RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 SUDS3Q9H7L9 328 aaPredicted RBP14.29□□□□□ -0.12
EXTL3-214ENST00000523271 HMGB2P26583 209 aaKnown RBP14.29□□□□□ -0.12
EXTL3-214ENST00000523271 PRPHP41219 470 aa14.29□□□□□ -0.12
EXTL3-214ENST00000523271 SELENOOQ9BVL4 669 aa14.29□□□□□ -0.12
EXTL3-214ENST00000523271 ALDH3A1P30838 453 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 DNA2P51530 1060 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 PYM1Q9BRP8 204 aaKnown RBP14.28□□□□□ -0.12
EXTL3-214ENST00000523271 NOP2P46087 812 aaKnown RBP14.28□□□□□ -0.12
EXTL3-214ENST00000523271 GOLIM4O00461 696 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 PPFIA2O75334 1257 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 CCDC121Q6ZUS5 278 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 MPNDQ8N594 471 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 UBA5Q9GZZ9 404 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 CASQ2O14958 399 aaPredicted RBP14.28□□□□□ -0.12
EXTL3-214ENST00000523271 VCX3BQ9H321 246 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 PRKCSHP14314 528 aaPredicted RBP14.28□□□□□ -0.12
EXTL3-214ENST00000523271 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 EPSTI1Q96J88 318 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 OPA1O60313 960 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 CCT4P50991 539 aaKnown RBP14.28□□□□□ -0.12
EXTL3-214ENST00000523271 AMPD3Q01432 767 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 KLHL10Q6JEL2 608 aa14.28□□□□□ -0.12
EXTL3-214ENST00000523271 TRERF1Q96PN7 1200 aa14.27□□□□□ -0.12
EXTL3-214ENST00000523271 CCDC96Q2M329 555 aa14.27□□□□□ -0.12
EXTL3-214ENST00000523271 PANK1Q8TE04 598 aa14.27□□□□□ -0.12
EXTL3-214ENST00000523271 CUL5Q93034 780 aa14.27□□□□□ -0.12
EXTL3-214ENST00000523271 TCHPQ9BT92 498 aa14.27□□□□□ -0.12
EXTL3-214ENST00000523271 TBC1D5Q92609 795 aa14.27□□□□□ -0.12
EXTL3-214ENST00000523271 LUC7L2Q9Y383 392 aaKnown RBP14.27□□□□□ -0.12
EXTL3-214ENST00000523271 CNGA1P29973 690 aa14.27□□□□□ -0.13
EXTL3-214ENST00000523271 TUBB4BP68371 445 aa14.27□□□□□ -0.13
EXTL3-214ENST00000523271 PRKRIP1Q9H875 184 aaPredicted RBP14.27□□□□□ -0.13
EXTL3-214ENST00000523271 SYCE3A1L190 88 aa14.27□□□□□ -0.13
EXTL3-214ENST00000523271 PRC1O43663 620 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 RFC1P35251 1148 aaPredicted RBP14.26□□□□□ -0.13
EXTL3-214ENST00000523271 CEP57Q86XR8 500 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 GAS2L2Q8NHY3 880 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
EXTL3-214ENST00000523271 STMN2Q93045 179 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 TMOD2Q9NZR1 351 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 TTC31Q49AM3 519 aaPredicted RBP14.26□□□□□ -0.13
EXTL3-214ENST00000523271 CCDC144CPQ8IYA2 1237 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 CCDC63Q8NA47 563 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 OTUD6BQ8N6M0 293 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 SF3B2Q13435 895 aaKnown RBP14.26□□□□□ -0.13
EXTL3-214ENST00000523271 LRSAM1Q6UWE0 723 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 ERCC6LQ2NKX8 1250 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 NBPF1Q3BBV0 1214 aa14.26□□□□□ -0.13
EXTL3-214ENST00000523271 DZIP1Q86YF9 867 aaKnown RBP14.25□□□□□ -0.13
EXTL3-214ENST00000523271 KRT222Q8N1A0 295 aa14.25□□□□□ -0.13
EXTL3-214ENST00000523271 ZNF526Q8TF50 670 aaPredicted RBP14.25□□□□□ -0.13
EXTL3-214ENST00000523271 SYNCQ9H7C4 482 aa14.25□□□□□ -0.13
EXTL3-214ENST00000523271 ARFGAP3Q9NP61 516 aa14.25□□□□□ -0.13
EXTL3-214ENST00000523271 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
EXTL3-214ENST00000523271 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
EXTL3-214ENST00000523271 FKBP4Q02790 459 aaKnown RBP eCLIP14.25□□□□□ -0.13
EXTL3-214ENST00000523271 SNW1Q13573 536 aaKnown RBP14.25□□□□□ -0.13
EXTL3-214ENST00000523271 JAKMIP2Q96AA8 810 aa14.25□□□□□ -0.13
EXTL3-214ENST00000523271 RABGAP1Q9Y3P9 1069 aa14.25□□□□□ -0.13
EXTL3-214ENST00000523271 A0A087WZG4 1122 aa14.25□□□□□ -0.13
EXTL3-214ENST00000523271 MCM5P33992 734 aa14.25□□□□□ -0.13
EXTL3-214ENST00000523271 ATF3P18847 181 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 CFAP157Q5JU67 520 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 IL27Q8NEV9 243 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 CCDC171Q6TFL3 1326 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 ATP11AP98196 1134 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 TRIM7Q9C029 511 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 CIB2O75838 187 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 PPFIBP2Q8ND30 876 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 TXNDC16Q9P2K2 825 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 ATP2A2P16615 1042 aaKnown RBP14.24□□□□□ -0.13
EXTL3-214ENST00000523271 CAMK4Q16566 473 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 CACNA2D3Q8IZS8 1091 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 MINK1Q8N4C8 1332 aaPredicted RBP14.24□□□□□ -0.13
EXTL3-214ENST00000523271 CCDC7Q96M83 1385 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 A0A1B0GUA9 196 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 LACTBP83111 547 aaPredicted RBP14.24□□□□□ -0.13
EXTL3-214ENST00000523271 C16orf45Q96MC5 204 aaPredicted RBP14.24□□□□□ -0.13
EXTL3-214ENST00000523271 MTIF2P46199 727 aaKnown RBP14.24□□□□□ -0.13
EXTL3-214ENST00000523271 SETDB1Q15047 1291 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 GBP6Q6ZN66 633 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 USP37Q86T82 979 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 NCAPGQ9BPX3 1015 aa14.24□□□□□ -0.13
EXTL3-214ENST00000523271 RNF168Q8IYW5 571 aaPredicted RBP14.23□□□□□ -0.13
EXTL3-214ENST00000523271 MGEA5O60502 916 aa14.23□□□□□ -0.13
EXTL3-214ENST00000523271 NUF2Q9BZD4 464 aa14.23□□□□□ -0.13
EXTL3-214ENST00000523271 ATP2C2O75185 946 aa14.23□□□□□ -0.13
EXTL3-214ENST00000523271 BAG4O95429 457 aaKnown RBP14.23□□□□□ -0.13
EXTL3-214ENST00000523271 JAKMIP1Q96N16 626 aaKnown RBP14.23□□□□□ -0.13
EXTL3-214ENST00000523271 MROH2BQ7Z745 1585 aa14.23□□□□□ -0.13
EXTL3-214ENST00000523271 CAVIN2O95810 425 aa14.23□□□□□ -0.13
EXTL3-214ENST00000523271 CCDC129Q6ZRS4 1044 aa14.23□□□□□ -0.13
EXTL3-214ENST00000523271 HMOX1P09601 288 aa14.22□□□□□ -0.13
EXTL3-214ENST00000523271 RAB3IPQ96QF0 476 aaPredicted RBP14.22□□□□□ -0.13
EXTL3-214ENST00000523271 CALML4Q96GE6 196 aa14.22□□□□□ -0.13
EXTL3-214ENST00000523271 EBAG9O00559 213 aa14.22□□□□□ -0.13
EXTL3-214ENST00000523271 SH2D4BQ5SQS7 431 aa14.22□□□□□ -0.13
EXTL3-214ENST00000523271 PRR16Q569H4 304 aa14.22□□□□□ -0.13
EXTL3-214ENST00000523271 KANK3Q6NY19 840 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms