RNA–Protein interactions for RNA: ENST00000514131.1

CSNK1G3-208, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 5

Gene CSNK1G3, Length 253 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-208ENST00000514131 MSX1P28360 303 aa11.93□□□□□ -0.5
CSNK1G3-208ENST00000514131 GPR161Q8N6U8 529 aaKnown RBP11.93□□□□□ -0.5
CSNK1G3-208ENST00000514131 NANOS1Q8WY41 292 aaKnown RBP11.93□□□□□ -0.5
CSNK1G3-208ENST00000514131 HINFPQ9BQA5 517 aa11.93□□□□□ -0.5
CSNK1G3-208ENST00000514131 TSPAN10Q9H1Z9 355 aaPredicted RBP11.93□□□□□ -0.5
CSNK1G3-208ENST00000514131 GMPRP36959 345 aa11.92□□□□□ -0.5
CSNK1G3-208ENST00000514131 DBN1Q16643 649 aa11.92□□□□□ -0.5
CSNK1G3-208ENST00000514131 SV2AQ7L0J3 742 aa11.92□□□□□ -0.5
CSNK1G3-208ENST00000514131 NOVA2Q9UNW9 492 aaKnown RBP11.92□□□□□ -0.5
CSNK1G3-208ENST00000514131 TRIM22Q8IYM9 498 aa11.91□□□□□ -0.5
CSNK1G3-208ENST00000514131 FAM200AQ8TCP9 573 aa11.91□□□□□ -0.5
CSNK1G3-208ENST00000514131 ZDHHC1Q8WTX9 485 aa11.91□□□□□ -0.5
CSNK1G3-208ENST00000514131 PBXIP1Q96AQ6 731 aa11.91□□□□□ -0.5
CSNK1G3-208ENST00000514131 RUBCNLQ9H714 662 aa11.9□□□□□ -0.5
CSNK1G3-208ENST00000514131 H7C1W4 665 aa11.89□□□□□ -0.51
CSNK1G3-208ENST00000514131 TEAD4Q15561 434 aa11.89□□□□□ -0.51
CSNK1G3-208ENST00000514131 L3MBTL2Q969R5 705 aa11.89□□□□□ -0.51
CSNK1G3-208ENST00000514131 ZNF837Q96EG3 531 aaPredicted RBP11.89□□□□□ -0.51
CSNK1G3-208ENST00000514131 ZNF232Q9UNY5 417 aa11.89□□□□□ -0.51
CSNK1G3-208ENST00000514131 NOS2P35228 1153 aa11.88□□□□□ -0.51
CSNK1G3-208ENST00000514131 SCG3Q8WXD2 468 aaKnown RBP11.88□□□□□ -0.51
CSNK1G3-208ENST00000514131 SERTM1A2A2V5 107 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 C21orf2O43822 256 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 ATG7O95352 703 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 CSB-PGBD3P0DP91 1061 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 NBPF1Q3BBV0 1214 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 PGBD3Q8N328 593 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 GAS2L2Q8NHY3 880 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 GMCL1Q96IK5 515 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 NUCKS1Q9H1E3 243 aaKnown RBP11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 ZMIZ1Q9ULJ6 1067 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 ATAD2Q6PL18 1390 aa11.87□□□□□ -0.51
CSNK1G3-208ENST00000514131 PPP1R12BO60237 982 aaPredicted RBP11.86□□□□□ -0.51
CSNK1G3-208ENST00000514131 ATP4AP20648 1035 aa11.86□□□□□ -0.51
CSNK1G3-208ENST00000514131 TXLNAP40222 546 aa11.86□□□□□ -0.51
CSNK1G3-208ENST00000514131 ELOAQ14241 798 aaKnown RBP11.86□□□□□ -0.51
CSNK1G3-208ENST00000514131 SH3PXD2AQ5TCZ1 1133 aa11.86□□□□□ -0.51
CSNK1G3-208ENST00000514131 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
CSNK1G3-208ENST00000514131 GTPBP3Q969Y2 492 aaKnown RBP11.86□□□□□ -0.51
CSNK1G3-208ENST00000514131 PSMA6P60900 246 aaKnown RBP11.85□□□□□ -0.51
CSNK1G3-208ENST00000514131 C1orf216Q8TAB5 229 aa11.85□□□□□ -0.51
CSNK1G3-208ENST00000514131 CHMP7Q8WUX9 453 aaPredicted RBP11.85□□□□□ -0.51
CSNK1G3-208ENST00000514131 ARID3AQ99856 593 aa11.85□□□□□ -0.51
CSNK1G3-208ENST00000514131 GPR25O00155 361 aa11.84□□□□□ -0.51
CSNK1G3-208ENST00000514131 EML1O00423 815 aa11.84□□□□□ -0.51
CSNK1G3-208ENST00000514131 THBS1P07996 1170 aa11.84□□□□□ -0.51
CSNK1G3-208ENST00000514131 TATP17735 454 aaPredicted RBP11.84□□□□□ -0.51
CSNK1G3-208ENST00000514131 ARSJQ5FYB0 599 aaPredicted RBP11.84□□□□□ -0.51
CSNK1G3-208ENST00000514131 ZDHHC3Q9NYG2 299 aa11.84□□□□□ -0.51
CSNK1G3-208ENST00000514131 WIPF1O43516 503 aa11.83□□□□□ -0.52
CSNK1G3-208ENST00000514131 FOXR1Q6PIV2 292 aa11.83□□□□□ -0.52
CSNK1G3-208ENST00000514131 COL25A1Q9BXS0 654 aaPredicted RBP11.83□□□□□ -0.52
CSNK1G3-208ENST00000514131 CHMP3Q9Y3E7 222 aa11.83□□□□□ -0.52
CSNK1G3-208ENST00000514131 HCN4Q9Y3Q4 1203 aa11.83□□□□□ -0.52
CSNK1G3-208ENST00000514131 EFHC2Q5JST6 749 aa11.82□□□□□ -0.52
CSNK1G3-208ENST00000514131 RNFT1Q5M7Z0 435 aa11.82□□□□□ -0.52
CSNK1G3-208ENST00000514131 CRISPLD1Q9H336 500 aa11.82□□□□□ -0.52
CSNK1G3-208ENST00000514131 KRT76Q01546 638 aa11.81□□□□□ -0.52
CSNK1G3-208ENST00000514131 A0A1W2PNR3 127 aa11.8□□□□□ -0.52
CSNK1G3-208ENST00000514131 TMEM164Q5U3C3 297 aa11.8□□□□□ -0.52
CSNK1G3-208ENST00000514131 BICDL1Q6ZP65 573 aa11.8□□□□□ -0.52
CSNK1G3-208ENST00000514131 CNTNAP3BQ96NU0 1288 aa11.8□□□□□ -0.52
CSNK1G3-208ENST00000514131 ZIC5Q96T25 663 aa11.8□□□□□ -0.52
CSNK1G3-208ENST00000514131 C2orf49Q9BVC5 232 aaPredicted RBP11.8□□□□□ -0.52
CSNK1G3-208ENST00000514131 CNTNAP3Q9BZ76 1288 aa11.8□□□□□ -0.52
CSNK1G3-208ENST00000514131 ACIN1Q9UKV3 1341 aaKnown RBP11.8□□□□□ -0.52
CSNK1G3-208ENST00000514131 IGFBP4P22692 258 aa11.79□□□□□ -0.52
CSNK1G3-208ENST00000514131 WEE1P30291 646 aa11.79□□□□□ -0.52
CSNK1G3-208ENST00000514131 FAM69CQ0P6D2 419 aa11.79□□□□□ -0.52
CSNK1G3-208ENST00000514131 LBRQ14739 615 aaKnown RBP11.79□□□□□ -0.52
CSNK1G3-208ENST00000514131 TRERF1Q96PN7 1200 aa11.79□□□□□ -0.52
CSNK1G3-208ENST00000514131 PPP1R15AO75807 674 aaPredicted RBP11.78□□□□□ -0.52
CSNK1G3-208ENST00000514131 HIRAP54198 1017 aaPredicted RBP11.78□□□□□ -0.52
CSNK1G3-208ENST00000514131 UBAP2LQ14157 1087 aaKnown RBP11.78□□□□□ -0.52
CSNK1G3-208ENST00000514131 GAS6Q14393 721 aa11.78□□□□□ -0.52
CSNK1G3-208ENST00000514131 POTEAQ6S8J7 498 aa11.78□□□□□ -0.52
CSNK1G3-208ENST00000514131 STAG2Q8N3U4 1231 aa11.78□□□□□ -0.52
CSNK1G3-208ENST00000514131 PRIMPOLQ96LW4 560 aa11.78□□□□□ -0.52
CSNK1G3-208ENST00000514131 SWI5Q1ZZU3 235 aa11.77□□□□□ -0.53
CSNK1G3-208ENST00000514131 C7orf43Q8WVR3 580 aa11.77□□□□□ -0.53
CSNK1G3-208ENST00000514131 PHACTR1Q9C0D0 580 aa11.77□□□□□ -0.53
CSNK1G3-208ENST00000514131 PRMT3O60678 531 aa11.76□□□□□ -0.53
CSNK1G3-208ENST00000514131 NLRP8Q86W28 1048 aa11.76□□□□□ -0.53
CSNK1G3-208ENST00000514131 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
CSNK1G3-208ENST00000514131 NGLY1Q96IV0 654 aa11.76□□□□□ -0.53
CSNK1G3-208ENST00000514131 ZCCHC2Q9C0B9 1178 aaKnown RBP11.76□□□□□ -0.53
CSNK1G3-208ENST00000514131 GJA3Q9Y6H8 435 aa11.76□□□□□ -0.53
CSNK1G3-208ENST00000514131 C1orf53Q5VUE5 145 aa11.75□□□□□ -0.53
CSNK1G3-208ENST00000514131 RHPN1Q8TCX5 695 aa11.75□□□□□ -0.53
CSNK1G3-208ENST00000514131 FIGNL1Q6PIW4 674 aa11.74□□□□□ -0.53
CSNK1G3-208ENST00000514131 LRRC69Q6ZNQ3 347 aa11.74□□□□□ -0.53
CSNK1G3-208ENST00000514131 ALDH16A1Q8IZ83 802 aa11.74□□□□□ -0.53
CSNK1G3-208ENST00000514131 NEUROD4Q9HD90 331 aa11.74□□□□□ -0.53
CSNK1G3-208ENST00000514131 BNIP3LO60238 219 aa11.73□□□□□ -0.53
CSNK1G3-208ENST00000514131 ABHD17AQ96GS6 310 aa11.73□□□□□ -0.53
CSNK1G3-208ENST00000514131 CFHR5Q9BXR6 569 aa11.73□□□□□ -0.53
CSNK1G3-208ENST00000514131 PCDHGC4Q9Y5F7 938 aa11.73□□□□□ -0.53
CSNK1G3-208ENST00000514131 ATXN7O15265 892 aaPredicted RBP11.72□□□□□ -0.53
CSNK1G3-208ENST00000514131 INSM1Q01101 510 aaPredicted RBP11.72□□□□□ -0.53
CSNK1G3-208ENST00000514131 OCLNQ16625 522 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms