RNA–Protein interactions for RNA: ENST00000513749.5

DDR1-274, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-274ENST00000513749 STARD3NLO95772 234 aa25.94■■□□□ 1.74
DDR1-274ENST00000513749 AK7Q96M32 723 aa25.94■■□□□ 1.74
DDR1-274ENST00000513749 LAS1LQ9Y4W2 734 aaKnown RBP25.94■■□□□ 1.74
DDR1-274ENST00000513749 USP16Q9Y5T5 823 aa25.94■■□□□ 1.74
DDR1-274ENST00000513749 RPS6KA4O75676 772 aa25.93■■□□□ 1.74
DDR1-274ENST00000513749 LAMB4A4D0S4 1761 aa25.92■■□□□ 1.74
DDR1-274ENST00000513749 SSFA2P28290 1259 aa25.92■■□□□ 1.74
DDR1-274ENST00000513749 PDGFDQ9GZP0 370 aaPredicted RBP25.92■■□□□ 1.74
DDR1-274ENST00000513749 CCDC87Q9NVE4 849 aa25.92■■□□□ 1.74
DDR1-274ENST00000513749 GNPATO15228 680 aa25.91■■□□□ 1.74
DDR1-274ENST00000513749 COL23A1Q86Y22 540 aaPredicted RBP25.9■■□□□ 1.74
DDR1-274ENST00000513749 FLAD1Q8NFF5 587 aa25.9■■□□□ 1.74
DDR1-274ENST00000513749 SPINK5Q9NQ38 1064 aaPredicted RBP25.9■■□□□ 1.74
DDR1-274ENST00000513749 ADRA2BP18089 450 aa25.89■■□□□ 1.74
DDR1-274ENST00000513749 ZBTB1Q9Y2K1 713 aa25.89■■□□□ 1.74
DDR1-274ENST00000513749 RTCBQ9Y3I0 505 aaKnown RBP25.89■■□□□ 1.74
DDR1-274ENST00000513749 SOS1Q07889 1333 aaPredicted RBP25.88■■□□□ 1.73
DDR1-274ENST00000513749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.88■■□□□ 1.73
DDR1-274ENST00000513749 HOXB7P09629 217 aa25.88■■□□□ 1.73
DDR1-274ENST00000513749 KRT24Q2M2I5 525 aa25.88■■□□□ 1.73
DDR1-274ENST00000513749 SMIM5Q71RC9 77 aa25.87■■□□□ 1.73
DDR1-274ENST00000513749 A1BGP04217 495 aa25.86■■□□□ 1.73
DDR1-274ENST00000513749 EIF5P55010 431 aaKnown RBP25.86■■□□□ 1.73
DDR1-274ENST00000513749 SLC16A10Q8TF71 515 aa25.85■■□□□ 1.73
DDR1-274ENST00000513749 TSR2Q969E8 191 aaKnown RBP25.85■■□□□ 1.73
DDR1-274ENST00000513749 COL24A1Q17RW2 1714 aa25.85■■□□□ 1.73
DDR1-274ENST00000513749 FANCIQ9NVI1 1328 aa25.85■■□□□ 1.73
DDR1-274ENST00000513749 NBPF26B4DH59 902 aa25.84■■□□□ 1.73
DDR1-274ENST00000513749 C4AP0C0L4 1744 aa25.84■■□□□ 1.73
DDR1-274ENST00000513749 IL6STP40189 918 aaPredicted RBP25.84■■□□□ 1.73
DDR1-274ENST00000513749 TRAPPC3LQ5T215 181 aa25.84■■□□□ 1.73
DDR1-274ENST00000513749 NBPF10Q6P3W6 841 aaKnown RBP25.84■■□□□ 1.73
DDR1-274ENST00000513749 NBPF15Q8N660 670 aa25.84■■□□□ 1.73
DDR1-274ENST00000513749 ARHGEF1Q92888 912 aaKnown RBP25.84■■□□□ 1.73
DDR1-274ENST00000513749 DUSP27Q5VZP5 1158 aa25.83■■□□□ 1.73
DDR1-274ENST00000513749 C8orf58Q8NAV2 365 aa25.83■■□□□ 1.73
DDR1-274ENST00000513749 PHF14O94880 888 aa25.82■■□□□ 1.72
DDR1-274ENST00000513749 GOLGA2Q08379 1002 aa25.82■■□□□ 1.72
DDR1-274ENST00000513749 ERBB4Q15303 1308 aa25.82■■□□□ 1.72
DDR1-274ENST00000513749 SRCAPQ6ZRS2 3230 aa25.81■■□□□ 1.72
DDR1-274ENST00000513749 CANXP27824 592 aaKnown RBP25.81■■□□□ 1.72
DDR1-274ENST00000513749 TRMT2AQ8IZ69 625 aaKnown RBP25.81■■□□□ 1.72
DDR1-274ENST00000513749 MYH16Q9H6N6 1097 aa25.81■■□□□ 1.72
DDR1-274ENST00000513749 COL15A1P39059 1388 aa25.81■■□□□ 1.72
DDR1-274ENST00000513749 SLFN5Q08AF3 891 aa25.8■■□□□ 1.72
DDR1-274ENST00000513749 PDIA6Q15084 440 aa25.8■■□□□ 1.72
DDR1-274ENST00000513749 LRP10Q7Z4F1 713 aa25.8■■□□□ 1.72
DDR1-274ENST00000513749 MTFR1LQ9H019 292 aa25.8■■□□□ 1.72
DDR1-274ENST00000513749 E9PSI1 815 aa25.79■■□□□ 1.72
DDR1-274ENST00000513749 TSPYL6Q8N831 410 aa25.79■■□□□ 1.72
DDR1-274ENST00000513749 HNRNPUQ00839 825 aaKnown RBP eCLIP25.78■■□□□ 1.72
DDR1-274ENST00000513749 PIP4K2AP48426 406 aaPredicted RBP25.77■■□□□ 1.72
DDR1-274ENST00000513749 SGIP1Q9BQI5 828 aa25.77■■□□□ 1.72
DDR1-274ENST00000513749 USP42Q9H9J4 1324 aaKnown RBP25.77■■□□□ 1.72
DDR1-274ENST00000513749 ZBTB7AO95365 584 aa25.76■■□□□ 1.71
DDR1-274ENST00000513749 EIF2S2P20042 333 aaKnown RBP25.76■■□□□ 1.71
DDR1-274ENST00000513749 RFC4P35249 363 aa25.76■■□□□ 1.71
DDR1-274ENST00000513749 CDCA7LQ96GN5 454 aa25.76■■□□□ 1.71
DDR1-274ENST00000513749 A0A087WZG4 1122 aa25.75■■□□□ 1.71
DDR1-274ENST00000513749 NARFQ9UHQ1 456 aa25.75■■□□□ 1.71
DDR1-274ENST00000513749 LRP5O75197 1615 aa25.74■■□□□ 1.71
DDR1-274ENST00000513749 ELL2O00472 640 aaPredicted RBP25.74■■□□□ 1.71
DDR1-274ENST00000513749 GYS1P13807 737 aa25.74■■□□□ 1.71
DDR1-274ENST00000513749 PTGER2P43116 358 aa25.74■■□□□ 1.71
DDR1-274ENST00000513749 EXOSC9Q06265 439 aaKnown RBP25.74■■□□□ 1.71
DDR1-274ENST00000513749 HDGFL1Q5TGJ6 251 aa25.74■■□□□ 1.71
DDR1-274ENST00000513749 ZBED9Q6R2W3 1325 aa25.73■■□□□ 1.71
DDR1-274ENST00000513749 MSH5O43196 834 aa25.73■■□□□ 1.71
DDR1-274ENST00000513749 PROSER3Q2NL68 480 aa25.73■■□□□ 1.71
DDR1-274ENST00000513749 TWISTNBQ3B726 338 aaPredicted RBP25.73■■□□□ 1.71
DDR1-274ENST00000513749 SPON1Q9HCB6 807 aa25.73■■□□□ 1.71
DDR1-274ENST00000513749 DDX21Q9NR30 783 aaKnown RBP eCLIP25.73■■□□□ 1.71
DDR1-274ENST00000513749 VAMP4O75379 141 aa25.72■■□□□ 1.71
DDR1-274ENST00000513749 BCL2L12Q9HB09 334 aa25.72■■□□□ 1.71
DDR1-274ENST00000513749 SRP68Q9UHB9 627 aaKnown RBP25.72■■□□□ 1.71
DDR1-274ENST00000513749 RGL2O15211 777 aa25.71■■□□□ 1.71
DDR1-274ENST00000513749 CHMP4AQ9BY43 222 aa25.71■■□□□ 1.71
DDR1-274ENST00000513749 CHPF2Q9P2E5 772 aa25.71■■□□□ 1.71
DDR1-274ENST00000513749 SCN7AQ01118 1682 aa25.71■■□□□ 1.71
DDR1-274ENST00000513749 BCORQ6W2J9 1755 aa25.7■■□□□ 1.7
DDR1-274ENST00000513749 CAMTA2O94983 1202 aa25.7■■□□□ 1.7
DDR1-274ENST00000513749 NECTIN2Q92692 538 aa25.7■■□□□ 1.7
DDR1-274ENST00000513749 DBF4Q9UBU7 674 aaPredicted RBP25.7■■□□□ 1.7
DDR1-274ENST00000513749 ATF5Q9Y2D1 282 aaPredicted RBP25.7■■□□□ 1.7
DDR1-274ENST00000513749 ZPR1O75312 459 aa25.69■■□□□ 1.7
DDR1-274ENST00000513749 MYL6BP14649 208 aa25.69■■□□□ 1.7
DDR1-274ENST00000513749 USPL1Q5W0Q7 1092 aa25.69■■□□□ 1.7
DDR1-274ENST00000513749 DZIP3Q86Y13 1208 aaKnown RBP25.69■■□□□ 1.7
DDR1-274ENST00000513749 NLGN1Q8N2Q7 840 aa25.69■■□□□ 1.7
DDR1-274ENST00000513749 TBC1D2BQ9UPU7 963 aa25.69■■□□□ 1.7
DDR1-274ENST00000513749 FKBP8Q14318 412 aa25.68■■□□□ 1.7
DDR1-274ENST00000513749 CCDC30Q5VVM6 783 aa25.68■■□□□ 1.7
DDR1-274ENST00000513749 ANXA1P04083 346 aa25.67■■□□□ 1.7
DDR1-274ENST00000513749 MSL1Q68DK7 614 aa25.67■■□□□ 1.7
DDR1-274ENST00000513749 ZNF330Q9Y3S2 320 aaPredicted RBP25.67■■□□□ 1.7
DDR1-274ENST00000513749 CACNA1FO60840 1977 aa25.66■■□□□ 1.7
DDR1-274ENST00000513749 NPM2Q86SE8 214 aaKnown RBP25.66■■□□□ 1.7
DDR1-274ENST00000513749 ERVV-1B6SEH8 477 aa25.65■■□□□ 1.7
DDR1-274ENST00000513749 TM4SF1P30408 202 aa25.65■■□□□ 1.7
DDR1-274ENST00000513749 CLEC4GQ6UXB4 293 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms