RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 CLDN10P78369 228 aa7.48□□□□□ -1.21
PABPC1-206ENST00000518293 PLA2G4EQ3MJ16 856 aa7.48□□□□□ -1.21
PABPC1-206ENST00000518293 C4orf17Q53FE4 359 aa7.48□□□□□ -1.21
PABPC1-206ENST00000518293 EFHC2Q5JST6 749 aa7.48□□□□□ -1.21
PABPC1-206ENST00000518293 CCDC82Q8N4S0 544 aa7.48□□□□□ -1.21
PABPC1-206ENST00000518293 FHDC1Q9C0D6 1143 aaPredicted RBP7.48□□□□□ -1.21
PABPC1-206ENST00000518293 ETNK1Q9HBU6 452 aa7.48□□□□□ -1.21
PABPC1-206ENST00000518293 SERPINA10Q9UK55 444 aa7.48□□□□□ -1.21
PABPC1-206ENST00000518293 TMEM229AB2RXF0 380 aa7.47□□□□□ -1.21
PABPC1-206ENST00000518293 THBS1P07996 1170 aa7.47□□□□□ -1.21
PABPC1-206ENST00000518293 RHBDD1Q8TEB9 315 aa7.47□□□□□ -1.21
PABPC1-206ENST00000518293 CCDC97Q96F63 343 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-206ENST00000518293 RUBCNLQ9H714 662 aa7.47□□□□□ -1.21
PABPC1-206ENST00000518293 GDF2Q9UK05 429 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-206ENST00000518293 KIAA1024Q9UPX6 916 aa7.47□□□□□ -1.21
PABPC1-206ENST00000518293 MSX1P28360 303 aa7.46□□□□□ -1.22
PABPC1-206ENST00000518293 SRPK2P78362 688 aaKnown RBP7.46□□□□□ -1.22
PABPC1-206ENST00000518293 TLR1Q15399 786 aa7.46□□□□□ -1.22
PABPC1-206ENST00000518293 TRIM50Q86XT4 487 aa7.46□□□□□ -1.22
PABPC1-206ENST00000518293 OGFOD1Q8N543 542 aa7.46□□□□□ -1.22
PABPC1-206ENST00000518293 GALNT6Q8NCL4 622 aa7.46□□□□□ -1.22
PABPC1-206ENST00000518293 KLRG1Q96E93 195 aa7.46□□□□□ -1.22
PABPC1-206ENST00000518293 ATXN7L1Q9ULK2 861 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-206ENST00000518293 INHAP05111 366 aa7.45□□□□□ -1.22
PABPC1-206ENST00000518293 GDF10P55107 478 aa7.45□□□□□ -1.22
PABPC1-206ENST00000518293 CDCA8Q53HL2 280 aa7.45□□□□□ -1.22
PABPC1-206ENST00000518293 PPARGC1BQ86YN6 1023 aaKnown RBP7.45□□□□□ -1.22
PABPC1-206ENST00000518293 VRTNQ9H8Y1 702 aa7.45□□□□□ -1.22
PABPC1-206ENST00000518293 RRAGCQ9HB90 399 aa7.45□□□□□ -1.22
PABPC1-206ENST00000518293 DNAAF2Q9NVR5 837 aaKnown RBP7.45□□□□□ -1.22
PABPC1-206ENST00000518293 MKL2Q9ULH7 1088 aa7.45□□□□□ -1.22
PABPC1-206ENST00000518293 DKK1O94907 266 aa7.44□□□□□ -1.22
PABPC1-206ENST00000518293 BMP4P12644 408 aa7.44□□□□□ -1.22
PABPC1-206ENST00000518293 RASA1P20936 1047 aa7.44□□□□□ -1.22
PABPC1-206ENST00000518293 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
PABPC1-206ENST00000518293 GOLGA6L1Q8N7Z2 621 aa7.44□□□□□ -1.22
PABPC1-206ENST00000518293 EDARADDQ8WWZ3 215 aa7.44□□□□□ -1.22
PABPC1-206ENST00000518293 ABHD17AQ96GS6 310 aa7.44□□□□□ -1.22
PABPC1-206ENST00000518293 SPOCK3Q9BQ16 436 aa7.44□□□□□ -1.22
PABPC1-206ENST00000518293 SHISA8B8ZZ34 492 aa7.43□□□□□ -1.22
PABPC1-206ENST00000518293 SNRPNP63162 240 aaKnown RBP7.43□□□□□ -1.22
PABPC1-206ENST00000518293 PSME1Q06323 249 aa7.43□□□□□ -1.22
PABPC1-206ENST00000518293 UBAP2LQ14157 1087 aaKnown RBP7.43□□□□□ -1.22
PABPC1-206ENST00000518293 CRTC2Q53ET0 693 aaPredicted RBP7.43□□□□□ -1.22
PABPC1-206ENST00000518293 CCDC102BQ68D86 513 aa7.43□□□□□ -1.22
PABPC1-206ENST00000518293 LARGE2Q8N3Y3 721 aa7.43□□□□□ -1.22
PABPC1-206ENST00000518293 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.43□□□□□ -1.22
PABPC1-206ENST00000518293 ZNF594Q96JF6 807 aaPredicted RBP7.43□□□□□ -1.22
PABPC1-206ENST00000518293 SERTAD1Q9UHV2 236 aa7.43□□□□□ -1.22
PABPC1-206ENST00000518293 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-206ENST00000518293 FGFR3P22607 806 aa7.42□□□□□ -1.22
PABPC1-206ENST00000518293 AMPD1P23109 780 aa7.42□□□□□ -1.22
PABPC1-206ENST00000518293 PLA2G4AP47712 749 aa7.42□□□□□ -1.22
PABPC1-206ENST00000518293 PTK7Q13308 1070 aa7.42□□□□□ -1.22
PABPC1-206ENST00000518293 FIGNL1Q6PIW4 674 aa7.42□□□□□ -1.22
PABPC1-206ENST00000518293 SIX5Q8N196 739 aa7.42□□□□□ -1.22
PABPC1-206ENST00000518293 TPCN2Q8NHX9 752 aa7.42□□□□□ -1.22
PABPC1-206ENST00000518293 SLC4A9Q96Q91 983 aa7.42□□□□□ -1.22
PABPC1-206ENST00000518293 CRISPLD1Q9H336 500 aa7.42□□□□□ -1.22
PABPC1-206ENST00000518293 FAM196BA6NMK8 535 aa7.41□□□□□ -1.22
PABPC1-206ENST00000518293 BNIP3LO60238 219 aa7.41□□□□□ -1.22
PABPC1-206ENST00000518293 LARP1Q6PKG0 1096 aaKnown RBP7.41□□□□□ -1.22
PABPC1-206ENST00000518293 C1orf229Q6ZS94 237 aaPredicted RBP7.41□□□□□ -1.22
PABPC1-206ENST00000518293 ZNF358Q9NW07 568 aa7.41□□□□□ -1.22
PABPC1-206ENST00000518293 PROCP04070 461 aa7.4□□□□□ -1.22
PABPC1-206ENST00000518293 ITGB2P05107 769 aa7.4□□□□□ -1.22
PABPC1-206ENST00000518293 SMTNP53814 917 aa7.4□□□□□ -1.22
PABPC1-206ENST00000518293 SLCO4C1Q6ZQN7 724 aa7.4□□□□□ -1.22
PABPC1-206ENST00000518293 ALYREFQ86V81 257 aaKnown RBP7.4□□□□□ -1.22
PABPC1-206ENST00000518293 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.22
PABPC1-206ENST00000518293 AIDAQ96BJ3 306 aa7.4□□□□□ -1.22
PABPC1-206ENST00000518293 NIFKQ9BYG3 293 aaKnown RBP7.4□□□□□ -1.22
PABPC1-206ENST00000518293 NDFIP2Q9NV92 336 aa7.4□□□□□ -1.22
PABPC1-206ENST00000518293 GGA1Q9UJY5 639 aa7.4□□□□□ -1.22
PABPC1-206ENST00000518293 SFI1A8K8P3 1242 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L15C9J2P7 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L10C9JJH3 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L13C9JLJ4 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L12C9JPN9 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L11C9JVI0 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L21D6R901 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L18D6R9N7 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L22D6RA61 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L17D6RBQ6 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L19D6RCP7 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L20D6RJB6 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 PIK3R2O00459 728 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 C2CD2LO14523 706 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 ADAM23O75077 832 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 CTBSQ01459 385 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 USP17L24Q0WX57 530 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 DPYDQ12882 1025 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 MTFR1Q15390 333 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 ARXQ96QS3 562 aa7.39□□□□□ -1.23
PABPC1-206ENST00000518293 A6NJY4 79 aa7.38□□□□□ -1.23
PABPC1-206ENST00000518293 BACH1O14867 736 aa7.38□□□□□ -1.23
PABPC1-206ENST00000518293 EPHA4P54764 986 aa7.38□□□□□ -1.23
PABPC1-206ENST00000518293 ANKMY2Q8IV38 441 aa7.38□□□□□ -1.23
PABPC1-206ENST00000518293 PBXIP1Q96AQ6 731 aa7.38□□□□□ -1.23
PABPC1-206ENST00000518293 ARID3AQ99856 593 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms