RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 ARXQ96QS3 562 aa7.51□□□□□ -1.21
SKP1-205ENST00000519054 TSPAN10Q9H1Z9 355 aaPredicted RBP7.51□□□□□ -1.21
SKP1-205ENST00000519054 NOVA2Q9UNW9 492 aaKnown RBP7.51□□□□□ -1.21
SKP1-205ENST00000519054 MSX1P28360 303 aa7.5□□□□□ -1.21
SKP1-205ENST00000519054 DBN1Q16643 649 aa7.5□□□□□ -1.21
SKP1-205ENST00000519054 SV2AQ7L0J3 742 aa7.5□□□□□ -1.21
SKP1-205ENST00000519054 TRIM22Q8IYM9 498 aa7.5□□□□□ -1.21
SKP1-205ENST00000519054 GPR161Q8N6U8 529 aaKnown RBP7.5□□□□□ -1.21
SKP1-205ENST00000519054 NANOS1Q8WY41 292 aaKnown RBP7.5□□□□□ -1.21
SKP1-205ENST00000519054 ZNF837Q96EG3 531 aaPredicted RBP7.5□□□□□ -1.21
SKP1-205ENST00000519054 HINFPQ9BQA5 517 aa7.5□□□□□ -1.21
SKP1-205ENST00000519054 RUBCNLQ9H714 662 aa7.5□□□□□ -1.21
SKP1-205ENST00000519054 FAM200AQ8TCP9 573 aa7.49□□□□□ -1.21
SKP1-205ENST00000519054 ZDHHC1Q8WTX9 485 aa7.49□□□□□ -1.21
SKP1-205ENST00000519054 PBXIP1Q96AQ6 731 aa7.49□□□□□ -1.21
SKP1-205ENST00000519054 ZNF232Q9UNY5 417 aa7.49□□□□□ -1.21
SKP1-205ENST00000519054 H7C1W4 665 aa7.48□□□□□ -1.21
SKP1-205ENST00000519054 CSB-PGBD3P0DP91 1061 aa7.48□□□□□ -1.21
SKP1-205ENST00000519054 NBPF1Q3BBV0 1214 aa7.48□□□□□ -1.21
SKP1-205ENST00000519054 PGBD3Q8N328 593 aa7.48□□□□□ -1.21
SKP1-205ENST00000519054 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
SKP1-205ENST00000519054 L3MBTL2Q969R5 705 aa7.48□□□□□ -1.21
SKP1-205ENST00000519054 NUCKS1Q9H1E3 243 aaKnown RBP7.48□□□□□ -1.21
SKP1-205ENST00000519054 ZMIZ1Q9ULJ6 1067 aa7.48□□□□□ -1.21
SKP1-205ENST00000519054 PPP1R12BO60237 982 aaPredicted RBP7.47□□□□□ -1.21
SKP1-205ENST00000519054 ATP4AP20648 1035 aa7.47□□□□□ -1.21
SKP1-205ENST00000519054 NOS2P35228 1153 aa7.47□□□□□ -1.21
SKP1-205ENST00000519054 TXLNAP40222 546 aa7.47□□□□□ -1.21
SKP1-205ENST00000519054 TEAD4Q15561 434 aa7.47□□□□□ -1.21
SKP1-205ENST00000519054 SH3PXD2AQ5TCZ1 1133 aa7.47□□□□□ -1.21
SKP1-205ENST00000519054 GAS2L2Q8NHY3 880 aa7.47□□□□□ -1.21
SKP1-205ENST00000519054 STK32AQ8WU08 396 aa7.47□□□□□ -1.21
SKP1-205ENST00000519054 GTPBP3Q969Y2 492 aaKnown RBP7.47□□□□□ -1.21
SKP1-205ENST00000519054 ARID3AQ99856 593 aa7.47□□□□□ -1.21
SKP1-205ENST00000519054 SERTM1A2A2V5 107 aa7.46□□□□□ -1.22
SKP1-205ENST00000519054 GPR25O00155 361 aa7.46□□□□□ -1.22
SKP1-205ENST00000519054 C21orf2O43822 256 aa7.46□□□□□ -1.22
SKP1-205ENST00000519054 ATG7O95352 703 aa7.46□□□□□ -1.22
SKP1-205ENST00000519054 THBS1P07996 1170 aa7.46□□□□□ -1.22
SKP1-205ENST00000519054 TATP17735 454 aaPredicted RBP7.46□□□□□ -1.22
SKP1-205ENST00000519054 PSMA6P60900 246 aaKnown RBP7.46□□□□□ -1.22
SKP1-205ENST00000519054 CHMP7Q8WUX9 453 aaPredicted RBP7.46□□□□□ -1.22
SKP1-205ENST00000519054 GMCL1Q96IK5 515 aa7.46□□□□□ -1.22
SKP1-205ENST00000519054 CHMP3Q9Y3E7 222 aa7.46□□□□□ -1.22
SKP1-205ENST00000519054 ATAD2Q6PL18 1390 aa7.46□□□□□ -1.22
SKP1-205ENST00000519054 EML1O00423 815 aa7.45□□□□□ -1.22
SKP1-205ENST00000519054 ELOAQ14241 798 aaKnown RBP7.45□□□□□ -1.22
SKP1-205ENST00000519054 ARSJQ5FYB0 599 aaPredicted RBP7.45□□□□□ -1.22
SKP1-205ENST00000519054 C1orf216Q8TAB5 229 aa7.45□□□□□ -1.22
SKP1-205ENST00000519054 COL25A1Q9BXS0 654 aaPredicted RBP7.45□□□□□ -1.22
SKP1-205ENST00000519054 ZDHHC3Q9NYG2 299 aa7.45□□□□□ -1.22
SKP1-205ENST00000519054 WIPF1O43516 503 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 KRT76Q01546 638 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 EFHC2Q5JST6 749 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 RNFT1Q5M7Z0 435 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 FOXR1Q6PIV2 292 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 BICDL1Q6ZP65 573 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 CRISPLD1Q9H336 500 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 HCN4Q9Y3Q4 1203 aa7.44□□□□□ -1.22
SKP1-205ENST00000519054 A0A1W2PNR3 127 aa7.43□□□□□ -1.22
SKP1-205ENST00000519054 IGFBP4P22692 258 aa7.42□□□□□ -1.22
SKP1-205ENST00000519054 GAS6Q14393 721 aa7.42□□□□□ -1.22
SKP1-205ENST00000519054 LBRQ14739 615 aaKnown RBP7.42□□□□□ -1.22
SKP1-205ENST00000519054 TMEM164Q5U3C3 297 aa7.42□□□□□ -1.22
SKP1-205ENST00000519054 TRERF1Q96PN7 1200 aa7.42□□□□□ -1.22
SKP1-205ENST00000519054 ZIC5Q96T25 663 aa7.42□□□□□ -1.22
SKP1-205ENST00000519054 PHACTR1Q9C0D0 580 aa7.42□□□□□ -1.22
SKP1-205ENST00000519054 ACIN1Q9UKV3 1341 aaKnown RBP7.42□□□□□ -1.22
SKP1-205ENST00000519054 PRMT3O60678 531 aa7.41□□□□□ -1.22
SKP1-205ENST00000519054 HIRAP54198 1017 aaPredicted RBP7.41□□□□□ -1.22
SKP1-205ENST00000519054 FAM69CQ0P6D2 419 aa7.41□□□□□ -1.22
SKP1-205ENST00000519054 UBAP2LQ14157 1087 aaKnown RBP7.41□□□□□ -1.22
SKP1-205ENST00000519054 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
SKP1-205ENST00000519054 NGLY1Q96IV0 654 aa7.41□□□□□ -1.22
SKP1-205ENST00000519054 PRIMPOLQ96LW4 560 aa7.41□□□□□ -1.22
SKP1-205ENST00000519054 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
SKP1-205ENST00000519054 PPP1R15AO75807 674 aaPredicted RBP7.4□□□□□ -1.22
SKP1-205ENST00000519054 WEE1P30291 646 aa7.4□□□□□ -1.22
SKP1-205ENST00000519054 SWI5Q1ZZU3 235 aa7.4□□□□□ -1.22
SKP1-205ENST00000519054 POTEAQ6S8J7 498 aa7.4□□□□□ -1.22
SKP1-205ENST00000519054 STAG2Q8N3U4 1231 aa7.4□□□□□ -1.22
SKP1-205ENST00000519054 KLRG1Q96E93 195 aa7.4□□□□□ -1.22
SKP1-205ENST00000519054 GJA3Q9Y6H8 435 aa7.4□□□□□ -1.22
SKP1-205ENST00000519054 LRRC69Q6ZNQ3 347 aa7.39□□□□□ -1.23
SKP1-205ENST00000519054 NLRP8Q86W28 1048 aa7.39□□□□□ -1.23
SKP1-205ENST00000519054 ALDH16A1Q8IZ83 802 aa7.39□□□□□ -1.23
SKP1-205ENST00000519054 ABHD17AQ96GS6 310 aa7.39□□□□□ -1.23
SKP1-205ENST00000519054 ZCCHC2Q9C0B9 1178 aaKnown RBP7.39□□□□□ -1.23
SKP1-205ENST00000519054 ATXN7O15265 892 aaPredicted RBP7.38□□□□□ -1.23
SKP1-205ENST00000519054 BNIP3LO60238 219 aa7.38□□□□□ -1.23
SKP1-205ENST00000519054 INSM1Q01101 510 aaPredicted RBP7.38□□□□□ -1.23
SKP1-205ENST00000519054 C1orf53Q5VUE5 145 aa7.38□□□□□ -1.23
SKP1-205ENST00000519054 FIGNL1Q6PIW4 674 aa7.38□□□□□ -1.23
SKP1-205ENST00000519054 C7orf43Q8WVR3 580 aa7.38□□□□□ -1.23
SKP1-205ENST00000519054 NEUROD4Q9HD90 331 aa7.38□□□□□ -1.23
SKP1-205ENST00000519054 PHF24Q9UPV7 400 aa7.38□□□□□ -1.23
SKP1-205ENST00000519054 PCDHGC4Q9Y5F7 938 aa7.38□□□□□ -1.23
SKP1-205ENST00000519054 DCDC2BA2VCK2 349 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms