RNA–Protein interactions for RNA: ENST00000514131.1

CSNK1G3-208, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 5

Gene CSNK1G3, Length 253 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-208ENST00000514131 AEBP2Q6ZN18 517 aaPredicted RBP33.9■■■■□ 3.02
CSNK1G3-208ENST00000514131 CHIC1Q5VXU3 224 aa33■■■□□ 2.87
CSNK1G3-208ENST00000514131 PHF23Q9BUL5 403 aaPredicted RBP29.05■■■□□ 2.24
CSNK1G3-208ENST00000514131 SENP3Q9H4L4 574 aaPredicted RBP28.75■■■□□ 2.19
CSNK1G3-208ENST00000514131 PLPPR3Q6T4P5 718 aa26.75■■□□□ 1.87
CSNK1G3-208ENST00000514131 FOXD1Q16676 465 aa26.73■■□□□ 1.87
CSNK1G3-208ENST00000514131 PPP6R1Q9UPN7 881 aa25.68■■□□□ 1.7
CSNK1G3-208ENST00000514131 ADRA2BP18089 450 aa25.67■■□□□ 1.7
CSNK1G3-208ENST00000514131 PIAS4Q8N2W9 510 aaPredicted RBP25.18■■□□□ 1.62
CSNK1G3-208ENST00000514131 MSH5O43196 834 aa24.64■■□□□ 1.54
CSNK1G3-208ENST00000514131 PPP4R3CPQ6ZMV5 832 aa23.59■■□□□ 1.37
CSNK1G3-208ENST00000514131 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
CSNK1G3-208ENST00000514131 MAPK8IP2Q13387 824 aaPredicted RBP23.32■■□□□ 1.32
CSNK1G3-208ENST00000514131 KCNA4P22459 653 aa22.97■■□□□ 1.27
CSNK1G3-208ENST00000514131 DMRT2Q9Y5R5 561 aa22.94■■□□□ 1.26
CSNK1G3-208ENST00000514131 NCBP3Q53F19 620 aaKnown RBP22.93■■□□□ 1.26
CSNK1G3-208ENST00000514131 CNKSR2Q8WXI2 1034 aa22.92■■□□□ 1.26
CSNK1G3-208ENST00000514131 NPM3O75607 178 aaKnown RBP22.62■■□□□ 1.21
CSNK1G3-208ENST00000514131 POTEDQ86YR6 584 aa22.62■■□□□ 1.21
CSNK1G3-208ENST00000514131 RNF216Q9NWF9 866 aaPredicted RBP22.49■■□□□ 1.19
CSNK1G3-208ENST00000514131 HOXD11P31277 338 aaPredicted RBP22.41■■□□□ 1.18
CSNK1G3-208ENST00000514131 DCAF8L1A6NGE4 600 aa22.02■■□□□ 1.12
CSNK1G3-208ENST00000514131 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
CSNK1G3-208ENST00000514131 SLC4A1APQ9BWU0 796 aaKnown RBP21.85■■□□□ 1.09
CSNK1G3-208ENST00000514131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.42■■□□□ 1.02
CSNK1G3-208ENST00000514131 SLC4A2P04920 1241 aa21.38■■□□□ 1.01
CSNK1G3-208ENST00000514131 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
CSNK1G3-208ENST00000514131 ZBTB22O15209 634 aa21.13■□□□□ 0.97
CSNK1G3-208ENST00000514131 RNF39Q9H2S5 420 aa21.12■□□□□ 0.97
CSNK1G3-208ENST00000514131 FOXD4L1Q9NU39 408 aa21.12■□□□□ 0.97
CSNK1G3-208ENST00000514131 U3KPZ7 1027 aaPredicted RBP21.04■□□□□ 0.96
CSNK1G3-208ENST00000514131 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
CSNK1G3-208ENST00000514131 MYCNP04198 464 aaPredicted RBP20.87■□□□□ 0.93
CSNK1G3-208ENST00000514131 C1QBPQ07021 282 aaKnown RBP20.85■□□□□ 0.93
CSNK1G3-208ENST00000514131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.71■□□□□ 0.91
CSNK1G3-208ENST00000514131 HNRNPUL2Q1KMD3 747 aaKnown RBP20.71■□□□□ 0.91
CSNK1G3-208ENST00000514131 CACNB1Q02641 598 aaPredicted RBP20.66■□□□□ 0.9
CSNK1G3-208ENST00000514131 SAMD1Q6SPF0 538 aaPredicted RBP20.65■□□□□ 0.9
CSNK1G3-208ENST00000514131 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
CSNK1G3-208ENST00000514131 APLP2Q06481 763 aa20.5■□□□□ 0.87
CSNK1G3-208ENST00000514131 CAPN15O75808 1086 aa20.43■□□□□ 0.86
CSNK1G3-208ENST00000514131 ATF5Q9Y2D1 282 aaPredicted RBP20.38■□□□□ 0.85
CSNK1G3-208ENST00000514131 ATXN8OSP0DMR3 200 aa20.37■□□□□ 0.85
CSNK1G3-208ENST00000514131 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
CSNK1G3-208ENST00000514131 ZNF219Q9P2Y4 722 aaPredicted RBP20.25■□□□□ 0.83
CSNK1G3-208ENST00000514131 DSG3P32926 999 aa20.08■□□□□ 0.81
CSNK1G3-208ENST00000514131 ABCB7O75027 752 aa20.04■□□□□ 0.8
CSNK1G3-208ENST00000514131 POLA2Q14181 598 aa19.97■□□□□ 0.79
CSNK1G3-208ENST00000514131 ZBTB12Q9Y330 459 aaPredicted RBP19.57■□□□□ 0.72
CSNK1G3-208ENST00000514131 FBLN2P98095 1184 aa19.49■□□□□ 0.71
CSNK1G3-208ENST00000514131 MKRN4PQ13434 485 aaPredicted RBP19.47■□□□□ 0.71
CSNK1G3-208ENST00000514131 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
CSNK1G3-208ENST00000514131 RBM42Q9BTD8 480 aaKnown RBP19.1■□□□□ 0.65
CSNK1G3-208ENST00000514131 SPDYE2BA6NHP3 402 aa19.04■□□□□ 0.64
CSNK1G3-208ENST00000514131 SPDYE6P0CI01 402 aa19.04■□□□□ 0.64
CSNK1G3-208ENST00000514131 SPDYE2Q495Y8 402 aa19.04■□□□□ 0.64
CSNK1G3-208ENST00000514131 ZNF692Q9BU19 519 aaPredicted RBP19■□□□□ 0.63
CSNK1G3-208ENST00000514131 SPDYE4A6NLX3 237 aa18.99■□□□□ 0.63
CSNK1G3-208ENST00000514131 FKBP8Q14318 412 aa18.94■□□□□ 0.62
CSNK1G3-208ENST00000514131 SSUH2Q9Y2M2 353 aa18.88■□□□□ 0.61
CSNK1G3-208ENST00000514131 AKT1S1Q96B36 256 aa18.86■□□□□ 0.61
CSNK1G3-208ENST00000514131 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
CSNK1G3-208ENST00000514131 REM2Q8IYK8 340 aaPredicted RBP18.72■□□□□ 0.59
CSNK1G3-208ENST00000514131 PROM2Q8N271 834 aa18.61■□□□□ 0.57
CSNK1G3-208ENST00000514131 SPDYE1Q8NFV5 336 aaPredicted RBP18.52■□□□□ 0.56
CSNK1G3-208ENST00000514131 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
CSNK1G3-208ENST00000514131 CLEC11AQ9Y240 323 aa18.48■□□□□ 0.55
CSNK1G3-208ENST00000514131 CHRDL2Q6WN34 429 aa18.38■□□□□ 0.53
CSNK1G3-208ENST00000514131 STAG3Q9UJ98 1225 aa18.37■□□□□ 0.53
CSNK1G3-208ENST00000514131 PRR29P0C7W0 189 aa18.28■□□□□ 0.52
CSNK1G3-208ENST00000514131 FBXO3Q9UK99 471 aa18.26■□□□□ 0.51
CSNK1G3-208ENST00000514131 FXR2P51116 673 aaKnown RBP eCLIP18.15■□□□□ 0.5
CSNK1G3-208ENST00000514131 PIP4P2Q8N4L2 257 aa18.13■□□□□ 0.49
CSNK1G3-208ENST00000514131 MIER1Q8N108 512 aa18.05■□□□□ 0.48
CSNK1G3-208ENST00000514131 PRKAR2AP13861 404 aaKnown RBP18.04■□□□□ 0.48
CSNK1G3-208ENST00000514131 CHADLQ6NUI6 762 aa18.04■□□□□ 0.48
CSNK1G3-208ENST00000514131 CREBZFQ9NS37 354 aa18.03■□□□□ 0.48
CSNK1G3-208ENST00000514131 VASPP50552 380 aaPredicted RBP18.02■□□□□ 0.48
CSNK1G3-208ENST00000514131 PLCD3Q8N3E9 789 aa17.99■□□□□ 0.47
CSNK1G3-208ENST00000514131 PLEKHG5O94827 1062 aa17.91■□□□□ 0.46
CSNK1G3-208ENST00000514131 POTEHQ6S545 545 aa17.89■□□□□ 0.45
CSNK1G3-208ENST00000514131 FARP1Q9Y4F1 1045 aaPredicted RBP17.84■□□□□ 0.45
CSNK1G3-208ENST00000514131 MNX1P50219 401 aaPredicted RBP17.82■□□□□ 0.44
CSNK1G3-208ENST00000514131 IFNLR1Q8IU57 520 aaPredicted RBP17.79■□□□□ 0.44
CSNK1G3-208ENST00000514131 KLHL34Q8N239 644 aa17.78■□□□□ 0.44
CSNK1G3-208ENST00000514131 ZBTB47Q9UFB7 747 aaPredicted RBP17.75■□□□□ 0.43
CSNK1G3-208ENST00000514131 NPM1P06748 294 aaKnown RBP eCLIP17.71■□□□□ 0.43
CSNK1G3-208ENST00000514131 HAX1O00165 279 aa17.6■□□□□ 0.41
CSNK1G3-208ENST00000514131 SPOCK2Q92563 424 aa17.58■□□□□ 0.4
CSNK1G3-208ENST00000514131 NUBP1P53384 320 aa17.56■□□□□ 0.4
CSNK1G3-208ENST00000514131 C19orf67A6NJJ6 358 aa17.54■□□□□ 0.4
CSNK1G3-208ENST00000514131 CD44P16070 742 aaKnown RBP17.52■□□□□ 0.4
CSNK1G3-208ENST00000514131 RASEFQ8IZ41 740 aa17.52■□□□□ 0.4
CSNK1G3-208ENST00000514131 TSPYL2Q9H2G4 693 aaPredicted RBP17.47■□□□□ 0.39
CSNK1G3-208ENST00000514131 EVX2Q03828 476 aa17.45■□□□□ 0.38
CSNK1G3-208ENST00000514131 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
CSNK1G3-208ENST00000514131 ZRANB1Q9UGI0 708 aa17.42■□□□□ 0.38
CSNK1G3-208ENST00000514131 DCAF8Q5TAQ9 597 aa17.41■□□□□ 0.38
CSNK1G3-208ENST00000514131 FAM212AQ96EL1 285 aa17.41■□□□□ 0.38
CSNK1G3-208ENST00000514131 CIZ1Q9ULV3 898 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms