RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 VSIG10Q8N0Z9 540 aa15.49■□□□□ 0.07
HPS4-218ENST00000519774 LAMB4A4D0S4 1761 aa15.48■□□□□ 0.07
HPS4-218ENST00000519774 ZBTB7AO95365 584 aa15.47■□□□□ 0.07
HPS4-218ENST00000519774 CYP19A1P11511 503 aaPredicted RBP15.47■□□□□ 0.07
HPS4-218ENST00000519774 RC3H1Q5TC82 1133 aaKnown RBP15.47■□□□□ 0.07
HPS4-218ENST00000519774 AMIGO3Q86WK7 504 aa15.47■□□□□ 0.07
HPS4-218ENST00000519774 CCDC87Q9NVE4 849 aa15.47■□□□□ 0.07
HPS4-218ENST00000519774 RTCBQ9Y3I0 505 aaKnown RBP15.47■□□□□ 0.07
HPS4-218ENST00000519774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.46■□□□□ 0.07
HPS4-218ENST00000519774 PRAMEF22A3QJZ6 481 aa15.46■□□□□ 0.07
HPS4-218ENST00000519774 STARD3NLO95772 234 aa15.46■□□□□ 0.07
HPS4-218ENST00000519774 SNRPA1P09661 255 aaKnown RBP15.46■□□□□ 0.07
HPS4-218ENST00000519774 EIF4A1P60842 406 aaKnown RBP15.46■□□□□ 0.07
HPS4-218ENST00000519774 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
HPS4-218ENST00000519774 COL23A1Q86Y22 540 aaPredicted RBP15.46■□□□□ 0.07
HPS4-218ENST00000519774 FLAD1Q8NFF5 587 aa15.46■□□□□ 0.07
HPS4-218ENST00000519774 SSFA2P28290 1259 aa15.45■□□□□ 0.06
HPS4-218ENST00000519774 CCDC27Q2M243 656 aa15.45■□□□□ 0.06
HPS4-218ENST00000519774 INTS5Q6P9B9 1019 aaKnown RBP15.45■□□□□ 0.06
HPS4-218ENST00000519774 WWC1Q8IX03 1113 aa15.45■□□□□ 0.06
HPS4-218ENST00000519774 TEX13AQ9BXU3 409 aaPredicted RBP15.45■□□□□ 0.06
HPS4-218ENST00000519774 BABAM1Q9NWV8 329 aa15.45■□□□□ 0.06
HPS4-218ENST00000519774 ZBTB1Q9Y2K1 713 aa15.45■□□□□ 0.06
HPS4-218ENST00000519774 C4AP0C0L4 1744 aa15.45■□□□□ 0.06
HPS4-218ENST00000519774 CHL1O00533 1208 aa15.44■□□□□ 0.06
HPS4-218ENST00000519774 RPS6KA4O75676 772 aa15.44■□□□□ 0.06
HPS4-218ENST00000519774 CANXP27824 592 aaKnown RBP15.44■□□□□ 0.06
HPS4-218ENST00000519774 GNAI1P63096 354 aa15.44■□□□□ 0.06
HPS4-218ENST00000519774 CFAP44Q96MT7 982 aa15.44■□□□□ 0.06
HPS4-218ENST00000519774 IFT57Q9NWB7 429 aa15.44■□□□□ 0.06
HPS4-218ENST00000519774 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
HPS4-218ENST00000519774 USP16Q9Y5T5 823 aa15.44■□□□□ 0.06
HPS4-218ENST00000519774 LRP5O75197 1615 aa15.43■□□□□ 0.06
HPS4-218ENST00000519774 MBIPQ9NS73 344 aa15.43■□□□□ 0.06
HPS4-218ENST00000519774 ZNF330Q9Y3S2 320 aaPredicted RBP15.43■□□□□ 0.06
HPS4-218ENST00000519774 GIGYF1O75420 1035 aaPredicted RBP15.42■□□□□ 0.06
HPS4-218ENST00000519774 PIP4K2AP48426 406 aaPredicted RBP15.42■□□□□ 0.06
HPS4-218ENST00000519774 TRAPPC3LQ5T215 181 aa15.42■□□□□ 0.06
HPS4-218ENST00000519774 MSL1Q68DK7 614 aa15.42■□□□□ 0.06
HPS4-218ENST00000519774 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
HPS4-218ENST00000519774 SPON1Q9HCB6 807 aa15.42■□□□□ 0.06
HPS4-218ENST00000519774 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
HPS4-218ENST00000519774 COL15A1P39059 1388 aa15.41■□□□□ 0.06
HPS4-218ENST00000519774 A1BGP04217 495 aa15.41■□□□□ 0.06
HPS4-218ENST00000519774 ZNF853P0CG23 659 aa15.41■□□□□ 0.06
HPS4-218ENST00000519774 KRT24Q2M2I5 525 aa15.41■□□□□ 0.06
HPS4-218ENST00000519774 SLC16A10Q8TF71 515 aa15.41■□□□□ 0.06
HPS4-218ENST00000519774 ARHGEF1Q92888 912 aaKnown RBP15.41■□□□□ 0.06
HPS4-218ENST00000519774 RFC4P35249 363 aa15.4■□□□□ 0.06
HPS4-218ENST00000519774 C1QBPQ07021 282 aaKnown RBP15.4■□□□□ 0.06
HPS4-218ENST00000519774 NGEFQ8N5V2 710 aa15.4■□□□□ 0.06
HPS4-218ENST00000519774 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
HPS4-218ENST00000519774 SRP68Q9UHB9 627 aaKnown RBP15.39■□□□□ 0.05
HPS4-218ENST00000519774 IL16Q14005 1332 aa15.39■□□□□ 0.05
HPS4-218ENST00000519774 EIF2S2P20042 333 aaKnown RBP15.38■□□□□ 0.05
HPS4-218ENST00000519774 NPM2Q86SE8 214 aaKnown RBP15.38■□□□□ 0.05
HPS4-218ENST00000519774 WDR63Q8IWG1 891 aa15.38■□□□□ 0.05
HPS4-218ENST00000519774 NECTIN2Q92692 538 aa15.38■□□□□ 0.05
HPS4-218ENST00000519774 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
HPS4-218ENST00000519774 NBPF26B4DH59 902 aa15.37■□□□□ 0.05
HPS4-218ENST00000519774 IL6STP40189 918 aaPredicted RBP15.37■□□□□ 0.05
HPS4-218ENST00000519774 NBPF10Q6P3W6 841 aaKnown RBP15.37■□□□□ 0.05
HPS4-218ENST00000519774 NBPF15Q8N660 670 aa15.37■□□□□ 0.05
HPS4-218ENST00000519774 ARXQ96QS3 562 aa15.37■□□□□ 0.05
HPS4-218ENST00000519774 PPP1R1BQ9UD71 204 aaPredicted RBP15.37■□□□□ 0.05
HPS4-218ENST00000519774 USP42Q9H9J4 1324 aaKnown RBP15.37■□□□□ 0.05
HPS4-218ENST00000519774 SCN7AQ01118 1682 aa15.36■□□□□ 0.05
HPS4-218ENST00000519774 A0A087WZG4 1122 aa15.36■□□□□ 0.05
HPS4-218ENST00000519774 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
HPS4-218ENST00000519774 ZPR1O75312 459 aa15.36■□□□□ 0.05
HPS4-218ENST00000519774 MYL6BP14649 208 aa15.36■□□□□ 0.05
HPS4-218ENST00000519774 POLD1P28340 1107 aa15.36■□□□□ 0.05
HPS4-218ENST00000519774 PTGER2P43116 358 aa15.36■□□□□ 0.05
HPS4-218ENST00000519774 EIF5P55010 431 aaKnown RBP15.36■□□□□ 0.05
HPS4-218ENST00000519774 DUSP27Q5VZP5 1158 aa15.36■□□□□ 0.05
HPS4-218ENST00000519774 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
HPS4-218ENST00000519774 GYS1P13807 737 aa15.35■□□□□ 0.05
HPS4-218ENST00000519774 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
HPS4-218ENST00000519774 USPL1Q5W0Q7 1092 aa15.35■□□□□ 0.05
HPS4-218ENST00000519774 TBC1D2BQ9UPU7 963 aa15.35■□□□□ 0.05
HPS4-218ENST00000519774 ZNF521Q96K83 1311 aa15.35■□□□□ 0.05
HPS4-218ENST00000519774 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
HPS4-218ENST00000519774 BCORQ6W2J9 1755 aa15.34■□□□□ 0.05
HPS4-218ENST00000519774 HOXB7P09629 217 aa15.34■□□□□ 0.05
HPS4-218ENST00000519774 C8orf58Q8NAV2 365 aa15.34■□□□□ 0.05
HPS4-218ENST00000519774 SGIP1Q9BQI5 828 aa15.34■□□□□ 0.05
HPS4-218ENST00000519774 MYH16Q9H6N6 1097 aa15.34■□□□□ 0.05
HPS4-218ENST00000519774 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
HPS4-218ENST00000519774 NARFQ9UHQ1 456 aa15.34■□□□□ 0.05
HPS4-218ENST00000519774 ANXA1P04083 346 aa15.33■□□□□ 0.04
HPS4-218ENST00000519774 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
HPS4-218ENST00000519774 ERBB4Q15303 1308 aa15.33■□□□□ 0.04
HPS4-218ENST00000519774 MMP10P09238 476 aa15.32■□□□□ 0.04
HPS4-218ENST00000519774 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
HPS4-218ENST00000519774 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
HPS4-218ENST00000519774 FKBP8Q14318 412 aa15.32■□□□□ 0.04
HPS4-218ENST00000519774 PROSER3Q2NL68 480 aa15.32■□□□□ 0.04
HPS4-218ENST00000519774 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
HPS4-218ENST00000519774 NLGN1Q8N2Q7 840 aa15.32■□□□□ 0.04
HPS4-218ENST00000519774 TSPYL6Q8N831 410 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms