQ9H714 662 aa6.03□□□□□ -1.44
CSMD1-214ENST00000524177 GNEQ9Y223 722 aaKnown RBP6.03□□□□□ -1.44
CSMD1-214ENST00000524177 C1QTNF9BB2RNN3 333 aa6.02□□□□□ -1.45
CSMD1-214ENST00000524177 GNRH1P01148 92 aa6.02□□□□□ -1.45
CSMD1-214ENST00000524177 SND1Q7KZF4 910 aaKnown RBP eCLIP6.02□□□□□ -1.45
CSMD1-214ENST00000524177 ABHD17AQ96GS6 310 aa6.02□□□□□ -1.45
CSMD1-214ENST00000524177 ZSCAN10Q96SZ4 725 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-214ENST00000524177 GGA1Q9UJY5 639 aa6.02□□□□□ -1.45
CSMD1-214ENST00000524177 LZTS3O60299 673 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-214ENST00000524177 RASA1P20936 1047 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 CLDN10P78369 228 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 CTBSQ01459 385 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 EML3Q32P44 896 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 MAP7D1Q3KQU3 841 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 C4orf17Q53FE4 359 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 B4GALNT3Q6L9W6 998 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 ANKMY2Q8IV38 441 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 PGBD3Q8N328 593 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 PSMG3-AS1Q96PY0 264 aa6.01□□□□□ -1.45
CSMD1-214ENST00000524177 ATXN7L1Q9ULK2 861 aaPredicted RBP6.01□□□□□ -1.45
CSMD1-214ENST00000524177 GNB5O14775 395 aa6□□□□□ -1.45
CSMD1-214ENST00000524177 BNIP3LO60238 219 aa6□□□□□ -1.45
CSMD1-214ENST00000524177 FGFR3P22607 806 aa6□□□□□ -1.45
CSMD1-214ENST00000524177 MSX1P28360 303 aa6□□□□□ -1.45
CSMD1-214ENST00000524177 CHRNA4P43681 627 aa6□□□□□ -1.45
CSMD1-214ENST00000524177 LBRQ14739 615 aaKnown RBP6□□□□□ -1.45
CSMD1-214ENST00000524177 EFHC2Q5JST6 749 aa6□□□□□ -1.45
CSMD1-214ENST00000524177 GNASQ5JWF2 1037 aa6□□□□□ -1.45
CSMD1-214ENST00000524177 TMEM214Q6NUQ4 689 aaKnown RBP6□□□□□ -1.45
CSMD1-214ENST00000524177 LARP1Q6PKG0 1096 aaKnown RBP6□□□□□ -1.45
CSMD1-214ENST00000524177 SLCO4C1Q6ZQN7 724 aa6□□□□□ -1.45
CSMD1-214ENST00000524177 CD163Q86VB7 1156 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms