RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 SOWAHBA6NEL2 793 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 SCNN1DP51172 638 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 ZNF654Q8IZM8 581 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 STAG2Q8N3U4 1231 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 ZNF511Q8NB15 262 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 BAP1Q92560 729 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 FRMD6Q96NE9 622 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 TSPAN10Q9H1Z9 355 aaPredicted RBP9.67□□□□□ -0.86
NPHP3-211ENST00000515289 PIF1Q9H611 641 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 DDX41Q9UJV9 622 aaKnown RBP9.67□□□□□ -0.86
NPHP3-211ENST00000515289 INPP5FQ9Y2H2 1132 aa9.67□□□□□ -0.86
NPHP3-211ENST00000515289 COX20Q5RI15 118 aa9.66□□□□□ -0.86
NPHP3-211ENST00000515289 PMFBP1Q8TBY8 1022 aa9.66□□□□□ -0.86
NPHP3-211ENST00000515289 FBF1Q8TES7 1133 aa9.66□□□□□ -0.86
NPHP3-211ENST00000515289 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
NPHP3-211ENST00000515289 NIF3L1Q9GZT8 377 aa9.66□□□□□ -0.86
NPHP3-211ENST00000515289 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.66□□□□□ -0.86
NPHP3-211ENST00000515289 ERBB3P21860 1342 aa9.65□□□□□ -0.86
NPHP3-211ENST00000515289 SCTRP47872 440 aa9.65□□□□□ -0.86
NPHP3-211ENST00000515289 GDF10P55107 478 aa9.65□□□□□ -0.86
NPHP3-211ENST00000515289 GJD3Q8N144 294 aa9.65□□□□□ -0.86
NPHP3-211ENST00000515289 CHMP7Q8WUX9 453 aaPredicted RBP9.65□□□□□ -0.86
NPHP3-211ENST00000515289 ZSWIM4Q9H7M6 989 aa9.65□□□□□ -0.86
NPHP3-211ENST00000515289 A0A1W2PRU2 124 aa9.64□□□□□ -0.87
NPHP3-211ENST00000515289 PPP1R12BO60237 982 aaPredicted RBP9.64□□□□□ -0.87
NPHP3-211ENST00000515289 ERVK-9P63128 1117 aa9.64□□□□□ -0.87
NPHP3-211ENST00000515289 PPP1R18Q6NYC8 613 aa9.64□□□□□ -0.87
NPHP3-211ENST00000515289 AK5Q9Y6K8 562 aa9.64□□□□□ -0.87
NPHP3-211ENST00000515289 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
NPHP3-211ENST00000515289 ADH1BP00325 375 aa9.63□□□□□ -0.87
NPHP3-211ENST00000515289 USP5P45974 858 aa9.63□□□□□ -0.87
NPHP3-211ENST00000515289 SLC4A9Q96Q91 983 aa9.63□□□□□ -0.87
NPHP3-211ENST00000515289 C2orf49Q9BVC5 232 aaPredicted RBP9.63□□□□□ -0.87
NPHP3-211ENST00000515289 OSBPL2Q9H1P3 480 aa9.63□□□□□ -0.87
NPHP3-211ENST00000515289 ESF1Q9H501 851 aaKnown RBP9.63□□□□□ -0.87
NPHP3-211ENST00000515289 TTBK1Q5TCY1 1321 aaPredicted RBP9.62□□□□□ -0.87
NPHP3-211ENST00000515289 INHAP05111 366 aa9.62□□□□□ -0.87
NPHP3-211ENST00000515289 CTSHP09668 335 aa9.62□□□□□ -0.87
NPHP3-211ENST00000515289 FOXK2Q01167 660 aa9.62□□□□□ -0.87
NPHP3-211ENST00000515289 PTPN12Q05209 780 aaKnown RBP9.62□□□□□ -0.87
NPHP3-211ENST00000515289 LINC01559Q495D7 138 aa9.62□□□□□ -0.87
NPHP3-211ENST00000515289 ZNF746Q6NUN9 644 aaPredicted RBP9.62□□□□□ -0.87
NPHP3-211ENST00000515289 VPS37DQ86XT2 251 aa9.62□□□□□ -0.87
NPHP3-211ENST00000515289 NLGN1Q8N2Q7 840 aa9.62□□□□□ -0.87
NPHP3-211ENST00000515289 MYO19Q96H55 970 aa9.62□□□□□ -0.87
NPHP3-211ENST00000515289 KCTD15Q96SI1 283 aaPredicted RBP9.62□□□□□ -0.87
NPHP3-211ENST00000515289 CFHR5Q9BXR6 569 aa9.62□□□□□ -0.87
NPHP3-211ENST00000515289 QTRT2Q9H974 415 aaKnown RBP9.62□□□□□ -0.87
NPHP3-211ENST00000515289 BCAMP50895 628 aa9.61□□□□□ -0.87
NPHP3-211ENST00000515289 RACK1P63244 317 aaKnown RBP9.61□□□□□ -0.87
NPHP3-211ENST00000515289 ZNF394Q53GI3 561 aa9.61□□□□□ -0.87
NPHP3-211ENST00000515289 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
NPHP3-211ENST00000515289 TRIM52Q96A61 297 aa9.61□□□□□ -0.87
NPHP3-211ENST00000515289 SPACA7Q96KW9 195 aa9.61□□□□□ -0.87
NPHP3-211ENST00000515289 POLIQ9UNA4 740 aa9.61□□□□□ -0.87
NPHP3-211ENST00000515289 ZBTB39O15060 712 aa9.6□□□□□ -0.87
NPHP3-211ENST00000515289 MZF1P28698 734 aaPredicted RBP9.6□□□□□ -0.87
NPHP3-211ENST00000515289 RAB15P59190 212 aa9.6□□□□□ -0.87
NPHP3-211ENST00000515289 USP48Q86UV5 1035 aa9.6□□□□□ -0.87
NPHP3-211ENST00000515289 MCF2L2Q86YR7 1114 aa9.6□□□□□ -0.87
NPHP3-211ENST00000515289 OSBPL3Q9H4L5 887 aa9.6□□□□□ -0.87
NPHP3-211ENST00000515289 ABCC8Q09428 1581 aa9.59□□□□□ -0.87
NPHP3-211ENST00000515289 ERVH48-1M5A8F1 160 aa9.59□□□□□ -0.87
NPHP3-211ENST00000515289 ZBTB24O43167 697 aaPredicted RBP9.59□□□□□ -0.87
NPHP3-211ENST00000515289 STK10O94804 968 aaKnown RBP9.59□□□□□ -0.87
NPHP3-211ENST00000515289 FGRP09769 529 aa9.59□□□□□ -0.87
NPHP3-211ENST00000515289 BRD2P25440 801 aaKnown RBP9.59□□□□□ -0.87
NPHP3-211ENST00000515289 COPS2P61201 443 aa9.59□□□□□ -0.87
NPHP3-211ENST00000515289 ZNF687Q8N1G0 1237 aa9.59□□□□□ -0.87
NPHP3-211ENST00000515289 CSRNP1Q96S65 589 aa9.59□□□□□ -0.87
NPHP3-211ENST00000515289 SRA1Q9HD15 236 aaKnown RBP9.59□□□□□ -0.87
NPHP3-211ENST00000515289 SCHIP1Q9P0W5 487 aaPredicted RBP9.59□□□□□ -0.87
NPHP3-211ENST00000515289 SERTAD1Q9UHV2 236 aa9.59□□□□□ -0.87
NPHP3-211ENST00000515289 LRFN2Q9ULH4 789 aa9.59□□□□□ -0.87
NPHP3-211ENST00000515289 PCDHGB7Q9Y5F8 929 aa9.59□□□□□ -0.87
NPHP3-211ENST00000515289 GOLGA8CPA6NN73 597 aa9.58□□□□□ -0.88
NPHP3-211ENST00000515289 MARCH6O60337 910 aa9.58□□□□□ -0.88
NPHP3-211ENST00000515289 PSMA6P60900 246 aaKnown RBP9.58□□□□□ -0.88
NPHP3-211ENST00000515289 INTS6LQ5JSJ4 861 aaKnown RBP9.58□□□□□ -0.88
NPHP3-211ENST00000515289 HS2ST1Q7LGA3 356 aa9.58□□□□□ -0.88
NPHP3-211ENST00000515289 ATCAYQ86WG3 371 aa9.58□□□□□ -0.88
NPHP3-211ENST00000515289 SLC9A9Q8IVB4 645 aa9.58□□□□□ -0.88
NPHP3-211ENST00000515289 GPATCH3Q96I76 525 aa9.58□□□□□ -0.88
NPHP3-211ENST00000515289 ETNK1Q9HBU6 452 aa9.58□□□□□ -0.88
NPHP3-211ENST00000515289 SPG7Q9UQ90 795 aa9.58□□□□□ -0.88
NPHP3-211ENST00000515289 MAP4K5Q9Y4K4 846 aa9.58□□□□□ -0.88
NPHP3-211ENST00000515289 CC2D2AQ9P2K1 1620 aa9.57□□□□□ -0.88
NPHP3-211ENST00000515289 TLL1O43897 1013 aa9.57□□□□□ -0.88
NPHP3-211ENST00000515289 STAU1O95793 577 aaKnown RBP9.57□□□□□ -0.88
NPHP3-211ENST00000515289 GJA8P48165 433 aa9.57□□□□□ -0.88
NPHP3-211ENST00000515289 ADGRD1Q6QNK2 874 aa9.57□□□□□ -0.88
NPHP3-211ENST00000515289 POTEAQ6S8J7 498 aa9.57□□□□□ -0.88
NPHP3-211ENST00000515289 HRO43593 1189 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 RAB11FIP3O75154 756 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 EIF4BP23588 611 aaKnown RBP9.56□□□□□ -0.88
NPHP3-211ENST00000515289 TCEAL1Q15170 157 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 MTFR1Q15390 333 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 NFE2L2Q16236 605 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 PTPROQ16827 1216 aa9.56□□□□□ -0.88
NPHP3-211ENST00000515289 FAM26DQ5JW98 314 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms