RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
COPB2-212ENST00000514508 SNRPA1P09661 255 aaKnown RBP16.26■□□□□ 0.19
COPB2-212ENST00000514508 POLD1P28340 1107 aa16.26■□□□□ 0.19
COPB2-212ENST00000514508 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
COPB2-212ENST00000514508 RFC4P35249 363 aa16.25■□□□□ 0.19
COPB2-212ENST00000514508 ARHGEF1Q92888 912 aaKnown RBP16.25■□□□□ 0.19
COPB2-212ENST00000514508 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
COPB2-212ENST00000514508 ZBTB1Q9Y2K1 713 aa16.24■□□□□ 0.19
COPB2-212ENST00000514508 SRCAPQ6ZRS2 3230 aa16.24■□□□□ 0.19
COPB2-212ENST00000514508 SOS1Q07889 1333 aaPredicted RBP16.23■□□□□ 0.19
COPB2-212ENST00000514508 EIF4A1P60842 406 aaKnown RBP16.23■□□□□ 0.19
COPB2-212ENST00000514508 ARXQ96QS3 562 aa16.23■□□□□ 0.19
COPB2-212ENST00000514508 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
COPB2-212ENST00000514508 MSL1Q68DK7 614 aa16.22■□□□□ 0.19
COPB2-212ENST00000514508 USP16Q9Y5T5 823 aa16.22■□□□□ 0.19
COPB2-212ENST00000514508 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
COPB2-212ENST00000514508 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
COPB2-212ENST00000514508 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.19
COPB2-212ENST00000514508 NCBP3Q53F19 620 aaKnown RBP16.21■□□□□ 0.19
COPB2-212ENST00000514508 FAM9BQ8IZU0 186 aa16.21■□□□□ 0.19
COPB2-212ENST00000514508 NLGN1Q8N2Q7 840 aa16.21■□□□□ 0.19
COPB2-212ENST00000514508 COL15A1P39059 1388 aa16.21■□□□□ 0.19
COPB2-212ENST00000514508 PRAMEF22A3QJZ6 481 aa16.2■□□□□ 0.18
COPB2-212ENST00000514508 CHL1O00533 1208 aa16.2■□□□□ 0.18
COPB2-212ENST00000514508 GIGYF1O75420 1035 aaPredicted RBP16.2■□□□□ 0.18
COPB2-212ENST00000514508 EIF5P55010 431 aaKnown RBP16.2■□□□□ 0.18
COPB2-212ENST00000514508 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
COPB2-212ENST00000514508 A0A087WZG4 1122 aa16.19■□□□□ 0.18
COPB2-212ENST00000514508 CCER2I3L3R5 266 aa16.19■□□□□ 0.18
COPB2-212ENST00000514508 ZPR1O75312 459 aa16.19■□□□□ 0.18
COPB2-212ENST00000514508 A1BGP04217 495 aa16.19■□□□□ 0.18
COPB2-212ENST00000514508 GYS1P13807 737 aa16.19■□□□□ 0.18
COPB2-212ENST00000514508 CCDC27Q2M243 656 aa16.19■□□□□ 0.18
COPB2-212ENST00000514508 DIEXFQ68CQ4 756 aaKnown RBP16.19■□□□□ 0.18
COPB2-212ENST00000514508 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
COPB2-212ENST00000514508 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
COPB2-212ENST00000514508 NARFQ9UHQ1 456 aa16.19■□□□□ 0.18
COPB2-212ENST00000514508 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
COPB2-212ENST00000514508 FHDC1Q9C0D6 1143 aaPredicted RBP16.18■□□□□ 0.18
COPB2-212ENST00000514508 GNAI1P63096 354 aa16.17■□□□□ 0.18
COPB2-212ENST00000514508 SYT17Q9BSW7 474 aa16.17■□□□□ 0.18
COPB2-212ENST00000514508 IFT57Q9NWB7 429 aa16.17■□□□□ 0.18
COPB2-212ENST00000514508 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
COPB2-212ENST00000514508 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
COPB2-212ENST00000514508 USPL1Q5W0Q7 1092 aa16.16■□□□□ 0.18
COPB2-212ENST00000514508 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
COPB2-212ENST00000514508 MMP10P09238 476 aa16.15■□□□□ 0.18
COPB2-212ENST00000514508 WWC1Q8IX03 1113 aa16.15■□□□□ 0.18
COPB2-212ENST00000514508 NBPF26B4DH59 902 aa16.14■□□□□ 0.17
COPB2-212ENST00000514508 FKBP8Q14318 412 aa16.14■□□□□ 0.17
COPB2-212ENST00000514508 NBPF10Q6P3W6 841 aaKnown RBP16.14■□□□□ 0.17
COPB2-212ENST00000514508 KLHL34Q8N239 644 aa16.14■□□□□ 0.17
COPB2-212ENST00000514508 NGEFQ8N5V2 710 aa16.14■□□□□ 0.17
COPB2-212ENST00000514508 NBPF15Q8N660 670 aa16.14■□□□□ 0.17
COPB2-212ENST00000514508 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
COPB2-212ENST00000514508 ERBB4Q15303 1308 aa16.14■□□□□ 0.17
COPB2-212ENST00000514508 PIP4K2AP48426 406 aaPredicted RBP16.13■□□□□ 0.17
COPB2-212ENST00000514508 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
COPB2-212ENST00000514508 CD2APQ9Y5K6 639 aa16.13■□□□□ 0.17
COPB2-212ENST00000514508 PARP3Q9Y6F1 533 aa16.13■□□□□ 0.17
COPB2-212ENST00000514508 SCN7AQ01118 1682 aa16.13■□□□□ 0.17
COPB2-212ENST00000514508 SENP3-EIF4A1A0A087X0R7 540 aa16.12■□□□□ 0.17
COPB2-212ENST00000514508 HOXB7P09629 217 aa16.12■□□□□ 0.17
COPB2-212ENST00000514508 DZIP3Q86Y13 1208 aaKnown RBP16.12■□□□□ 0.17
COPB2-212ENST00000514508 BCL2L12Q9HB09 334 aa16.12■□□□□ 0.17
COPB2-212ENST00000514508 BCORQ6W2J9 1755 aa16.12■□□□□ 0.17
COPB2-212ENST00000514508 IL16Q14005 1332 aa16.12■□□□□ 0.17
COPB2-212ENST00000514508 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
COPB2-212ENST00000514508 TM4SF1P30408 202 aa16.11■□□□□ 0.17
COPB2-212ENST00000514508 CAMTA2O94983 1202 aa16.1■□□□□ 0.17
COPB2-212ENST00000514508 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
COPB2-212ENST00000514508 WDR63Q8IWG1 891 aa16.1■□□□□ 0.17
COPB2-212ENST00000514508 SALL2Q9Y467 1007 aaPredicted RBP16.1■□□□□ 0.17
COPB2-212ENST00000514508 KIF13BQ9NQT8 1826 aa16.1■□□□□ 0.17
COPB2-212ENST00000514508 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
COPB2-212ENST00000514508 RGL2O15211 777 aa16.09■□□□□ 0.17
COPB2-212ENST00000514508 DDR1Q08345 913 aa16.09■□□□□ 0.17
COPB2-212ENST00000514508 NFIXQ14938 502 aa16.09■□□□□ 0.17
COPB2-212ENST00000514508 AFDNP55196 1824 aaKnown RBP16.08■□□□□ 0.17
COPB2-212ENST00000514508 POLRMTO00411 1230 aaKnown RBP16.08■□□□□ 0.16
COPB2-212ENST00000514508 MYL6BP14649 208 aa16.08■□□□□ 0.16
COPB2-212ENST00000514508 DUSP27Q5VZP5 1158 aa16.08■□□□□ 0.16
COPB2-212ENST00000514508 CLEC4GQ6UXB4 293 aa16.08■□□□□ 0.16
COPB2-212ENST00000514508 MIER1Q8N108 512 aa16.08■□□□□ 0.16
COPB2-212ENST00000514508 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
COPB2-212ENST00000514508 PDIA6Q15084 440 aa16.07■□□□□ 0.16
COPB2-212ENST00000514508 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
COPB2-212ENST00000514508 NLGN2Q8NFZ4 835 aa16.07■□□□□ 0.16
COPB2-212ENST00000514508 NUP98P52948 1817 aa16.06■□□□□ 0.16
COPB2-212ENST00000514508 NRXN2Q9P2S2 1712 aa16.06■□□□□ 0.16
COPB2-212ENST00000514508 C10orf71Q711Q0 1435 aa16.06■□□□□ 0.16
COPB2-212ENST00000514508 TBC1D9BQ66K14 1250 aa16.06■□□□□ 0.16
COPB2-212ENST00000514508 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
COPB2-212ENST00000514508 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
COPB2-212ENST00000514508 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
COPB2-212ENST00000514508 DDX21Q9NR30 783 aaKnown RBP eCLIP16.06■□□□□ 0.16
COPB2-212ENST00000514508 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
COPB2-212ENST00000514508 SERPINB2P05120 415 aa16.05■□□□□ 0.16
COPB2-212ENST00000514508 C8orf58Q8NAV2 365 aa16.05■□□□□ 0.16
COPB2-212ENST00000514508 NECTIN2Q92692 538 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms