RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 PPP1R1BQ9UD71 204 aaPredicted RBP27.79■■■□□ 2.04
MTCL1-204ENST00000517554 ADRA2BP18089 450 aa27.78■■■□□ 2.04
MTCL1-204ENST00000517554 LMOD3Q0VAK6 560 aa27.78■■■□□ 2.04
MTCL1-204ENST00000517554 USP16Q9Y5T5 823 aa27.78■■■□□ 2.04
MTCL1-204ENST00000517554 SOS1Q07889 1333 aaPredicted RBP27.78■■■□□ 2.04
MTCL1-204ENST00000517554 ARXQ96QS3 562 aa27.77■■■□□ 2.04
MTCL1-204ENST00000517554 STARD3NLO95772 234 aa27.76■■■□□ 2.03
MTCL1-204ENST00000517554 TEX13AQ9BXU3 409 aaPredicted RBP27.76■■■□□ 2.03
MTCL1-204ENST00000517554 C4AP0C0L4 1744 aa27.76■■■□□ 2.03
MTCL1-204ENST00000517554 SENP3-EIF4A1A0A087X0R7 540 aa27.75■■■□□ 2.03
MTCL1-204ENST00000517554 EIF4A1P60842 406 aaKnown RBP27.75■■■□□ 2.03
MTCL1-204ENST00000517554 SNRPA1P09661 255 aaKnown RBP27.74■■■□□ 2.03
MTCL1-204ENST00000517554 SRP68Q9UHB9 627 aaKnown RBP27.74■■■□□ 2.03
MTCL1-204ENST00000517554 A1BGP04217 495 aa27.73■■■□□ 2.03
MTCL1-204ENST00000517554 CANXP27824 592 aaKnown RBP27.73■■■□□ 2.03
MTCL1-204ENST00000517554 POLD1P28340 1107 aa27.73■■■□□ 2.03
MTCL1-204ENST00000517554 GYS1P13807 737 aa27.73■■■□□ 2.03
MTCL1-204ENST00000517554 RFC4P35249 363 aa27.73■■■□□ 2.03
MTCL1-204ENST00000517554 FHDC1Q9C0D6 1143 aaPredicted RBP27.73■■■□□ 2.03
MTCL1-204ENST00000517554 TSPYL4Q9UJ04 414 aa27.72■■■□□ 2.03
MTCL1-204ENST00000517554 EIF5P55010 431 aaKnown RBP27.71■■■□□ 2.03
MTCL1-204ENST00000517554 USP42Q9H9J4 1324 aaKnown RBP27.71■■■□□ 2.03
MTCL1-204ENST00000517554 COL15A1P39059 1388 aa27.71■■■□□ 2.03
MTCL1-204ENST00000517554 GIGYF1O75420 1035 aaPredicted RBP27.7■■■□□ 2.03
MTCL1-204ENST00000517554 CHL1O00533 1208 aa27.69■■■□□ 2.02
MTCL1-204ENST00000517554 PIP4K2AP48426 406 aaPredicted RBP27.69■■■□□ 2.02
MTCL1-204ENST00000517554 BABAM1Q9NWV8 329 aa27.69■■■□□ 2.02
MTCL1-204ENST00000517554 SYT17Q9BSW7 474 aa27.69■■■□□ 2.02
MTCL1-204ENST00000517554 FAM9BQ8IZU0 186 aa27.67■■■□□ 2.02
MTCL1-204ENST00000517554 NBPF26B4DH59 902 aa27.66■■■□□ 2.02
MTCL1-204ENST00000517554 FKBP8Q14318 412 aa27.66■■■□□ 2.02
MTCL1-204ENST00000517554 NBPF10Q6P3W6 841 aaKnown RBP27.66■■■□□ 2.02
MTCL1-204ENST00000517554 NBPF15Q8N660 670 aa27.66■■■□□ 2.02
MTCL1-204ENST00000517554 IL6STP40189 918 aaPredicted RBP27.65■■■□□ 2.02
MTCL1-204ENST00000517554 USPL1Q5W0Q7 1092 aa27.65■■■□□ 2.02
MTCL1-204ENST00000517554 NLGN1Q8N2Q7 840 aa27.65■■■□□ 2.02
MTCL1-204ENST00000517554 BCL2L12Q9HB09 334 aa27.65■■■□□ 2.02
MTCL1-204ENST00000517554 LAS1LQ9Y4W2 734 aaKnown RBP27.65■■■□□ 2.02
MTCL1-204ENST00000517554 MMP10P09238 476 aa27.65■■■□□ 2.02
MTCL1-204ENST00000517554 NARFQ9UHQ1 456 aa27.65■■■□□ 2.02
MTCL1-204ENST00000517554 ZNF853P0CG23 659 aa27.64■■■□□ 2.01
MTCL1-204ENST00000517554 KRT24Q2M2I5 525 aa27.63■■■□□ 2.01
MTCL1-204ENST00000517554 CFAP44Q96MT7 982 aa27.63■■■□□ 2.01
MTCL1-204ENST00000517554 LAMB4A4D0S4 1761 aa27.62■■■□□ 2.01
MTCL1-204ENST00000517554 ZPR1O75312 459 aa27.61■■■□□ 2.01
MTCL1-204ENST00000517554 ZNF330Q9Y3S2 320 aaPredicted RBP27.61■■■□□ 2.01
MTCL1-204ENST00000517554 CCDC27Q2M243 656 aa27.6■■■□□ 2.01
MTCL1-204ENST00000517554 KLHL34Q8N239 644 aa27.6■■■□□ 2.01
MTCL1-204ENST00000517554 TBC1D2BQ9UPU7 963 aa27.6■■■□□ 2.01
MTCL1-204ENST00000517554 WWC1Q8IX03 1113 aa27.6■■■□□ 2.01
MTCL1-204ENST00000517554 NLGN2Q8NFZ4 835 aa27.6■■■□□ 2.01
MTCL1-204ENST00000517554 MBIPQ9NS73 344 aa27.6■■■□□ 2.01
MTCL1-204ENST00000517554 DDR1Q08345 913 aa27.59■■■□□ 2.01
MTCL1-204ENST00000517554 TM4SF1P30408 202 aa27.58■■■□□ 2.01
MTCL1-204ENST00000517554 A0A087WZG4 1122 aa27.57■■■□□ 2
MTCL1-204ENST00000517554 DIEXFQ68CQ4 756 aaKnown RBP27.57■■■□□ 2
MTCL1-204ENST00000517554 IFT57Q9NWB7 429 aa27.57■■■□□ 2
MTCL1-204ENST00000517554 CAMTA2O94983 1202 aa27.56■■■□□ 2
MTCL1-204ENST00000517554 NCBP3Q53F19 620 aaKnown RBP27.56■■■□□ 2
MTCL1-204ENST00000517554 CCER2I3L3R5 266 aa27.55■■■□□ 2
MTCL1-204ENST00000517554 NFIXQ14938 502 aa27.55■■■□□ 2
MTCL1-204ENST00000517554 SALL2Q9Y467 1007 aaPredicted RBP27.55■■■□□ 2
MTCL1-204ENST00000517554 GNAI1P63096 354 aa27.54■■■□□ 2
MTCL1-204ENST00000517554 PDIA6Q15084 440 aa27.54■■■□□ 2
MTCL1-204ENST00000517554 DZIP3Q86Y13 1208 aaKnown RBP27.54■■■□□ 2
MTCL1-204ENST00000517554 CD2APQ9Y5K6 639 aa27.54■■■□□ 2
MTCL1-204ENST00000517554 SCN7AQ01118 1682 aa27.54■■■□□ 2
MTCL1-204ENST00000517554 POLRMTO00411 1230 aaKnown RBP27.53■■■□□ 2
MTCL1-204ENST00000517554 EIF2S2P20042 333 aaKnown RBP27.53■■■□□ 2
MTCL1-204ENST00000517554 CALD1Q05682 793 aaKnown RBP27.53■■■□□ 2
MTCL1-204ENST00000517554 LRP10Q7Z4F1 713 aa27.52■■■□□ 2
MTCL1-204ENST00000517554 PARP3Q9Y6F1 533 aa27.52■■■□□ 2
MTCL1-204ENST00000517554 MYL6BP14649 208 aa27.51■■□□□ 1.99
MTCL1-204ENST00000517554 PROSER3Q2NL68 480 aa27.51■■□□□ 1.99
MTCL1-204ENST00000517554 TBC1D9BQ66K14 1250 aa27.51■■□□□ 1.99
MTCL1-204ENST00000517554 MIER1Q8N108 512 aa27.51■■□□□ 1.99
MTCL1-204ENST00000517554 NECTIN2Q92692 538 aa27.5■■□□□ 1.99
MTCL1-204ENST00000517554 C10orf71Q711Q0 1435 aa27.49■■□□□ 1.99
MTCL1-204ENST00000517554 BCORQ6W2J9 1755 aa27.49■■□□□ 1.99
MTCL1-204ENST00000517554 ANXA1P04083 346 aa27.49■■□□□ 1.99
MTCL1-204ENST00000517554 NPM2Q86SE8 214 aaKnown RBP27.49■■□□□ 1.99
MTCL1-204ENST00000517554 NGEFQ8N5V2 710 aa27.49■■□□□ 1.99
MTCL1-204ENST00000517554 ERBB4Q15303 1308 aa27.49■■□□□ 1.99
MTCL1-204ENST00000517554 TSR2Q969E8 191 aaKnown RBP27.48■■□□□ 1.99
MTCL1-204ENST00000517554 DUSP27Q5VZP5 1158 aa27.48■■□□□ 1.99
MTCL1-204ENST00000517554 BICDL1Q6ZP65 573 aa27.48■■□□□ 1.99
MTCL1-204ENST00000517554 TTLL7Q6ZT98 887 aa27.48■■□□□ 1.99
MTCL1-204ENST00000517554 C8orf58Q8NAV2 365 aa27.47■■□□□ 1.99
MTCL1-204ENST00000517554 HOXB7P09629 217 aa27.46■■□□□ 1.99
MTCL1-204ENST00000517554 HLFQ16534 295 aa27.46■■□□□ 1.99
MTCL1-204ENST00000517554 IL16Q14005 1332 aa27.46■■□□□ 1.99
MTCL1-204ENST00000517554 KIF13BQ9NQT8 1826 aa27.46■■□□□ 1.99
MTCL1-204ENST00000517554 SPINK5Q9NQ38 1064 aaPredicted RBP27.45■■□□□ 1.99
MTCL1-204ENST00000517554 KIAA1551Q9HCM1 1747 aa27.45■■□□□ 1.98
MTCL1-204ENST00000517554 ELL2O00472 640 aaPredicted RBP27.44■■□□□ 1.98
MTCL1-204ENST00000517554 SERPINB2P05120 415 aa27.44■■□□□ 1.98
MTCL1-204ENST00000517554 NRXN2Q9P2S2 1712 aa27.44■■□□□ 1.98
MTCL1-204ENST00000517554 WDR63Q8IWG1 891 aa27.43■■□□□ 1.98
MTCL1-204ENST00000517554 GOLGB1Q14789 3259 aaKnown RBP27.43■■□□□ 1.98
MTCL1-204ENST00000517554 HDGFL1Q5TGJ6 251 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms