RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 CFAP44Q96MT7 982 aa21.09■□□□□ 0.97
TRAPPC9-214ENST00000523777 PHF14O94880 888 aa21.08■□□□□ 0.97
TRAPPC9-214ENST00000523777 EIF4A1P60842 406 aaKnown RBP21.08■□□□□ 0.97
TRAPPC9-214ENST00000523777 GNAI1P63096 354 aa21.08■□□□□ 0.97
TRAPPC9-214ENST00000523777 INTS5Q6P9B9 1019 aaKnown RBP21.08■□□□□ 0.97
TRAPPC9-214ENST00000523777 ZBTB7AO95365 584 aa21.07■□□□□ 0.96
TRAPPC9-214ENST00000523777 NPM2Q86SE8 214 aaKnown RBP21.07■□□□□ 0.96
TRAPPC9-214ENST00000523777 PDGFDQ9GZP0 370 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC9-214ENST00000523777 IFT57Q9NWB7 429 aa21.07■□□□□ 0.96
TRAPPC9-214ENST00000523777 RFC4P35249 363 aa21.06■□□□□ 0.96
TRAPPC9-214ENST00000523777 LAS1LQ9Y4W2 734 aaKnown RBP21.06■□□□□ 0.96
TRAPPC9-214ENST00000523777 A0A087WZG4 1122 aa21.05■□□□□ 0.96
TRAPPC9-214ENST00000523777 GIGYF1O75420 1035 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC9-214ENST00000523777 POLD1P28340 1107 aa21.05■□□□□ 0.96
TRAPPC9-214ENST00000523777 WWC1Q8IX03 1113 aa21.05■□□□□ 0.96
TRAPPC9-214ENST00000523777 MIER1Q8N108 512 aa21.04■□□□□ 0.96
TRAPPC9-214ENST00000523777 ARHGEF1Q92888 912 aaKnown RBP21.04■□□□□ 0.96
TRAPPC9-214ENST00000523777 ATF5Q9Y2D1 282 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC9-214ENST00000523777 USP16Q9Y5T5 823 aa21.04■□□□□ 0.96
TRAPPC9-214ENST00000523777 SOS1Q07889 1333 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC9-214ENST00000523777 IL16Q14005 1332 aa21.04■□□□□ 0.96
TRAPPC9-214ENST00000523777 LAMB4A4D0S4 1761 aa21.03■□□□□ 0.96
TRAPPC9-214ENST00000523777 IL6STP40189 918 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC9-214ENST00000523777 WDR63Q8IWG1 891 aa21.03■□□□□ 0.96
TRAPPC9-214ENST00000523777 ZBTB1Q9Y2K1 713 aa21.03■□□□□ 0.96
TRAPPC9-214ENST00000523777 COL24A1Q17RW2 1714 aa21.03■□□□□ 0.96
TRAPPC9-214ENST00000523777 ZNF853P0CG23 659 aa21.02■□□□□ 0.96
TRAPPC9-214ENST00000523777 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.96
TRAPPC9-214ENST00000523777 AMIGO3Q86WK7 504 aa21.02■□□□□ 0.96
TRAPPC9-214ENST00000523777 CHMP4AQ9BY43 222 aa21.02■□□□□ 0.96
TRAPPC9-214ENST00000523777 PPP1R1BQ9UD71 204 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC9-214ENST00000523777 ZPR1O75312 459 aa21.01■□□□□ 0.95
TRAPPC9-214ENST00000523777 HOXB7P09629 217 aa21.01■□□□□ 0.95
TRAPPC9-214ENST00000523777 NLGN1Q8N2Q7 840 aa21.01■□□□□ 0.95
TRAPPC9-214ENST00000523777 ERBB4Q15303 1308 aa21.01■□□□□ 0.95
TRAPPC9-214ENST00000523777 COL15A1P39059 1388 aa21■□□□□ 0.95
TRAPPC9-214ENST00000523777 PTGER2P43116 358 aa21■□□□□ 0.95
TRAPPC9-214ENST00000523777 EIF5P55010 431 aaKnown RBP21■□□□□ 0.95
TRAPPC9-214ENST00000523777 C4AP0C0L4 1744 aa20.99■□□□□ 0.95
TRAPPC9-214ENST00000523777 A1BGP04217 495 aa20.99■□□□□ 0.95
TRAPPC9-214ENST00000523777 SGIP1Q9BQI5 828 aa20.99■□□□□ 0.95
TRAPPC9-214ENST00000523777 MBIPQ9NS73 344 aa20.99■□□□□ 0.95
TRAPPC9-214ENST00000523777 NARFQ9UHQ1 456 aa20.98■□□□□ 0.95
TRAPPC9-214ENST00000523777 USP42Q9H9J4 1324 aaKnown RBP20.98■□□□□ 0.95
TRAPPC9-214ENST00000523777 PRAMEF22A3QJZ6 481 aa20.97■□□□□ 0.95
TRAPPC9-214ENST00000523777 SMIM5Q71RC9 77 aa20.97■□□□□ 0.95
TRAPPC9-214ENST00000523777 ARXQ96QS3 562 aa20.96■□□□□ 0.95
TRAPPC9-214ENST00000523777 SALL2Q9Y467 1007 aaPredicted RBP20.96■□□□□ 0.95
TRAPPC9-214ENST00000523777 GYS1P13807 737 aa20.95■□□□□ 0.94
TRAPPC9-214ENST00000523777 ZNF330Q9Y3S2 320 aaPredicted RBP20.95■□□□□ 0.94
TRAPPC9-214ENST00000523777 RGL2O15211 777 aa20.94■□□□□ 0.94
TRAPPC9-214ENST00000523777 MSL1Q68DK7 614 aa20.94■□□□□ 0.94
TRAPPC9-214ENST00000523777 EIF2S2P20042 333 aaKnown RBP20.93■□□□□ 0.94
TRAPPC9-214ENST00000523777 MYH16Q9H6N6 1097 aa20.93■□□□□ 0.94
TRAPPC9-214ENST00000523777 DUSP27Q5VZP5 1158 aa20.92■□□□□ 0.94
TRAPPC9-214ENST00000523777 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
TRAPPC9-214ENST00000523777 DZIP3Q86Y13 1208 aaKnown RBP20.92■□□□□ 0.94
TRAPPC9-214ENST00000523777 SENP3-EIF4A1A0A087X0R7 540 aa20.91■□□□□ 0.94
TRAPPC9-214ENST00000523777 NBPF26B4DH59 902 aa20.91■□□□□ 0.94
TRAPPC9-214ENST00000523777 NBPF10Q6P3W6 841 aaKnown RBP20.91■□□□□ 0.94
TRAPPC9-214ENST00000523777 NBPF15Q8N660 670 aa20.91■□□□□ 0.94
TRAPPC9-214ENST00000523777 SRP68Q9UHB9 627 aaKnown RBP20.91■□□□□ 0.94
TRAPPC9-214ENST00000523777 ZNF652Q9Y2D9 606 aa20.91■□□□□ 0.94
TRAPPC9-214ENST00000523777 GOLGA2Q08379 1002 aa20.9■□□□□ 0.94
TRAPPC9-214ENST00000523777 HDGFL1Q5TGJ6 251 aa20.9■□□□□ 0.94
TRAPPC9-214ENST00000523777 CLEC4GQ6UXB4 293 aa20.9■□□□□ 0.94
TRAPPC9-214ENST00000523777 PARP3Q9Y6F1 533 aa20.9■□□□□ 0.94
TRAPPC9-214ENST00000523777 MMP10P09238 476 aa20.89■□□□□ 0.93
TRAPPC9-214ENST00000523777 DDX21Q9NR30 783 aaKnown RBP eCLIP20.89■□□□□ 0.93
TRAPPC9-214ENST00000523777 TBC1D2BQ9UPU7 963 aa20.89■□□□□ 0.93
TRAPPC9-214ENST00000523777 ZNF521Q96K83 1311 aa20.88■□□□□ 0.93
TRAPPC9-214ENST00000523777 FKBP8Q14318 412 aa20.88■□□□□ 0.93
TRAPPC9-214ENST00000523777 KRT24Q2M2I5 525 aa20.88■□□□□ 0.93
TRAPPC9-214ENST00000523777 KIF6Q6ZMV9 814 aa20.88■□□□□ 0.93
TRAPPC9-214ENST00000523777 DBF4Q9UBU7 674 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC9-214ENST00000523777 SRCAPQ6ZRS2 3230 aa20.87■□□□□ 0.93
TRAPPC9-214ENST00000523777 SCN7AQ01118 1682 aa20.87■□□□□ 0.93
TRAPPC9-214ENST00000523777 ERVV-1B6SEH8 477 aa20.87■□□□□ 0.93
TRAPPC9-214ENST00000523777 CAMTA2O94983 1202 aa20.87■□□□□ 0.93
TRAPPC9-214ENST00000523777 MYL6BP14649 208 aa20.87■□□□□ 0.93
TRAPPC9-214ENST00000523777 PIP4K2AP48426 406 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC9-214ENST00000523777 TSR2Q969E8 191 aaKnown RBP20.87■□□□□ 0.93
TRAPPC9-214ENST00000523777 FANCIQ9NVI1 1328 aa20.86■□□□□ 0.93
TRAPPC9-214ENST00000523777 TM4SF1P30408 202 aa20.86■□□□□ 0.93
TRAPPC9-214ENST00000523777 CCDC30Q5VVM6 783 aa20.86■□□□□ 0.93
TRAPPC9-214ENST00000523777 HYPKQ9NX55 129 aa20.86■□□□□ 0.93
TRAPPC9-214ENST00000523777 CD2APQ9Y5K6 639 aa20.86■□□□□ 0.93
TRAPPC9-214ENST00000523777 BCORQ6W2J9 1755 aa20.86■□□□□ 0.93
TRAPPC9-214ENST00000523777 E9PSI1 815 aa20.85■□□□□ 0.93
TRAPPC9-214ENST00000523777 PDIA6Q15084 440 aa20.85■□□□□ 0.93
TRAPPC9-214ENST00000523777 C8orf58Q8NAV2 365 aa20.85■□□□□ 0.93
TRAPPC9-214ENST00000523777 FHDC1Q9C0D6 1143 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC9-214ENST00000523777 BCL2L12Q9HB09 334 aa20.85■□□□□ 0.93
TRAPPC9-214ENST00000523777 TWISTNBQ3B726 338 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC9-214ENST00000523777 SYT17Q9BSW7 474 aa20.84■□□□□ 0.93
TRAPPC9-214ENST00000523777 MAP3K15Q6ZN16 1313 aa20.83■□□□□ 0.93
TRAPPC9-214ENST00000523777 ELL2O00472 640 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC9-214ENST00000523777 NFIXQ14938 502 aa20.83■□□□□ 0.93
TRAPPC9-214ENST00000523777 NECTIN2Q92692 538 aa20.83■□□□□ 0.93
TRAPPC9-214ENST00000523777 SETDB2Q96T68 719 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms