RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 CFHP08603 1231 aa11.56□□□□□ -0.56
PVT1-213ENST00000522414 PRDM11Q9NQV5 511 aa11.56□□□□□ -0.56
PVT1-213ENST00000522414 SLC10A3P09131 477 aa11.55□□□□□ -0.56
PVT1-213ENST00000522414 SRPK2P78362 688 aaKnown RBP11.55□□□□□ -0.56
PVT1-213ENST00000522414 ABTB2Q8N961 1025 aa11.55□□□□□ -0.56
PVT1-213ENST00000522414 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
PVT1-213ENST00000522414 BRWD3Q6RI45 1802 aa11.54□□□□□ -0.56
PVT1-213ENST00000522414 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
PVT1-213ENST00000522414 ST8SIA5O15466 376 aa11.54□□□□□ -0.56
PVT1-213ENST00000522414 SF3B2Q13435 895 aaKnown RBP11.54□□□□□ -0.56
PVT1-213ENST00000522414 SPATA31A5Q5VU36 1347 aa11.54□□□□□ -0.56
PVT1-213ENST00000522414 SPATA31A7Q8IWB4 1347 aa11.54□□□□□ -0.56
PVT1-213ENST00000522414 KIAA0232Q92628 1395 aa11.54□□□□□ -0.56
PVT1-213ENST00000522414 BLMP54132 1417 aaPredicted RBP11.53□□□□□ -0.56
PVT1-213ENST00000522414 ADH1BP00325 375 aa11.53□□□□□ -0.56
PVT1-213ENST00000522414 EVA1CP58658 441 aa11.53□□□□□ -0.56
PVT1-213ENST00000522414 KMT5BQ4FZB7 885 aa11.53□□□□□ -0.56
PVT1-213ENST00000522414 LCE2AQ5TA79 106 aaPredicted RBP11.53□□□□□ -0.56
PVT1-213ENST00000522414 RBM46Q8TBY0 533 aaKnown RBP11.53□□□□□ -0.56
PVT1-213ENST00000522414 CABP1Q9NZU7 370 aa11.53□□□□□ -0.56
PVT1-213ENST00000522414 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
PVT1-213ENST00000522414 CENPJQ9HC77 1338 aaPredicted RBP11.52□□□□□ -0.57
PVT1-213ENST00000522414 POLR3AO14802 1390 aaPredicted RBP11.52□□□□□ -0.57
PVT1-213ENST00000522414 COL14A1Q05707 1796 aaKnown RBP11.51□□□□□ -0.57
PVT1-213ENST00000522414 TRPM1Q7Z4N2 1603 aa11.51□□□□□ -0.57
PVT1-213ENST00000522414 PHRF1Q9P1Y6 1649 aaKnown RBP11.51□□□□□ -0.57
PVT1-213ENST00000522414 AAASQ9NRG9 546 aa11.51□□□□□ -0.57
PVT1-213ENST00000522414 GCP02774 474 aa11.5□□□□□ -0.57
PVT1-213ENST00000522414 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
PVT1-213ENST00000522414 ZBTB7CA1YPR0 619 aa11.49□□□□□ -0.57
PVT1-213ENST00000522414 LARP1Q6PKG0 1096 aaKnown RBP11.49□□□□□ -0.57
PVT1-213ENST00000522414 NLRP13Q86W25 1043 aa11.49□□□□□ -0.57
PVT1-213ENST00000522414 SLC6A16Q9GZN6 736 aa11.49□□□□□ -0.57
PVT1-213ENST00000522414 PKD2L1Q9P0L9 805 aa11.49□□□□□ -0.57
PVT1-213ENST00000522414 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
PVT1-213ENST00000522414 PPIP5K1Q6PFW1 1433 aa11.48□□□□□ -0.57
PVT1-213ENST00000522414 THSD7AQ9UPZ6 1657 aa11.47□□□□□ -0.57
PVT1-213ENST00000522414 NR1I2O75469 434 aa11.47□□□□□ -0.57
PVT1-213ENST00000522414 TRIM37O94972 964 aa11.47□□□□□ -0.57
PVT1-213ENST00000522414 BAG6P46379 1132 aa11.47□□□□□ -0.57
PVT1-213ENST00000522414 TREML4Q6UXN2 200 aa11.47□□□□□ -0.57
PVT1-213ENST00000522414 NRKQ7Z2Y5 1582 aa11.46□□□□□ -0.57
PVT1-213ENST00000522414 SCUBE3Q8IX30 993 aa11.46□□□□□ -0.57
PVT1-213ENST00000522414 ARHGEF1Q92888 912 aaKnown RBP11.46□□□□□ -0.57
PVT1-213ENST00000522414 LMO7Q8WWI1 1683 aa11.46□□□□□ -0.58
PVT1-213ENST00000522414 BRD4O60885 1362 aaPredicted RBP11.45□□□□□ -0.58
PVT1-213ENST00000522414 EVC2Q86UK5 1308 aa11.45□□□□□ -0.58
PVT1-213ENST00000522414 PDE3BQ13370 1112 aa11.45□□□□□ -0.58
PVT1-213ENST00000522414 EZH2Q15910 746 aaKnown RBP11.45□□□□□ -0.58
PVT1-213ENST00000522414 PUS10Q3MIT2 529 aaKnown RBP11.45□□□□□ -0.58
PVT1-213ENST00000522414 KCNV2Q8TDN2 545 aa11.45□□□□□ -0.58
PVT1-213ENST00000522414 DACH1Q9UI36 760 aa11.45□□□□□ -0.58
PVT1-213ENST00000522414 CAMTA1Q9Y6Y1 1673 aa11.45□□□□□ -0.58
PVT1-213ENST00000522414 USP19O94966 1318 aa11.44□□□□□ -0.58
PVT1-213ENST00000522414 FAM196AQ6ZSG2 479 aa11.44□□□□□ -0.58
PVT1-213ENST00000522414 BARGINQ6ZT62 677 aa11.44□□□□□ -0.58
PVT1-213ENST00000522414 TCP11L2Q8N4U5 519 aa11.44□□□□□ -0.58
PVT1-213ENST00000522414 ROCK2O75116 1388 aaKnown RBP11.43□□□□□ -0.58
PVT1-213ENST00000522414 APBA3O96018 575 aa11.43□□□□□ -0.58
PVT1-213ENST00000522414 FOXC1Q12948 553 aa11.43□□□□□ -0.58
PVT1-213ENST00000522414 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
PVT1-213ENST00000522414 CPDO75976 1380 aa11.42□□□□□ -0.58
PVT1-213ENST00000522414 R3HDM1Q15032 1099 aaKnown RBP11.42□□□□□ -0.58
PVT1-213ENST00000522414 CAMKK2Q96RR4 588 aa11.42□□□□□ -0.58
PVT1-213ENST00000522414 SBNO2Q9Y2G9 1366 aa11.41□□□□□ -0.58
PVT1-213ENST00000522414 TTC21BQ7Z4L5 1316 aa11.41□□□□□ -0.58
PVT1-213ENST00000522414 SLIT3O75094 1523 aa11.41□□□□□ -0.58
PVT1-213ENST00000522414 USP54Q70EL1 1684 aa11.41□□□□□ -0.58
PVT1-213ENST00000522414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.41□□□□□ -0.58
PVT1-213ENST00000522414 USP6P35125 1406 aa11.41□□□□□ -0.58
PVT1-213ENST00000522414 AKAP12Q02952 1782 aa11.41□□□□□ -0.58
PVT1-213ENST00000522414 PIK3C2AO00443 1686 aa11.4□□□□□ -0.58
PVT1-213ENST00000522414 TOM1L2Q6ZVM7 507 aa11.4□□□□□ -0.58
PVT1-213ENST00000522414 PXYLP1Q8TE99 480 aa11.4□□□□□ -0.58
PVT1-213ENST00000522414 SPSB2Q99619 263 aa11.4□□□□□ -0.58
PVT1-213ENST00000522414 CARD11Q9BXL7 1154 aa11.4□□□□□ -0.58
PVT1-213ENST00000522414 ARHGEF25Q86VW2 580 aa11.39□□□□□ -0.59
PVT1-213ENST00000522414 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.39□□□□□ -0.59
PVT1-213ENST00000522414 TNS1Q9HBL0 1735 aaKnown RBP11.39□□□□□ -0.59
PVT1-213ENST00000522414 THRAP3Q9Y2W1 955 aaKnown RBP11.39□□□□□ -0.59
PVT1-213ENST00000522414 RGPD1P0DJD0 1748 aa11.38□□□□□ -0.59
PVT1-213ENST00000522414 DISP2A7MBM2 1401 aa11.38□□□□□ -0.59
PVT1-213ENST00000522414 PTF1AQ7RTS3 328 aa11.38□□□□□ -0.59
PVT1-213ENST00000522414 CRIPAKQ8N1N5 446 aa11.38□□□□□ -0.59
PVT1-213ENST00000522414 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
PVT1-213ENST00000522414 SLC12A5Q9H2X9 1139 aa11.38□□□□□ -0.59
PVT1-213ENST00000522414 TOR4AQ9NXH8 423 aa11.38□□□□□ -0.59
PVT1-213ENST00000522414 AATKQ6ZMQ8 1374 aa11.38□□□□□ -0.59
PVT1-213ENST00000522414 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
PVT1-213ENST00000522414 MON2Q7Z3U7 1717 aa11.38□□□□□ -0.59
PVT1-213ENST00000522414 COL18A1P39060 1754 aa11.37□□□□□ -0.59
PVT1-213ENST00000522414 ABCC6O95255 1503 aa11.36□□□□□ -0.59
PVT1-213ENST00000522414 PARP4Q9UKK3 1724 aaKnown RBP11.36□□□□□ -0.59
PVT1-213ENST00000522414 DDB1Q16531 1140 aa11.36□□□□□ -0.59
PVT1-213ENST00000522414 KCNH5Q8NCM2 988 aa11.36□□□□□ -0.59
PVT1-213ENST00000522414 KTN1Q86UP2 1357 aaKnown RBP11.36□□□□□ -0.59
PVT1-213ENST00000522414 CRB1P82279 1406 aa11.35□□□□□ -0.59
PVT1-213ENST00000522414 CPSF1Q10570 1443 aaKnown RBP11.35□□□□□ -0.59
PVT1-213ENST00000522414 FCHSD2O94868 740 aa11.35□□□□□ -0.59
PVT1-213ENST00000522414 AVPP01185 164 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms