RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 WDR63Q8IWG1 891 aa16.13■□□□□ 0.17
CLK4-208ENST00000520957 CCDC87Q9NVE4 849 aa16.13■□□□□ 0.17
CLK4-208ENST00000520957 CNTNAP4Q9C0A0 1308 aa16.13■□□□□ 0.17
CLK4-208ENST00000520957 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
CLK4-208ENST00000520957 ZBTB7AO95365 584 aa16.12■□□□□ 0.17
CLK4-208ENST00000520957 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
CLK4-208ENST00000520957 NECTIN2Q92692 538 aa16.12■□□□□ 0.17
CLK4-208ENST00000520957 ARHGEF1Q92888 912 aaKnown RBP16.12■□□□□ 0.17
CLK4-208ENST00000520957 TEX13AQ9BXU3 409 aaPredicted RBP16.12■□□□□ 0.17
CLK4-208ENST00000520957 RTCBQ9Y3I0 505 aaKnown RBP16.12■□□□□ 0.17
CLK4-208ENST00000520957 NBPF26B4DH59 902 aa16.11■□□□□ 0.17
CLK4-208ENST00000520957 NBPF10Q6P3W6 841 aaKnown RBP16.11■□□□□ 0.17
CLK4-208ENST00000520957 NBPF15Q8N660 670 aa16.11■□□□□ 0.17
CLK4-208ENST00000520957 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
CLK4-208ENST00000520957 TSPYL6Q8N831 410 aa16.11■□□□□ 0.17
CLK4-208ENST00000520957 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
CLK4-208ENST00000520957 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
CLK4-208ENST00000520957 C4BP0C0L5 1744 aa16.1■□□□□ 0.17
CLK4-208ENST00000520957 IL16Q14005 1332 aa16.1■□□□□ 0.17
CLK4-208ENST00000520957 TRAPPC3LQ5T215 181 aa16.1■□□□□ 0.17
CLK4-208ENST00000520957 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
CLK4-208ENST00000520957 C5P01031 1676 aa16.1■□□□□ 0.17
CLK4-208ENST00000520957 SSFA2P28290 1259 aa16.09■□□□□ 0.17
CLK4-208ENST00000520957 HNRNPUQ00839 825 aaKnown RBP eCLIP16.09■□□□□ 0.17
CLK4-208ENST00000520957 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
CLK4-208ENST00000520957 NGEFQ8N5V2 710 aa16.09■□□□□ 0.17
CLK4-208ENST00000520957 ZNF330Q9Y3S2 320 aaPredicted RBP16.09■□□□□ 0.17
CLK4-208ENST00000520957 TJP1Q07157 1748 aa16.09■□□□□ 0.17
CLK4-208ENST00000520957 MSL1Q68DK7 614 aa16.08■□□□□ 0.17
CLK4-208ENST00000520957 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.17
CLK4-208ENST00000520957 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.16
CLK4-208ENST00000520957 FANCIQ9NVI1 1328 aa16.08■□□□□ 0.16
CLK4-208ENST00000520957 ANXA1P04083 346 aa16.08■□□□□ 0.16
CLK4-208ENST00000520957 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.16
CLK4-208ENST00000520957 EIF5P55010 431 aaKnown RBP16.08■□□□□ 0.16
CLK4-208ENST00000520957 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.16
CLK4-208ENST00000520957 MYH14Q7Z406 1995 aaKnown RBP16.07■□□□□ 0.16
CLK4-208ENST00000520957 KDM3BQ7LBC6 1761 aa16.07■□□□□ 0.16
CLK4-208ENST00000520957 PDIA6Q15084 440 aa16.07■□□□□ 0.16
CLK4-208ENST00000520957 PROSER3Q2NL68 480 aa16.07■□□□□ 0.16
CLK4-208ENST00000520957 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
CLK4-208ENST00000520957 MYL6BP14649 208 aa16.06■□□□□ 0.16
CLK4-208ENST00000520957 RFC4P35249 363 aa16.06■□□□□ 0.16
CLK4-208ENST00000520957 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
CLK4-208ENST00000520957 FLAD1Q8NFF5 587 aa16.06■□□□□ 0.16
CLK4-208ENST00000520957 TBC1D2BQ9UPU7 963 aa16.06■□□□□ 0.16
CLK4-208ENST00000520957 EXOSC9Q06265 439 aaKnown RBP16.05■□□□□ 0.16
CLK4-208ENST00000520957 ARXQ96QS3 562 aa16.05■□□□□ 0.16
CLK4-208ENST00000520957 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
CLK4-208ENST00000520957 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
CLK4-208ENST00000520957 IL6STP40189 918 aaPredicted RBP16.05■□□□□ 0.16
CLK4-208ENST00000520957 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
CLK4-208ENST00000520957 ADRA2BP18089 450 aa16.04■□□□□ 0.16
CLK4-208ENST00000520957 PTGER2P43116 358 aa16.04■□□□□ 0.16
CLK4-208ENST00000520957 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
CLK4-208ENST00000520957 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
CLK4-208ENST00000520957 MTFR1LQ9H019 292 aa16.04■□□□□ 0.16
CLK4-208ENST00000520957 GYS1P13807 737 aa16.03■□□□□ 0.16
CLK4-208ENST00000520957 LRP10Q7Z4F1 713 aa16.03■□□□□ 0.16
CLK4-208ENST00000520957 MYH16Q9H6N6 1097 aa16.03■□□□□ 0.16
CLK4-208ENST00000520957 CHPF2Q9P2E5 772 aa16.03■□□□□ 0.16
CLK4-208ENST00000520957 FKBP8Q14318 412 aa16.02■□□□□ 0.16
CLK4-208ENST00000520957 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
CLK4-208ENST00000520957 SLC16A10Q8TF71 515 aa16.02■□□□□ 0.16
CLK4-208ENST00000520957 BCL2L12Q9HB09 334 aa16.02■□□□□ 0.16
CLK4-208ENST00000520957 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
CLK4-208ENST00000520957 COL15A1P39059 1388 aa16.02■□□□□ 0.16
CLK4-208ENST00000520957 USP42Q9H9J4 1324 aaKnown RBP16.02■□□□□ 0.15
CLK4-208ENST00000520957 CICQ96RK0 1608 aaPredicted RBP16.02■□□□□ 0.15
CLK4-208ENST00000520957 E9PSI1 815 aa16.02■□□□□ 0.15
CLK4-208ENST00000520957 TTLL7Q6ZT98 887 aa16.02■□□□□ 0.15
CLK4-208ENST00000520957 SGIP1Q9BQI5 828 aa16.02■□□□□ 0.15
CLK4-208ENST00000520957 TUBGCP6Q96RT7 1819 aa16.01■□□□□ 0.15
CLK4-208ENST00000520957 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
CLK4-208ENST00000520957 ZPR1O75312 459 aa16.01■□□□□ 0.15
CLK4-208ENST00000520957 VAMP4O75379 141 aa16.01■□□□□ 0.15
CLK4-208ENST00000520957 HOXB7P09629 217 aa16.01■□□□□ 0.15
CLK4-208ENST00000520957 DZIP3Q86Y13 1208 aaKnown RBP16.01■□□□□ 0.15
CLK4-208ENST00000520957 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
CLK4-208ENST00000520957 NARFQ9UHQ1 456 aa16.01■□□□□ 0.15
CLK4-208ENST00000520957 CAMTA2O94983 1202 aa16■□□□□ 0.15
CLK4-208ENST00000520957 CASZ1Q86V15 1759 aa16■□□□□ 0.15
CLK4-208ENST00000520957 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
CLK4-208ENST00000520957 DDX21Q9NR30 783 aaKnown RBP eCLIP15.99■□□□□ 0.15
CLK4-208ENST00000520957 HLFQ16534 295 aa15.99■□□□□ 0.15
CLK4-208ENST00000520957 COPS6Q7L5N1 327 aa15.99■□□□□ 0.15
CLK4-208ENST00000520957 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
CLK4-208ENST00000520957 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
CLK4-208ENST00000520957 A0A087WZG4 1122 aa15.98■□□□□ 0.15
CLK4-208ENST00000520957 MMP10P09238 476 aa15.98■□□□□ 0.15
CLK4-208ENST00000520957 NLGN1Q8N2Q7 840 aa15.98■□□□□ 0.15
CLK4-208ENST00000520957 XAGE3Q8WTP9 111 aa15.98■□□□□ 0.15
CLK4-208ENST00000520957 DBF4Q9UBU7 674 aaPredicted RBP15.98■□□□□ 0.15
CLK4-208ENST00000520957 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
CLK4-208ENST00000520957 ZBTB3Q9H5J0 574 aa15.97■□□□□ 0.15
CLK4-208ENST00000520957 ERBB4Q15303 1308 aa15.97■□□□□ 0.15
CLK4-208ENST00000520957 CCDC30Q5VVM6 783 aa15.96■□□□□ 0.15
CLK4-208ENST00000520957 TBC1D9BQ66K14 1250 aa15.96■□□□□ 0.15
CLK4-208ENST00000520957 SLC4A2P04920 1241 aa15.95■□□□□ 0.14
CLK4-208ENST00000520957 TM4SF1P30408 202 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms