RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 CCDC155Q8N6L0 562 aa10.1□□□□□ -0.79
SQLE-203ENST00000518931 PRIMPOLQ96LW4 560 aa10.1□□□□□ -0.79
SQLE-203ENST00000518931 GAS2L1Q99501 681 aaPredicted RBP10.1□□□□□ -0.79
SQLE-203ENST00000518931 PRMT3O60678 531 aa10.09□□□□□ -0.79
SQLE-203ENST00000518931 TEAD4Q15561 434 aa10.09□□□□□ -0.79
SQLE-203ENST00000518931 ZDHHC1Q8WTX9 485 aa10.09□□□□□ -0.79
SQLE-203ENST00000518931 L3MBTL2Q969R5 705 aa10.09□□□□□ -0.79
SQLE-203ENST00000518931 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
SQLE-203ENST00000518931 ZNF232Q9UNY5 417 aa10.09□□□□□ -0.79
SQLE-203ENST00000518931 DYRK1BQ9Y463 629 aa10.09□□□□□ -0.79
SQLE-203ENST00000518931 SERTM1A2A2V5 107 aa10.08□□□□□ -0.8
SQLE-203ENST00000518931 TMEM88BA6NKF7 163 aa10.08□□□□□ -0.8
SQLE-203ENST00000518931 WEE1P30291 646 aa10.08□□□□□ -0.8
SQLE-203ENST00000518931 PSMA6P60900 246 aaKnown RBP10.08□□□□□ -0.8
SQLE-203ENST00000518931 CHMP3Q9Y3E7 222 aa10.08□□□□□ -0.8
SQLE-203ENST00000518931 PPFIA3O75145 1194 aa10.07□□□□□ -0.8
SQLE-203ENST00000518931 IGFBP4P22692 258 aa10.07□□□□□ -0.8
SQLE-203ENST00000518931 VEGFBP49765 207 aa10.07□□□□□ -0.8
SQLE-203ENST00000518931 SH3PXD2AQ5TCZ1 1133 aa10.07□□□□□ -0.8
SQLE-203ENST00000518931 A0A1B0GTH6 734 aa10.06□□□□□ -0.8
SQLE-203ENST00000518931 RIPOR1Q6ZS17 1223 aa10.06□□□□□ -0.8
SQLE-203ENST00000518931 RETREG2Q8NC44 543 aa10.06□□□□□ -0.8
SQLE-203ENST00000518931 CLP1Q92989 425 aaKnown RBP10.06□□□□□ -0.8
SQLE-203ENST00000518931 HCN4Q9Y3Q4 1203 aa10.06□□□□□ -0.8
SQLE-203ENST00000518931 F11P03951 625 aa10.05□□□□□ -0.8
SQLE-203ENST00000518931 MSX1P28360 303 aa10.05□□□□□ -0.8
SQLE-203ENST00000518931 C2orf49Q9BVC5 232 aaPredicted RBP10.05□□□□□ -0.8
SQLE-203ENST00000518931 GPAMQ9HCL2 828 aa10.05□□□□□ -0.8
SQLE-203ENST00000518931 SLAIN2Q9P270 581 aa10.05□□□□□ -0.8
SQLE-203ENST00000518931 EML1O00423 815 aa10.04□□□□□ -0.8
SQLE-203ENST00000518931 ITGA6P23229 1130 aa10.04□□□□□ -0.8
SQLE-203ENST00000518931 TXLNAP40222 546 aa10.04□□□□□ -0.8
SQLE-203ENST00000518931 NBPF1Q3BBV0 1214 aa10.04□□□□□ -0.8
SQLE-203ENST00000518931 STAG2Q8N3U4 1231 aa10.04□□□□□ -0.8
SQLE-203ENST00000518931 TERTO14746 1132 aaKnown RBP10.03□□□□□ -0.8
SQLE-203ENST00000518931 OCLNQ16625 522 aa10.03□□□□□ -0.8
SQLE-203ENST00000518931 USTQ9Y2C2 406 aa10.03□□□□□ -0.8
SQLE-203ENST00000518931 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
SQLE-203ENST00000518931 ATP2B4P23634 1241 aa10.02□□□□□ -0.81
SQLE-203ENST00000518931 ZNF775Q96BV0 537 aaPredicted RBP10.02□□□□□ -0.81
SQLE-203ENST00000518931 RUBCNLQ9H714 662 aa10.02□□□□□ -0.81
SQLE-203ENST00000518931 CUEDC1Q9NWM3 386 aaPredicted RBP10.02□□□□□ -0.81
SQLE-203ENST00000518931 FOXO3O43524 673 aa10.01□□□□□ -0.81
SQLE-203ENST00000518931 FKBP5Q13451 457 aaPredicted RBP10.01□□□□□ -0.81
SQLE-203ENST00000518931 ARSJQ5FYB0 599 aaPredicted RBP10.01□□□□□ -0.81
SQLE-203ENST00000518931 POTEAQ6S8J7 498 aa10.01□□□□□ -0.81
SQLE-203ENST00000518931 NPAS3Q8IXF0 933 aa10.01□□□□□ -0.81
SQLE-203ENST00000518931 PGBD3Q8N328 593 aa10.01□□□□□ -0.81
SQLE-203ENST00000518931 VTI1AQ96AJ9 217 aa10.01□□□□□ -0.81
SQLE-203ENST00000518931 ZDHHC3Q9NYG2 299 aa10.01□□□□□ -0.81
SQLE-203ENST00000518931 CXXC1Q9P0U4 656 aaPredicted RBP10.01□□□□□ -0.81
SQLE-203ENST00000518931 H3BM21 787 aa10□□□□□ -0.81
SQLE-203ENST00000518931 HIRAP54198 1017 aaPredicted RBP10□□□□□ -0.81
SQLE-203ENST00000518931 DBN1Q16643 649 aa10□□□□□ -0.81
SQLE-203ENST00000518931 BICDL1Q6ZP65 573 aa10□□□□□ -0.81
SQLE-203ENST00000518931 ALDH16A1Q8IZ83 802 aa10□□□□□ -0.81
SQLE-203ENST00000518931 VWA5B2Q8N398 1253 aa10□□□□□ -0.81
SQLE-203ENST00000518931 C1orf216Q8TAB5 229 aa10□□□□□ -0.81
SQLE-203ENST00000518931 NGLY1Q96IV0 654 aa10□□□□□ -0.81
SQLE-203ENST00000518931 PHACTR1Q9C0D0 580 aa10□□□□□ -0.81
SQLE-203ENST00000518931 CDC14CA4D256 554 aa9.99□□□□□ -0.81
SQLE-203ENST00000518931 H7C1W4 665 aa9.99□□□□□ -0.81
SQLE-203ENST00000518931 ATP4AP20648 1035 aa9.99□□□□□ -0.81
SQLE-203ENST00000518931 PDE4CQ08493 712 aa9.99□□□□□ -0.81
SQLE-203ENST00000518931 SLC16A10Q8TF71 515 aa9.99□□□□□ -0.81
SQLE-203ENST00000518931 C1orf53Q5VUE5 145 aa9.98□□□□□ -0.81
SQLE-203ENST00000518931 TRIM22Q8IYM9 498 aa9.98□□□□□ -0.81
SQLE-203ENST00000518931 C7orf43Q8WVR3 580 aa9.98□□□□□ -0.81
SQLE-203ENST00000518931 ZIC5Q96T25 663 aa9.98□□□□□ -0.81
SQLE-203ENST00000518931 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.98□□□□□ -0.81
SQLE-203ENST00000518931 PODXL2Q9NZ53 605 aa9.98□□□□□ -0.81
SQLE-203ENST00000518931 A0A1W2PNR3 127 aa9.97□□□□□ -0.81
SQLE-203ENST00000518931 SSFA2P28290 1259 aa9.97□□□□□ -0.81
SQLE-203ENST00000518931 NFX1Q12986 1120 aaKnown RBP9.97□□□□□ -0.81
SQLE-203ENST00000518931 SV2AQ7L0J3 742 aa9.97□□□□□ -0.81
SQLE-203ENST00000518931 MKNK1Q9BUB5 465 aa9.97□□□□□ -0.81
SQLE-203ENST00000518931 NUCKS1Q9H1E3 243 aaKnown RBP9.97□□□□□ -0.81
SQLE-203ENST00000518931 CRISPLD1Q9H336 500 aa9.97□□□□□ -0.81
SQLE-203ENST00000518931 EFHC2Q5JST6 749 aa9.96□□□□□ -0.82
SQLE-203ENST00000518931 CAPN12Q6ZSI9 719 aa9.96□□□□□ -0.82
SQLE-203ENST00000518931 RHPN1Q8TCX5 695 aa9.96□□□□□ -0.82
SQLE-203ENST00000518931 NANOS1Q8WY41 292 aaKnown RBP9.96□□□□□ -0.82
SQLE-203ENST00000518931 ZNF837Q96EG3 531 aaPredicted RBP9.96□□□□□ -0.82
SQLE-203ENST00000518931 GMCL1Q96IK5 515 aa9.96□□□□□ -0.82
SQLE-203ENST00000518931 SCNN1AP37088 669 aa9.95□□□□□ -0.82
SQLE-203ENST00000518931 KLRG1Q96E93 195 aa9.95□□□□□ -0.82
SQLE-203ENST00000518931 NEUROD4Q9HD90 331 aa9.95□□□□□ -0.82
SQLE-203ENST00000518931 GJA3Q9Y6H8 435 aa9.95□□□□□ -0.82
SQLE-203ENST00000518931 THBS1P07996 1170 aa9.94□□□□□ -0.82
SQLE-203ENST00000518931 NAA30Q147X3 362 aaPredicted RBP9.94□□□□□ -0.82
SQLE-203ENST00000518931 PHLDB3Q6NSJ2 640 aa9.94□□□□□ -0.82
SQLE-203ENST00000518931 GTPBP3Q969Y2 492 aaKnown RBP9.94□□□□□ -0.82
SQLE-203ENST00000518931 ERBB4Q15303 1308 aa9.93□□□□□ -0.82
SQLE-203ENST00000518931 WFS1O76024 890 aa9.93□□□□□ -0.82
SQLE-203ENST00000518931 LBRQ14739 615 aaKnown RBP9.93□□□□□ -0.82
SQLE-203ENST00000518931 NLRP8Q86W28 1048 aa9.93□□□□□ -0.82
SQLE-203ENST00000518931 GPR161Q8N6U8 529 aaKnown RBP9.93□□□□□ -0.82
SQLE-203ENST00000518931 IRF7Q92985 503 aa9.93□□□□□ -0.82
SQLE-203ENST00000518931 QTRT2Q9H974 415 aaKnown RBP9.93□□□□□ -0.82
SQLE-203ENST00000518931 PTCD1O75127 700 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms