RNA–Protein interactions for RNA: ENST00000522880.1

SFTPC-208, Transcript of surfactant protein C, humanhuman

TSL 3

Gene SFTPC, Length 1,000 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-208ENST00000522880 TAF1LQ8IZX4 1826 aa19.21■□□□□ 0.67
SFTPC-208ENST00000522880 MYH16Q9H6N6 1097 aa19.2■□□□□ 0.66
SFTPC-208ENST00000522880 RPS6KA4O75676 772 aa19.19■□□□□ 0.66
SFTPC-208ENST00000522880 HOXB7P09629 217 aa19.19■□□□□ 0.66
SFTPC-208ENST00000522880 ADRA2BP18089 450 aa19.19■□□□□ 0.66
SFTPC-208ENST00000522880 INTS5Q6P9B9 1019 aaKnown RBP19.19■□□□□ 0.66
SFTPC-208ENST00000522880 COL5A3P25940 1745 aaPredicted RBP19.19■□□□□ 0.66
SFTPC-208ENST00000522880 HNRNPUQ00839 825 aaKnown RBP eCLIP19.18■□□□□ 0.66
SFTPC-208ENST00000522880 GOLGA2Q08379 1002 aa19.18■□□□□ 0.66
SFTPC-208ENST00000522880 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
SFTPC-208ENST00000522880 PNPLA7Q6ZV29 1317 aa19.18■□□□□ 0.66
SFTPC-208ENST00000522880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.17■□□□□ 0.66
SFTPC-208ENST00000522880 PRAMEF22A3QJZ6 481 aa19.17■□□□□ 0.66
SFTPC-208ENST00000522880 E9PSI1 815 aa19.16■□□□□ 0.66
SFTPC-208ENST00000522880 PHF14O94880 888 aa19.16■□□□□ 0.66
SFTPC-208ENST00000522880 TRAPPC3LQ5T215 181 aa19.16■□□□□ 0.66
SFTPC-208ENST00000522880 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
SFTPC-208ENST00000522880 CHMP4AQ9BY43 222 aa19.16■□□□□ 0.66
SFTPC-208ENST00000522880 ZBTB1Q9Y2K1 713 aa19.16■□□□□ 0.66
SFTPC-208ENST00000522880 SOS1Q07889 1333 aaPredicted RBP19.16■□□□□ 0.66
SFTPC-208ENST00000522880 FANCIQ9NVI1 1328 aa19.16■□□□□ 0.66
SFTPC-208ENST00000522880 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
SFTPC-208ENST00000522880 SLC16A10Q8TF71 515 aa19.15■□□□□ 0.66
SFTPC-208ENST00000522880 ERBB4Q15303 1308 aa19.15■□□□□ 0.66
SFTPC-208ENST00000522880 MSH5O43196 834 aa19.14■□□□□ 0.65
SFTPC-208ENST00000522880 A1BGP04217 495 aa19.14■□□□□ 0.65
SFTPC-208ENST00000522880 CANXP27824 592 aaKnown RBP19.14■□□□□ 0.65
SFTPC-208ENST00000522880 IL6STP40189 918 aaPredicted RBP19.14■□□□□ 0.65
SFTPC-208ENST00000522880 KRT24Q2M2I5 525 aa19.14■□□□□ 0.65
SFTPC-208ENST00000522880 DUSP27Q5VZP5 1158 aa19.14■□□□□ 0.65
SFTPC-208ENST00000522880 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.65
SFTPC-208ENST00000522880 PPP1R1BQ9UD71 204 aaPredicted RBP19.14■□□□□ 0.65
SFTPC-208ENST00000522880 AMIGO3Q86WK7 504 aa19.13■□□□□ 0.65
SFTPC-208ENST00000522880 SPINK5Q9NQ38 1064 aaPredicted RBP19.13■□□□□ 0.65
SFTPC-208ENST00000522880 QSER1Q2KHR3 1735 aa19.13■□□□□ 0.65
SFTPC-208ENST00000522880 A0A087WZG4 1122 aa19.12■□□□□ 0.65
SFTPC-208ENST00000522880 EIF2S2P20042 333 aaKnown RBP19.12■□□□□ 0.65
SFTPC-208ENST00000522880 RFC4P35249 363 aa19.12■□□□□ 0.65
SFTPC-208ENST00000522880 EIF5P55010 431 aaKnown RBP19.12■□□□□ 0.65
SFTPC-208ENST00000522880 HDGFL1Q5TGJ6 251 aa19.12■□□□□ 0.65
SFTPC-208ENST00000522880 ARHGEF1Q92888 912 aaKnown RBP19.12■□□□□ 0.65
SFTPC-208ENST00000522880 LAMB4A4D0S4 1761 aa19.11■□□□□ 0.65
SFTPC-208ENST00000522880 COL15A1P39059 1388 aa19.11■□□□□ 0.65
SFTPC-208ENST00000522880 SLFN5Q08AF3 891 aa19.11■□□□□ 0.65
SFTPC-208ENST00000522880 C8orf58Q8NAV2 365 aa19.11■□□□□ 0.65
SFTPC-208ENST00000522880 UBR3Q6ZT12 1888 aa19.11■□□□□ 0.65
SFTPC-208ENST00000522880 MYH14Q7Z406 1995 aaKnown RBP19.1■□□□□ 0.65
SFTPC-208ENST00000522880 ZBED9Q6R2W3 1325 aa19.1■□□□□ 0.65
SFTPC-208ENST00000522880 PDGFDQ9GZP0 370 aaPredicted RBP19.1■□□□□ 0.65
SFTPC-208ENST00000522880 MTFR1LQ9H019 292 aa19.1■□□□□ 0.65
SFTPC-208ENST00000522880 ZNF330Q9Y3S2 320 aaPredicted RBP19.1■□□□□ 0.65
SFTPC-208ENST00000522880 NBPF26B4DH59 902 aa19.09■□□□□ 0.65
SFTPC-208ENST00000522880 ELL2O00472 640 aaPredicted RBP19.09■□□□□ 0.65
SFTPC-208ENST00000522880 TWISTNBQ3B726 338 aaPredicted RBP19.09■□□□□ 0.65
SFTPC-208ENST00000522880 NBPF10Q6P3W6 841 aaKnown RBP19.09■□□□□ 0.65
SFTPC-208ENST00000522880 SMIM5Q71RC9 77 aa19.09■□□□□ 0.65
SFTPC-208ENST00000522880 NBPF15Q8N660 670 aa19.09■□□□□ 0.65
SFTPC-208ENST00000522880 CASZ1Q86V15 1759 aa19.09■□□□□ 0.65
SFTPC-208ENST00000522880 ZPR1O75312 459 aa19.08■□□□□ 0.64
SFTPC-208ENST00000522880 EXOSC9Q06265 439 aaKnown RBP19.08■□□□□ 0.64
SFTPC-208ENST00000522880 SPON1Q9HCB6 807 aa19.08■□□□□ 0.64
SFTPC-208ENST00000522880 DBF4Q9UBU7 674 aaPredicted RBP19.08■□□□□ 0.64
SFTPC-208ENST00000522880 TUBGCP6Q96RT7 1819 aa19.08■□□□□ 0.64
SFTPC-208ENST00000522880 USP42Q9H9J4 1324 aaKnown RBP19.07■□□□□ 0.64
SFTPC-208ENST00000522880 ZBTB7AO95365 584 aa19.07■□□□□ 0.64
SFTPC-208ENST00000522880 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
SFTPC-208ENST00000522880 CCDC30Q5VVM6 783 aa19.07■□□□□ 0.64
SFTPC-208ENST00000522880 TSPYL6Q8N831 410 aa19.07■□□□□ 0.64
SFTPC-208ENST00000522880 DDX21Q9NR30 783 aaKnown RBP eCLIP19.07■□□□□ 0.64
SFTPC-208ENST00000522880 NARFQ9UHQ1 456 aa19.07■□□□□ 0.64
SFTPC-208ENST00000522880 DCAF8L1A6NGE4 600 aa19.06■□□□□ 0.64
SFTPC-208ENST00000522880 MYL6BP14649 208 aa19.06■□□□□ 0.64
SFTPC-208ENST00000522880 TRMT2AQ8IZ69 625 aaKnown RBP19.06■□□□□ 0.64
SFTPC-208ENST00000522880 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
SFTPC-208ENST00000522880 CDCA7LQ96GN5 454 aa19.06■□□□□ 0.64
SFTPC-208ENST00000522880 PDIA6Q15084 440 aa19.05■□□□□ 0.64
SFTPC-208ENST00000522880 DZIP3Q86Y13 1208 aaKnown RBP19.05■□□□□ 0.64
SFTPC-208ENST00000522880 NLGN1Q8N2Q7 840 aa19.05■□□□□ 0.64
SFTPC-208ENST00000522880 ARXQ96QS3 562 aa19.05■□□□□ 0.64
SFTPC-208ENST00000522880 CHPF2Q9P2E5 772 aa19.05■□□□□ 0.64
SFTPC-208ENST00000522880 STK31Q9BXU1 1019 aa19.04■□□□□ 0.64
SFTPC-208ENST00000522880 HYPKQ9NX55 129 aa19.04■□□□□ 0.64
SFTPC-208ENST00000522880 RGL2O15211 777 aa19.03■□□□□ 0.64
SFTPC-208ENST00000522880 VAMP4O75379 141 aa19.03■□□□□ 0.64
SFTPC-208ENST00000522880 GYS1P13807 737 aa19.03■□□□□ 0.64
SFTPC-208ENST00000522880 USPL1Q5W0Q7 1092 aa19.03■□□□□ 0.64
SFTPC-208ENST00000522880 LRP10Q7Z4F1 713 aa19.03■□□□□ 0.64
SFTPC-208ENST00000522880 SRP68Q9UHB9 627 aaKnown RBP19.03■□□□□ 0.64
SFTPC-208ENST00000522880 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
SFTPC-208ENST00000522880 ATF5Q9Y2D1 282 aaPredicted RBP19.03■□□□□ 0.64
SFTPC-208ENST00000522880 POLD1P28340 1107 aa19.02■□□□□ 0.64
SFTPC-208ENST00000522880 PROSER3Q2NL68 480 aa19.02■□□□□ 0.64
SFTPC-208ENST00000522880 KIF6Q6ZMV9 814 aa19.02■□□□□ 0.64
SFTPC-208ENST00000522880 ZNF652Q9Y2D9 606 aa19.02■□□□□ 0.64
SFTPC-208ENST00000522880 CAMTA2O94983 1202 aa19.01■□□□□ 0.63
SFTPC-208ENST00000522880 CT47B1P0C2W7 299 aaPredicted RBP19.01■□□□□ 0.63
SFTPC-208ENST00000522880 MSL1Q68DK7 614 aa19.01■□□□□ 0.63
SFTPC-208ENST00000522880 ZNF428Q96B54 188 aa19.01■□□□□ 0.63
SFTPC-208ENST00000522880 C4AP0C0L4 1744 aa19■□□□□ 0.63
SFTPC-208ENST00000522880 ERVV-1B6SEH8 477 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms