RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
CSMD1-214ENST00000524177 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
CSMD1-214ENST00000524177 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
CSMD1-214ENST00000524177 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
CSMD1-214ENST00000524177 FOXD1Q16676 465 aa15.6■□□□□ 0.09
CSMD1-214ENST00000524177 MSH5O43196 834 aa14.63□□□□□ -0.07
CSMD1-214ENST00000524177 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
CSMD1-214ENST00000524177 POTEDQ86YR6 584 aa14.6□□□□□ -0.07
CSMD1-214ENST00000524177 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
CSMD1-214ENST00000524177 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
CSMD1-214ENST00000524177 ADRA2BP18089 450 aa14.42□□□□□ -0.1
CSMD1-214ENST00000524177 MAPK8IP2Q13387 824 aaPredicted RBP13.3□□□□□ -0.28
CSMD1-214ENST00000524177 DMRT2Q9Y5R5 561 aa13.2□□□□□ -0.3
CSMD1-214ENST00000524177 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
CSMD1-214ENST00000524177 PPP4R3CPQ6ZMV5 832 aa12.82□□□□□ -0.36
CSMD1-214ENST00000524177 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
CSMD1-214ENST00000524177 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
CSMD1-214ENST00000524177 HOXD11P31277 338 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-214ENST00000524177 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
CSMD1-214ENST00000524177 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
CSMD1-214ENST00000524177 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
CSMD1-214ENST00000524177 C1QBPQ07021 282 aaKnown RBP12.27□□□□□ -0.45
CSMD1-214ENST00000524177 NCBP3Q53F19 620 aaKnown RBP12.24□□□□□ -0.45
CSMD1-214ENST00000524177 DNAJC5BQ9UF47 199 aa12.2□□□□□ -0.46
CSMD1-214ENST00000524177 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
CSMD1-214ENST00000524177 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.08□□□□□ -0.48
CSMD1-214ENST00000524177 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
CSMD1-214ENST00000524177 KCNA4P22459 653 aa11.73□□□□□ -0.53
CSMD1-214ENST00000524177 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
CSMD1-214ENST00000524177 CAPN15O75808 1086 aa11.69□□□□□ -0.54
CSMD1-214ENST00000524177 DSG3P32926 999 aa11.64□□□□□ -0.55
CSMD1-214ENST00000524177 SLC4A2P04920 1241 aa11.59□□□□□ -0.55
CSMD1-214ENST00000524177 TRHP20396 242 aaPredicted RBP11.47□□□□□ -0.57
CSMD1-214ENST00000524177 ABCB7O75027 752 aa11.43□□□□□ -0.58
CSMD1-214ENST00000524177 APLP2Q06481 763 aa11.41□□□□□ -0.58
CSMD1-214ENST00000524177 POTEHQ6S545 545 aa11.4□□□□□ -0.58
CSMD1-214ENST00000524177 ZNF219Q9P2Y4 722 aaPredicted RBP11.4□□□□□ -0.58
CSMD1-214ENST00000524177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-214ENST00000524177 HNRNPUL2Q1KMD3 747 aaKnown RBP11.37□□□□□ -0.59
CSMD1-214ENST00000524177 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
CSMD1-214ENST00000524177 MYCNP04198 464 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-214ENST00000524177 POLA2Q14181 598 aa11.1□□□□□ -0.63
CSMD1-214ENST00000524177 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
CSMD1-214ENST00000524177 SLC4A1APQ9BWU0 796 aaKnown RBP11.02□□□□□ -0.65
CSMD1-214ENST00000524177 FOXD4L1Q9NU39 408 aa10.98□□□□□ -0.65
CSMD1-214ENST00000524177 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
CSMD1-214ENST00000524177 CHRDL2Q6WN34 429 aa10.93□□□□□ -0.66
CSMD1-214ENST00000524177 ZBTB12Q9Y330 459 aaPredicted RBP10.82□□□□□ -0.68
CSMD1-214ENST00000524177 AKT1S1Q96B36 256 aa10.8□□□□□ -0.68
CSMD1-214ENST00000524177 ZBTB22O15209 634 aa10.79□□□□□ -0.68
CSMD1-214ENST00000524177 OSCARQ8IYS5 282 aa10.77□□□□□ -0.69
CSMD1-214ENST00000524177 REM2Q8IYK8 340 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-214ENST00000524177 PIP4P2Q8N4L2 257 aa10.65□□□□□ -0.7
CSMD1-214ENST00000524177 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
CSMD1-214ENST00000524177 ATXN8OSP0DMR3 200 aa10.62□□□□□ -0.71
CSMD1-214ENST00000524177 SP7Q8TDD2 431 aaPredicted RBP10.61□□□□□ -0.71
CSMD1-214ENST00000524177 FXR2P51116 673 aaKnown RBP eCLIP10.54□□□□□ -0.72
CSMD1-214ENST00000524177 FBLN2P98095 1184 aa10.52□□□□□ -0.73
CSMD1-214ENST00000524177 HAX1O00165 279 aa10.5□□□□□ -0.73
CSMD1-214ENST00000524177 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
CSMD1-214ENST00000524177 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
CSMD1-214ENST00000524177 SPDYE2Q495Y8 402 aa10.49□□□□□ -0.73
CSMD1-214ENST00000524177 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
CSMD1-214ENST00000524177 CLEC11AQ9Y240 323 aa10.39□□□□□ -0.75
CSMD1-214ENST00000524177 EVX2Q03828 476 aa10.37□□□□□ -0.75
CSMD1-214ENST00000524177 ZNF692Q9BU19 519 aaPredicted RBP10.36□□□□□ -0.75
CSMD1-214ENST00000524177 SPDYE1Q8NFV5 336 aaPredicted RBP10.35□□□□□ -0.75
CSMD1-214ENST00000524177 EHMT2Q96KQ7 1210 aa10.35□□□□□ -0.75
CSMD1-214ENST00000524177 PRKAR2AP13861 404 aaKnown RBP10.34□□□□□ -0.75
CSMD1-214ENST00000524177 SSUH2Q9Y2M2 353 aa10.34□□□□□ -0.75
CSMD1-214ENST00000524177 CHADLQ6NUI6 762 aa10.22□□□□□ -0.77
CSMD1-214ENST00000524177 C19orf67A6NJJ6 358 aa10.21□□□□□ -0.77
CSMD1-214ENST00000524177 PABPN1Q86U42 306 aaKnown RBP eCLIP10.21□□□□□ -0.77
CSMD1-214ENST00000524177 PRR29P0C7W0 189 aa10.17□□□□□ -0.78
CSMD1-214ENST00000524177 CSRNP3Q8WYN3 585 aa10.13□□□□□ -0.79
CSMD1-214ENST00000524177 GABBR2O75899 941 aa10.11□□□□□ -0.79
CSMD1-214ENST00000524177 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
CSMD1-214ENST00000524177 FARP1Q9Y4F1 1045 aaPredicted RBP10.01□□□□□ -0.81
CSMD1-214ENST00000524177 LHX8Q68G74 356 aa9.95□□□□□ -0.82
CSMD1-214ENST00000524177 POTEIP0CG38 1075 aa9.9□□□□□ -0.82
CSMD1-214ENST00000524177 CREBZFQ9NS37 354 aa9.88□□□□□ -0.83
CSMD1-214ENST00000524177 SPDYE4A6NLX3 237 aa9.86□□□□□ -0.83
CSMD1-214ENST00000524177 STAG3Q9UJ98 1225 aa9.86□□□□□ -0.83
CSMD1-214ENST00000524177 ZRANB1Q9UGI0 708 aa9.85□□□□□ -0.83
CSMD1-214ENST00000524177 CLCN6P51797 869 aa9.83□□□□□ -0.84
CSMD1-214ENST00000524177 ZNF579Q8NAF0 562 aaKnown RBP9.82□□□□□ -0.84
CSMD1-214ENST00000524177 DCBLD2Q96PD2 775 aa9.8□□□□□ -0.84
CSMD1-214ENST00000524177 GALR2O43603 387 aaPredicted RBP9.75□□□□□ -0.85
CSMD1-214ENST00000524177 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.86
CSMD1-214ENST00000524177 PHF12Q96QT6 1004 aa9.7□□□□□ -0.86
CSMD1-214ENST00000524177 MNX1P50219 401 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-214ENST00000524177 NPM1P06748 294 aaKnown RBP eCLIP9.67□□□□□ -0.86
CSMD1-214ENST00000524177 POTEB2H3BUK9 544 aa9.59□□□□□ -0.87
CSMD1-214ENST00000524177 PELP1Q8IZL8 1130 aaKnown RBP9.57□□□□□ -0.88
CSMD1-214ENST00000524177 OTUD5Q96G74 571 aa9.57□□□□□ -0.88
CSMD1-214ENST00000524177 PROM2Q8N271 834 aa9.56□□□□□ -0.88
CSMD1-214ENST00000524177 MS4A3Q96HJ5 214 aa9.56□□□□□ -0.88
CSMD1-214ENST00000524177 TSPYL2Q9H2G4 693 aaPredicted RBP9.54□□□□□ -0.88
CSMD1-214ENST00000524177 ASTLQ6HA08 431 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-214ENST00000524177 ATMINO43313 823 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms