RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 LGR5O75473 907 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 F11P03951 625 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 ITGA6P23229 1130 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 NOS2P35228 1153 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 NBPF1Q3BBV0 1214 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 STK32AQ8WU08 396 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 L3MBTL2Q969R5 705 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 ATAD2Q6PL18 1390 aa9.33□□□□□ -0.92
SMARCA5-203ENST00000515531 SERTM1A2A2V5 107 aa9.32□□□□□ -0.92
SMARCA5-203ENST00000515531 H7C1W4 665 aa9.32□□□□□ -0.92
SMARCA5-203ENST00000515531 PPP1R12BO60237 982 aaPredicted RBP9.32□□□□□ -0.92
SMARCA5-203ENST00000515531 CSB-PGBD3P0DP91 1061 aa9.32□□□□□ -0.92
SMARCA5-203ENST00000515531 TEAD4Q15561 434 aa9.32□□□□□ -0.92
SMARCA5-203ENST00000515531 SWI5Q1ZZU3 235 aa9.32□□□□□ -0.92
SMARCA5-203ENST00000515531 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
SMARCA5-203ENST00000515531 TMEM164Q5U3C3 297 aa9.32□□□□□ -0.92
SMARCA5-203ENST00000515531 PGBD3Q8N328 593 aa9.32□□□□□ -0.92
SMARCA5-203ENST00000515531 H3BM21 787 aa9.31□□□□□ -0.92
SMARCA5-203ENST00000515531 TATP17735 454 aaPredicted RBP9.31□□□□□ -0.92
SMARCA5-203ENST00000515531 MSX1P28360 303 aa9.31□□□□□ -0.92
SMARCA5-203ENST00000515531 GPAMQ9HCL2 828 aa9.31□□□□□ -0.92
SMARCA5-203ENST00000515531 CDC14CA4D256 554 aa9.3□□□□□ -0.92
SMARCA5-203ENST00000515531 FAM181BA6NEQ2 426 aa9.3□□□□□ -0.92
SMARCA5-203ENST00000515531 WIPF1O43516 503 aa9.3□□□□□ -0.92
SMARCA5-203ENST00000515531 C1orf216Q8TAB5 229 aa9.3□□□□□ -0.92
SMARCA5-203ENST00000515531 IGFBP4P22692 258 aa9.29□□□□□ -0.92
SMARCA5-203ENST00000515531 ARSJQ5FYB0 599 aaPredicted RBP9.29□□□□□ -0.92
SMARCA5-203ENST00000515531 ZNF295-AS1Q8N0V1 137 aa9.29□□□□□ -0.92
SMARCA5-203ENST00000515531 ZDHHC1Q8WTX9 485 aa9.29□□□□□ -0.92
SMARCA5-203ENST00000515531 IRF7Q92985 503 aa9.29□□□□□ -0.92
SMARCA5-203ENST00000515531 GMCL1Q96IK5 515 aa9.29□□□□□ -0.92
SMARCA5-203ENST00000515531 ZDHHC3Q9NYG2 299 aa9.29□□□□□ -0.92
SMARCA5-203ENST00000515531 C21orf2O43822 256 aa9.28□□□□□ -0.92
SMARCA5-203ENST00000515531 PRMT3O60678 531 aa9.28□□□□□ -0.92
SMARCA5-203ENST00000515531 NFX1Q12986 1120 aaKnown RBP9.28□□□□□ -0.92
SMARCA5-203ENST00000515531 BICDL1Q6ZP65 573 aa9.28□□□□□ -0.92
SMARCA5-203ENST00000515531 SV2AQ7L0J3 742 aa9.28□□□□□ -0.92
SMARCA5-203ENST00000515531 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
SMARCA5-203ENST00000515531 STAG2Q8N3U4 1231 aa9.28□□□□□ -0.92
SMARCA5-203ENST00000515531 VTI1AQ96AJ9 217 aa9.28□□□□□ -0.92
SMARCA5-203ENST00000515531 HCN4Q9Y3Q4 1203 aa9.28□□□□□ -0.92
SMARCA5-203ENST00000515531 WEE1P30291 646 aa9.27□□□□□ -0.93
SMARCA5-203ENST00000515531 FAM69CQ0P6D2 419 aa9.27□□□□□ -0.93
SMARCA5-203ENST00000515531 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
SMARCA5-203ENST00000515531 FOXR1Q6PIV2 292 aa9.27□□□□□ -0.93
SMARCA5-203ENST00000515531 VWA5B2Q8N398 1253 aa9.27□□□□□ -0.93
SMARCA5-203ENST00000515531 NANOS1Q8WY41 292 aaKnown RBP9.27□□□□□ -0.93
SMARCA5-203ENST00000515531 PRIMPOLQ96LW4 560 aa9.27□□□□□ -0.93
SMARCA5-203ENST00000515531 NUCKS1Q9H1E3 243 aaKnown RBP9.27□□□□□ -0.93
SMARCA5-203ENST00000515531 RUBCNLQ9H714 662 aa9.27□□□□□ -0.93
SMARCA5-203ENST00000515531 EML1O00423 815 aa9.26□□□□□ -0.93
SMARCA5-203ENST00000515531 TXLNAP40222 546 aa9.26□□□□□ -0.93
SMARCA5-203ENST00000515531 DBN1Q16643 649 aa9.26□□□□□ -0.93
SMARCA5-203ENST00000515531 C2orf49Q9BVC5 232 aaPredicted RBP9.26□□□□□ -0.93
SMARCA5-203ENST00000515531 NEUROD4Q9HD90 331 aa9.26□□□□□ -0.93
SMARCA5-203ENST00000515531 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMARCA5-203ENST00000515531 CUEDC1Q9NWM3 386 aaPredicted RBP9.26□□□□□ -0.93
SMARCA5-203ENST00000515531 FOXO3O43524 673 aa9.25□□□□□ -0.93
SMARCA5-203ENST00000515531 SH3PXD2AQ5TCZ1 1133 aa9.25□□□□□ -0.93
SMARCA5-203ENST00000515531 CLP1Q92989 425 aaKnown RBP9.25□□□□□ -0.93
SMARCA5-203ENST00000515531 NGLY1Q96IV0 654 aa9.25□□□□□ -0.93
SMARCA5-203ENST00000515531 GJA3Q9Y6H8 435 aa9.25□□□□□ -0.93
SMARCA5-203ENST00000515531 ATP4AP20648 1035 aa9.24□□□□□ -0.93
SMARCA5-203ENST00000515531 HIRAP54198 1017 aaPredicted RBP9.24□□□□□ -0.93
SMARCA5-203ENST00000515531 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
SMARCA5-203ENST00000515531 RHPN1Q8TCX5 695 aa9.24□□□□□ -0.93
SMARCA5-203ENST00000515531 PHACTR1Q9C0D0 580 aa9.24□□□□□ -0.93
SMARCA5-203ENST00000515531 CRISPLD1Q9H336 500 aa9.24□□□□□ -0.93
SMARCA5-203ENST00000515531 A0A1W2PNR3 127 aa9.23□□□□□ -0.93
SMARCA5-203ENST00000515531 PDE4CQ08493 712 aa9.23□□□□□ -0.93
SMARCA5-203ENST00000515531 C1orf53Q5VUE5 145 aa9.23□□□□□ -0.93
SMARCA5-203ENST00000515531 POTEAQ6S8J7 498 aa9.23□□□□□ -0.93
SMARCA5-203ENST00000515531 ALDH16A1Q8IZ83 802 aa9.23□□□□□ -0.93
SMARCA5-203ENST00000515531 ZNF837Q96EG3 531 aaPredicted RBP9.23□□□□□ -0.93
SMARCA5-203ENST00000515531 TRERF1Q96PN7 1200 aa9.23□□□□□ -0.93
SMARCA5-203ENST00000515531 VSIG8P0DPA2 414 aa9.22□□□□□ -0.93
SMARCA5-203ENST00000515531 NLRP8Q86W28 1048 aa9.22□□□□□ -0.93
SMARCA5-203ENST00000515531 GTPBP3Q969Y2 492 aaKnown RBP9.22□□□□□ -0.93
SMARCA5-203ENST00000515531 ZIC5Q96T25 663 aa9.22□□□□□ -0.93
SMARCA5-203ENST00000515531 GPC6Q9Y625 555 aaPredicted RBP9.22□□□□□ -0.93
SMARCA5-203ENST00000515531 ERBB4Q15303 1308 aa9.22□□□□□ -0.93
SMARCA5-203ENST00000515531 TMEM88BA6NKF7 163 aa9.21□□□□□ -0.94
SMARCA5-203ENST00000515531 ATP2B4P23634 1241 aa9.21□□□□□ -0.94
SMARCA5-203ENST00000515531 OCLNQ16625 522 aa9.21□□□□□ -0.94
SMARCA5-203ENST00000515531 FIGNL1Q6PIW4 674 aa9.21□□□□□ -0.94
SMARCA5-203ENST00000515531 CXXC1Q9P0U4 656 aaPredicted RBP9.21□□□□□ -0.94
SMARCA5-203ENST00000515531 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
SMARCA5-203ENST00000515531 FKBP5Q13451 457 aaPredicted RBP9.2□□□□□ -0.94
SMARCA5-203ENST00000515531 ANKIB1Q9P2G1 1089 aa9.2□□□□□ -0.94
SMARCA5-203ENST00000515531 HIF1AQ16665 826 aa9.19□□□□□ -0.94
SMARCA5-203ENST00000515531 GPR161Q8N6U8 529 aaKnown RBP9.19□□□□□ -0.94
SMARCA5-203ENST00000515531 RETREG2Q8NC44 543 aa9.19□□□□□ -0.94
SMARCA5-203ENST00000515531 PHF24Q9UPV7 400 aa9.19□□□□□ -0.94
SMARCA5-203ENST00000515531 CARNS1A5YM72 827 aa9.18□□□□□ -0.94
SMARCA5-203ENST00000515531 GPR25O00155 361 aa9.18□□□□□ -0.94
SMARCA5-203ENST00000515531 PTCD1O75127 700 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms