RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 COL5A3P25940 1745 aaPredicted RBP22.99■■□□□ 1.27
TRAM1-202ENST00000518678 GIGYF1O75420 1035 aaPredicted RBP22.98■■□□□ 1.27
TRAM1-202ENST00000518678 HMGB2P26583 209 aaKnown RBP22.98■■□□□ 1.27
TRAM1-202ENST00000518678 KRT24Q2M2I5 525 aa22.98■■□□□ 1.27
TRAM1-202ENST00000518678 DNAJC10Q8IXB1 793 aa22.98■■□□□ 1.27
TRAM1-202ENST00000518678 TEX13AQ9BXU3 409 aaPredicted RBP22.98■■□□□ 1.27
TRAM1-202ENST00000518678 PPP1R1BQ9UD71 204 aaPredicted RBP22.98■■□□□ 1.27
TRAM1-202ENST00000518678 QSER1Q2KHR3 1735 aa22.98■■□□□ 1.27
TRAM1-202ENST00000518678 LAMB4A4D0S4 1761 aa22.97■■□□□ 1.27
TRAM1-202ENST00000518678 PRAMEF22A3QJZ6 481 aa22.96■■□□□ 1.27
TRAM1-202ENST00000518678 LINC00116Q8NCU8 138 aa22.96■■□□□ 1.27
TRAM1-202ENST00000518678 AKT1S1Q96B36 256 aa22.96■■□□□ 1.27
TRAM1-202ENST00000518678 C8orf58Q8NAV2 365 aa22.95■■□□□ 1.26
TRAM1-202ENST00000518678 C4BP0C0L5 1744 aa22.94■■□□□ 1.26
TRAM1-202ENST00000518678 HOXB7P09629 217 aa22.94■■□□□ 1.26
TRAM1-202ENST00000518678 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
TRAM1-202ENST00000518678 EXOSC9Q06265 439 aaKnown RBP22.94■■□□□ 1.26
TRAM1-202ENST00000518678 DUSP27Q5VZP5 1158 aa22.94■■□□□ 1.26
TRAM1-202ENST00000518678 USP16Q9Y5T5 823 aa22.94■■□□□ 1.26
TRAM1-202ENST00000518678 SOS1Q07889 1333 aaPredicted RBP22.93■■□□□ 1.26
TRAM1-202ENST00000518678 STARD3NLO95772 234 aa22.93■■□□□ 1.26
TRAM1-202ENST00000518678 SGIP1Q9BQI5 828 aa22.93■■□□□ 1.26
TRAM1-202ENST00000518678 PNPLA7Q6ZV29 1317 aa22.92■■□□□ 1.26
TRAM1-202ENST00000518678 CNTNAP4Q9C0A0 1308 aa22.92■■□□□ 1.26
TRAM1-202ENST00000518678 TSPYL6Q8N831 410 aa22.92■■□□□ 1.26
TRAM1-202ENST00000518678 ELL2O00472 640 aaPredicted RBP22.91■■□□□ 1.26
TRAM1-202ENST00000518678 RC3H1Q5TC82 1133 aaKnown RBP22.91■■□□□ 1.26
TRAM1-202ENST00000518678 CRKLP46109 303 aaKnown RBP22.9■■□□□ 1.26
TRAM1-202ENST00000518678 TWISTNBQ3B726 338 aaPredicted RBP22.9■■□□□ 1.26
TRAM1-202ENST00000518678 MYH14Q7Z406 1995 aaKnown RBP22.89■■□□□ 1.26
TRAM1-202ENST00000518678 COL24A1Q17RW2 1714 aa22.89■■□□□ 1.26
TRAM1-202ENST00000518678 UTRNP46939 3433 aa22.89■■□□□ 1.25
TRAM1-202ENST00000518678 MTFR1LQ9H019 292 aa22.89■■□□□ 1.25
TRAM1-202ENST00000518678 CCDC87Q9NVE4 849 aa22.89■■□□□ 1.25
TRAM1-202ENST00000518678 EIF2S2P20042 333 aaKnown RBP22.88■■□□□ 1.25
TRAM1-202ENST00000518678 INTS5Q6P9B9 1019 aaKnown RBP22.88■■□□□ 1.25
TRAM1-202ENST00000518678 VAMP4O75379 141 aa22.87■■□□□ 1.25
TRAM1-202ENST00000518678 A1BGP04217 495 aa22.87■■□□□ 1.25
TRAM1-202ENST00000518678 HDGFL1Q5TGJ6 251 aa22.87■■□□□ 1.25
TRAM1-202ENST00000518678 AK7Q96M32 723 aa22.87■■□□□ 1.25
TRAM1-202ENST00000518678 ERBB4Q15303 1308 aa22.86■■□□□ 1.25
TRAM1-202ENST00000518678 SMIM5Q71RC9 77 aa22.86■■□□□ 1.25
TRAM1-202ENST00000518678 CHMP4AQ9BY43 222 aa22.86■■□□□ 1.25
TRAM1-202ENST00000518678 FHDC1Q9C0D6 1143 aaPredicted RBP22.86■■□□□ 1.25
TRAM1-202ENST00000518678 ZBTB1Q9Y2K1 713 aa22.86■■□□□ 1.25
TRAM1-202ENST00000518678 UBR3Q6ZT12 1888 aa22.85■■□□□ 1.25
TRAM1-202ENST00000518678 TFCP2L1Q9NZI6 479 aa22.85■■□□□ 1.25
TRAM1-202ENST00000518678 GNPATO15228 680 aa22.84■■□□□ 1.25
TRAM1-202ENST00000518678 RPS6KA4O75676 772 aa22.84■■□□□ 1.25
TRAM1-202ENST00000518678 AMIGO3Q86WK7 504 aa22.84■■□□□ 1.25
TRAM1-202ENST00000518678 NECTIN2Q92692 538 aa22.84■■□□□ 1.25
TRAM1-202ENST00000518678 NBPF26B4DH59 902 aa22.83■■□□□ 1.25
TRAM1-202ENST00000518678 CT47B1P0C2W7 299 aaPredicted RBP22.83■■□□□ 1.25
TRAM1-202ENST00000518678 CANXP27824 592 aaKnown RBP22.83■■□□□ 1.25
TRAM1-202ENST00000518678 CCDC30Q5VVM6 783 aa22.83■■□□□ 1.25
TRAM1-202ENST00000518678 NBPF10Q6P3W6 841 aaKnown RBP22.83■■□□□ 1.25
TRAM1-202ENST00000518678 NBPF15Q8N660 670 aa22.83■■□□□ 1.25
TRAM1-202ENST00000518678 PDIA6Q15084 440 aa22.82■■□□□ 1.24
TRAM1-202ENST00000518678 RTCBQ9Y3I0 505 aaKnown RBP22.82■■□□□ 1.24
TRAM1-202ENST00000518678 IL6STP40189 918 aaPredicted RBP22.81■■□□□ 1.24
TRAM1-202ENST00000518678 PIP4K2AP48426 406 aaPredicted RBP22.81■■□□□ 1.24
TRAM1-202ENST00000518678 COL23A1Q86Y22 540 aaPredicted RBP22.81■■□□□ 1.24
TRAM1-202ENST00000518678 DDX21Q9NR30 783 aaKnown RBP eCLIP22.81■■□□□ 1.24
TRAM1-202ENST00000518678 CHPF2Q9P2E5 772 aa22.81■■□□□ 1.24
TRAM1-202ENST00000518678 DBF4Q9UBU7 674 aaPredicted RBP22.81■■□□□ 1.24
TRAM1-202ENST00000518678 SSFA2P28290 1259 aa22.8■■□□□ 1.24
TRAM1-202ENST00000518678 EIF5P55010 431 aaKnown RBP22.8■■□□□ 1.24
TRAM1-202ENST00000518678 ARXQ96QS3 562 aa22.8■■□□□ 1.24
TRAM1-202ENST00000518678 SYT17Q9BSW7 474 aa22.8■■□□□ 1.24
TRAM1-202ENST00000518678 ZNF428Q96B54 188 aa22.79■■□□□ 1.24
TRAM1-202ENST00000518678 COL15A1P39059 1388 aa22.78■■□□□ 1.24
TRAM1-202ENST00000518678 MYL6BP14649 208 aa22.78■■□□□ 1.24
TRAM1-202ENST00000518678 ADRA2BP18089 450 aa22.78■■□□□ 1.24
TRAM1-202ENST00000518678 PROSER3Q2NL68 480 aa22.78■■□□□ 1.24
TRAM1-202ENST00000518678 MSL1Q68DK7 614 aa22.78■■□□□ 1.24
TRAM1-202ENST00000518678 LRP10Q7Z4F1 713 aa22.78■■□□□ 1.24
TRAM1-202ENST00000518678 FLAD1Q8NFF5 587 aa22.78■■□□□ 1.24
TRAM1-202ENST00000518678 STK31Q9BXU1 1019 aa22.78■■□□□ 1.24
TRAM1-202ENST00000518678 GOLGB1Q14789 3259 aaKnown RBP22.77■■□□□ 1.24
TRAM1-202ENST00000518678 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.77■■□□□ 1.24
TRAM1-202ENST00000518678 MSH5O43196 834 aa22.77■■□□□ 1.24
TRAM1-202ENST00000518678 PHF14O94880 888 aa22.77■■□□□ 1.24
TRAM1-202ENST00000518678 ANXA1P04083 346 aa22.77■■□□□ 1.24
TRAM1-202ENST00000518678 TRAPPC3LQ5T215 181 aa22.77■■□□□ 1.24
TRAM1-202ENST00000518678 TCERG1O14776 1098 aaKnown RBP22.76■■□□□ 1.23
TRAM1-202ENST00000518678 KLHL34Q8N239 644 aa22.76■■□□□ 1.23
TRAM1-202ENST00000518678 ARHGEF1Q92888 912 aaKnown RBP22.76■■□□□ 1.23
TRAM1-202ENST00000518678 HYPKQ9NX55 129 aa22.76■■□□□ 1.23
TRAM1-202ENST00000518678 ZNF330Q9Y3S2 320 aaPredicted RBP22.76■■□□□ 1.23
TRAM1-202ENST00000518678 C4AP0C0L4 1744 aa22.75■■□□□ 1.23
TRAM1-202ENST00000518678 A0A087WZG4 1122 aa22.75■■□□□ 1.23
TRAM1-202ENST00000518678 NPM2Q86SE8 214 aaKnown RBP22.75■■□□□ 1.23
TRAM1-202ENST00000518678 CACNA1FO60840 1977 aa22.74■■□□□ 1.23
TRAM1-202ENST00000518678 SLC4A2P04920 1241 aa22.74■■□□□ 1.23
TRAM1-202ENST00000518678 ALDH1L2Q3SY69 923 aa22.74■■□□□ 1.23
TRAM1-202ENST00000518678 SSH1Q8WYL5 1049 aa22.73■■□□□ 1.23
TRAM1-202ENST00000518678 RARSP54136 660 aaKnown RBP22.72■■□□□ 1.23
TRAM1-202ENST00000518678 RFC4P35249 363 aa22.71■■□□□ 1.23
TRAM1-202ENST00000518678 COPS6Q7L5N1 327 aa22.71■■□□□ 1.23
TRAM1-202ENST00000518678 DZIP3Q86Y13 1208 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms