RNA–Protein interactions for RNA: ENST00000523315.1

EBF1-209, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 490 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-209ENST00000523315 GPR162Q16538 588 aa18.38■□□□□ 0.53
EBF1-209ENST00000523315 VSIG10Q8N0Z9 540 aa18.38■□□□□ 0.53
EBF1-209ENST00000523315 CICQ96RK0 1608 aaPredicted RBP18.38■□□□□ 0.53
EBF1-209ENST00000523315 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
EBF1-209ENST00000523315 WWC1Q8IX03 1113 aa18.37■□□□□ 0.53
EBF1-209ENST00000523315 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
EBF1-209ENST00000523315 HEG1Q9ULI3 1381 aa18.37■□□□□ 0.53
EBF1-209ENST00000523315 ZNF496Q96IT1 587 aaPredicted RBP18.36■□□□□ 0.53
EBF1-209ENST00000523315 CFAP44Q96MT7 982 aa18.36■□□□□ 0.53
EBF1-209ENST00000523315 TEX13AQ9BXU3 409 aaPredicted RBP18.36■□□□□ 0.53
EBF1-209ENST00000523315 MIS18AQ9NYP9 233 aa18.36■□□□□ 0.53
EBF1-209ENST00000523315 COL24A1Q17RW2 1714 aa18.35■□□□□ 0.53
EBF1-209ENST00000523315 IL16Q14005 1332 aa18.35■□□□□ 0.53
EBF1-209ENST00000523315 TJP1Q07157 1748 aa18.35■□□□□ 0.53
EBF1-209ENST00000523315 CHL1O00533 1208 aa18.34■□□□□ 0.53
EBF1-209ENST00000523315 STARD3NLO95772 234 aa18.34■□□□□ 0.53
EBF1-209ENST00000523315 SSFA2P28290 1259 aa18.34■□□□□ 0.53
EBF1-209ENST00000523315 WDR63Q8IWG1 891 aa18.34■□□□□ 0.53
EBF1-209ENST00000523315 KCNQ3O43525 872 aa18.33■□□□□ 0.52
EBF1-209ENST00000523315 SNRPA1P09661 255 aaKnown RBP18.33■□□□□ 0.52
EBF1-209ENST00000523315 DNAJC10Q8IXB1 793 aa18.33■□□□□ 0.52
EBF1-209ENST00000523315 CNTNAP4Q9C0A0 1308 aa18.32■□□□□ 0.52
EBF1-209ENST00000523315 UBR3Q6ZT12 1888 aa18.32■□□□□ 0.52
EBF1-209ENST00000523315 COL5A3P25940 1745 aaPredicted RBP18.32■□□□□ 0.52
EBF1-209ENST00000523315 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
EBF1-209ENST00000523315 RC3H1Q5TC82 1133 aaKnown RBP18.31■□□□□ 0.52
EBF1-209ENST00000523315 WWC3Q9ULE0 1092 aa18.31■□□□□ 0.52
EBF1-209ENST00000523315 YBX3P16989 372 aaKnown RBP eCLIP18.3■□□□□ 0.52
EBF1-209ENST00000523315 CRKLP46109 303 aaKnown RBP18.3■□□□□ 0.52
EBF1-209ENST00000523315 HNRNPUQ00839 825 aaKnown RBP eCLIP18.3■□□□□ 0.52
EBF1-209ENST00000523315 MYH16Q9H6N6 1097 aa18.3■□□□□ 0.52
EBF1-209ENST00000523315 MBIPQ9NS73 344 aa18.3■□□□□ 0.52
EBF1-209ENST00000523315 CCDC87Q9NVE4 849 aa18.3■□□□□ 0.52
EBF1-209ENST00000523315 RTCBQ9Y3I0 505 aaKnown RBP18.3■□□□□ 0.52
EBF1-209ENST00000523315 ZNF853P0CG23 659 aa18.29■□□□□ 0.52
EBF1-209ENST00000523315 CYP19A1P11511 503 aaPredicted RBP18.29■□□□□ 0.52
EBF1-209ENST00000523315 TRAPPC3LQ5T215 181 aa18.29■□□□□ 0.52
EBF1-209ENST00000523315 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
EBF1-209ENST00000523315 GOLGB1Q14789 3259 aaKnown RBP18.29■□□□□ 0.52
EBF1-209ENST00000523315 LAMB4A4D0S4 1761 aa18.29■□□□□ 0.52
EBF1-209ENST00000523315 ARHGEF1Q92888 912 aaKnown RBP18.28■□□□□ 0.52
EBF1-209ENST00000523315 GIGYF1O75420 1035 aaPredicted RBP18.27■□□□□ 0.52
EBF1-209ENST00000523315 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
EBF1-209ENST00000523315 ZNF784Q8NCA9 323 aaPredicted RBP18.27■□□□□ 0.52
EBF1-209ENST00000523315 CHMP4AQ9BY43 222 aa18.27■□□□□ 0.52
EBF1-209ENST00000523315 CD2APQ9Y5K6 639 aa18.27■□□□□ 0.52
EBF1-209ENST00000523315 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
EBF1-209ENST00000523315 RPS6KA4O75676 772 aa18.26■□□□□ 0.51
EBF1-209ENST00000523315 MMP10P09238 476 aa18.26■□□□□ 0.51
EBF1-209ENST00000523315 HOXB7P09629 217 aa18.26■□□□□ 0.51
EBF1-209ENST00000523315 ADRA2BP18089 450 aa18.26■□□□□ 0.51
EBF1-209ENST00000523315 E9PSI1 815 aa18.25■□□□□ 0.51
EBF1-209ENST00000523315 TSR2Q969E8 191 aaKnown RBP18.25■□□□□ 0.51
EBF1-209ENST00000523315 SOS1Q07889 1333 aaPredicted RBP18.24■□□□□ 0.51
EBF1-209ENST00000523315 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
EBF1-209ENST00000523315 RFC4P35249 363 aa18.24■□□□□ 0.51
EBF1-209ENST00000523315 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
EBF1-209ENST00000523315 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
EBF1-209ENST00000523315 CANXP27824 592 aaKnown RBP18.23■□□□□ 0.51
EBF1-209ENST00000523315 INTS5Q6P9B9 1019 aaKnown RBP18.23■□□□□ 0.51
EBF1-209ENST00000523315 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
EBF1-209ENST00000523315 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
EBF1-209ENST00000523315 COL15A1P39059 1388 aa18.22■□□□□ 0.51
EBF1-209ENST00000523315 A0A087WZG4 1122 aa18.22■□□□□ 0.51
EBF1-209ENST00000523315 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
EBF1-209ENST00000523315 GYS1P13807 737 aa18.22■□□□□ 0.51
EBF1-209ENST00000523315 HDGFL1Q5TGJ6 251 aa18.22■□□□□ 0.51
EBF1-209ENST00000523315 DUSP27Q5VZP5 1158 aa18.22■□□□□ 0.51
EBF1-209ENST00000523315 ZNF330Q9Y3S2 320 aaPredicted RBP18.22■□□□□ 0.51
EBF1-209ENST00000523315 A1BGP04217 495 aa18.21■□□□□ 0.51
EBF1-209ENST00000523315 EIF2S2P20042 333 aaKnown RBP18.21■□□□□ 0.51
EBF1-209ENST00000523315 MYH14Q7Z406 1995 aaKnown RBP18.21■□□□□ 0.5
EBF1-209ENST00000523315 GRIN3BO60391 1043 aa18.2■□□□□ 0.5
EBF1-209ENST00000523315 IL6STP40189 918 aaPredicted RBP18.2■□□□□ 0.5
EBF1-209ENST00000523315 KRT24Q2M2I5 525 aa18.2■□□□□ 0.5
EBF1-209ENST00000523315 NLGN1Q8N2Q7 840 aa18.2■□□□□ 0.5
EBF1-209ENST00000523315 ZBED9Q6R2W3 1325 aa18.2■□□□□ 0.5
EBF1-209ENST00000523315 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
EBF1-209ENST00000523315 ZPR1O75312 459 aa18.18■□□□□ 0.5
EBF1-209ENST00000523315 FKBP8Q14318 412 aa18.18■□□□□ 0.5
EBF1-209ENST00000523315 TWISTNBQ3B726 338 aaPredicted RBP18.18■□□□□ 0.5
EBF1-209ENST00000523315 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
EBF1-209ENST00000523315 NECTIN2Q92692 538 aa18.18■□□□□ 0.5
EBF1-209ENST00000523315 EIF5P55010 431 aaKnown RBP18.17■□□□□ 0.5
EBF1-209ENST00000523315 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
EBF1-209ENST00000523315 SLFN5Q08AF3 891 aa18.17■□□□□ 0.5
EBF1-209ENST00000523315 CCDC30Q5VVM6 783 aa18.17■□□□□ 0.5
EBF1-209ENST00000523315 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
EBF1-209ENST00000523315 CHD4Q14839 1912 aa18.16■□□□□ 0.5
EBF1-209ENST00000523315 C4AP0C0L4 1744 aa18.16■□□□□ 0.5
EBF1-209ENST00000523315 MYL6BP14649 208 aa18.16■□□□□ 0.5
EBF1-209ENST00000523315 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
EBF1-209ENST00000523315 STK31Q9BXU1 1019 aa18.16■□□□□ 0.5
EBF1-209ENST00000523315 PARP3Q9Y6F1 533 aa18.16■□□□□ 0.5
EBF1-209ENST00000523315 USP42Q9H9J4 1324 aaKnown RBP18.16■□□□□ 0.5
EBF1-209ENST00000523315 A0A0G2JLW4 131 aa18.15■□□□□ 0.5
EBF1-209ENST00000523315 NBPF26B4DH59 902 aa18.15■□□□□ 0.5
EBF1-209ENST00000523315 NBPF10Q6P3W6 841 aaKnown RBP18.15■□□□□ 0.5
EBF1-209ENST00000523315 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
EBF1-209ENST00000523315 NBPF15Q8N660 670 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms